| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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197 genes differentially expressed following the trichostatin A-5935 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| ABCA7 | ATP-binding cassette, sub-family A (ABC1), member 7 |
| ACSBG1 | acyl-CoA synthetase bubblegum family member 1 |
| AHNAK2 | AHNAK nucleoprotein 2 |
| BAIAP3 | BAI1-associated protein 3 |
| CASC1 | cancer susceptibility candidate 1 |
| CCNA1 | cyclin A1 |
| CDH15 | cadherin 15, type 1, M-cadherin (myotubule) |
| CDH18 | cadherin 18, type 2 |
| CDKN1C | cyclin-dependent kinase inhibitor 1C (p57, Kip2) |
| CHAC1 | ChaC glutathione-specific gamma-glutamylcyclotransferase 1 |
| CLGN | calmegin |
| CLIP2 | CAP-GLY domain containing linker protein 2 |
| CLTCL1 | clathrin, heavy chain-like 1 |
| CRISPLD2 | cysteine-rich secretory protein LCCL domain containing 2 |
| CXADR | coxsackie virus and adenovirus receptor |
| CYLD | cylindromatosis (turban tumor syndrome) |
| CYP46A1 | cytochrome P450, family 46, subfamily A, polypeptide 1 |
| CYP4F2 | cytochrome P450, family 4, subfamily F, polypeptide 2 |
| DENND3 | DENN/MADD domain containing 3 |
| DHRS2 | dehydrogenase/reductase (SDR family) member 2 |
| EFNA3 | ephrin-A3 |
| ENPP2 | ectonucleotide pyrophosphatase/phosphodiesterase 2 |
| EPOR | erythropoietin receptor |
| FAM134B | family with sequence similarity 134, member B |
| FAM13A | family with sequence similarity 13, member A |
| FAM46C | family with sequence similarity 46, member C |
| FSCN1 | fascin actin-bundling protein 1 |
| FYN | FYN proto-oncogene, Src family tyrosine kinase |
| GEM | GTP binding protein overexpressed in skeletal muscle |
| GFPT2 | glutamine-fructose-6-phosphate transaminase 2 |
| GLDC | glycine dehydrogenase (decarboxylating) |
| GLRX | glutaredoxin (thioltransferase) |
| GMPR | guanosine monophosphate reductase |
| GOSR2 | golgi SNAP receptor complex member 2 |
| GPR20 | G protein-coupled receptor 20 |
| GTF2B | general transcription factor IIB |
| HEY1 | hes-related family bHLH transcription factor with YRPW motif 1 |
| HYAL1 | hyaluronoglucosaminidase 1 |
| KIAA1462 | KIAA1462 |
| KIF21B | kinesin family member 21B |
| LIMA1 | LIM domain and actin binding 1 |
| LMCD1 | LIM and cysteine-rich domains 1 |
| MAF | v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog |
| MAP1A | microtubule-associated protein 1A |
| MAP3K13 | mitogen-activated protein kinase kinase kinase 13 |
| MAPRE2 | microtubule-associated protein, RP/EB family, member 2 |
| NAP1L3 | nucleosome assembly protein 1-like 3 |
| NPC1 | Niemann-Pick disease, type C1 |
| NR4A3 | nuclear receptor subfamily 4, group A, member 3 |
| NRTN | neurturin |
| NXN | nucleoredoxin |
| OASL | 2'-5'-oligoadenylate synthetase-like |
| PADI3 | peptidyl arginine deiminase, type III |
| PBXIP1 | pre-B-cell leukemia homeobox interacting protein 1 |
| PCLO | piccolo presynaptic cytomatrix protein |
| PDE4DIP | phosphodiesterase 4D interacting protein |
| PEG10 | paternally expressed 10 |
| PIK3CD | phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit delta |
| PKNOX2 | PBX/knotted 1 homeobox 2 |
| PLEKHO2 | pleckstrin homology domain containing, family O member 2 |
| PRPH | peripherin |
| PSMB9 | proteasome (prosome, macropain) subunit, beta type, 9 |
| RAI2 | retinoic acid induced 2 |
| RGCC | regulator of cell cycle |
| RGL1 | ral guanine nucleotide dissociation stimulator-like 1 |
| RGS2 | regulator of G-protein signaling 2 |
| RND1 | Rho family GTPase 1 |
| RPL3L | ribosomal protein L3-like |
| RPS6KA2 | ribosomal protein S6 kinase, 90kDa, polypeptide 2 |
| RUNDC3B | RUN domain containing 3B |
| SEPP1 | selenoprotein P, plasma, 1 |
| SERPINB5 | serpin peptidase inhibitor, clade B (ovalbumin), member 5 |
| SERPINB9 | serpin peptidase inhibitor, clade B (ovalbumin), member 9 |
| SERPINI1 | serpin peptidase inhibitor, clade I (neuroserpin), member 1 |
| SH3GL3 | SH3-domain GRB2-like 3 |
| SIRT4 | sirtuin 4 |
| SLC17A7 | solute carrier family 17 (vesicular glutamate transporter), member 7 |
| SNAI2 | snail family zinc finger 2 |
| SRGAP3 | SLIT-ROBO Rho GTPase activating protein 3 |
| SYT11 | synaptotagmin XI |
| TDRKH | tudor and KH domain containing |
| TIMP3 | TIMP metallopeptidase inhibitor 3 |
| TMCC2 | transmembrane and coiled-coil domain family 2 |
| TPMT | thiopurine S-methyltransferase |
| TTLL7 | tubulin tyrosine ligase-like family member 7 |
| TUFT1 | tuftelin 1 |
| TXNIP | thioredoxin interacting protein |
| VAMP1 | vesicle-associated membrane protein 1 (synaptobrevin 1) |
| VWA5A | von Willebrand factor A domain containing 5A |
| WDR47 | WD repeat domain 47 |
| YPEL1 | yippee-like 1 (Drosophila) |
| ZCCHC24 | zinc finger, CCHC domain containing 24 |
| ZDHHC11 | zinc finger, DHHC-type containing 11 |
| ZEB1 | zinc finger E-box binding homeobox 1 |
| ZHX3 | zinc fingers and homeoboxes 3 |
| ZNF10 | zinc finger protein 10 |
| ZNF204P | zinc finger protein 204, pseudogene |
| ZNF230 | zinc finger protein 230 |
| Symbol | Name |
|---|---|
| ACKR3 | atypical chemokine receptor 3 |
| ACTR8 | ARP8 actin-related protein 8 homolog (yeast) |
| ACVR2B | activin A receptor, type IIB |
| ADNP | activity-dependent neuroprotector homeobox |
| AMIGO2 | adhesion molecule with Ig-like domain 2 |
| AP5S1 | adaptor-related protein complex 5, sigma 1 subunit |
| ARHGEF16 | Rho guanine nucleotide exchange factor (GEF) 16 |
| ARTN | artemin |
| BEGAIN | brain-enriched guanylate kinase-associated |
| BRINP3 | bone morphogenetic protein/retinoic acid inducible neural-specific 3 |
| C9ORF9 | chromosome 9 open reading frame 9 |
| CALHM2 | calcium homeostasis modulator 2 |
| CBFA2T3 | core-binding factor, runt domain, alpha subunit 2; translocated to, 3 |
| CBR3 | carbonyl reductase 3 |
| CCDC94 | coiled-coil domain containing 94 |
| CCND1 | cyclin D1 |
| CHST10 | carbohydrate sulfotransferase 10 |
| COIL | coilin |
| CRMP1 | collapsin response mediator protein 1 |
| CTCF | CCCTC-binding factor (zinc finger protein) |
| DEPDC1 | DEP domain containing 1 |
| DKK1 | dickkopf WNT signaling pathway inhibitor 1 |
| DNAAF2 | dynein, axonemal, assembly factor 2 |
| DSCAM | Down syndrome cell adhesion molecule |
| EFNA1 | ephrin-A1 |
| EGR3 | early growth response 3 |
| FAM57A | family with sequence similarity 57, member A |
| FGD1 | FYVE, RhoGEF and PH domain containing 1 |
| FJX1 | four jointed box 1 (Drosophila) |
| FOXA1 | forkhead box A1 |
| GABPA | GA binding protein transcription factor, alpha subunit 60kDa |
| GABPB1 | GA binding protein transcription factor, beta subunit 1 |
| GATA4 | GATA binding protein 4 |
| GPR87 | G protein-coupled receptor 87 |
| GPRC5C | G protein-coupled receptor, class C, group 5, member C |
| GTF2IRD1 | GTF2I repeat domain containing 1 |
| HDAC7 | histone deacetylase 7 |
| HIVEP1 | human immunodeficiency virus type I enhancer binding protein 1 |
| HOXC11 | homeobox C11 |
| IFNGR2 | interferon gamma receptor 2 (interferon gamma transducer 1) |
| IL15RA | interleukin 15 receptor, alpha |
| INHBB | inhibin, beta B |
| IRF2 | interferon regulatory factor 2 |
| IRS1 | insulin receptor substrate 1 |
| IRX5 | iroquois homeobox 5 |
| ITPKB | inositol-trisphosphate 3-kinase B |
| KCTD15 | potassium channel tetramerization domain containing 15 |
| KDM8 | lysine (K)-specific demethylase 8 |
| KIAA0125 | KIAA0125 |
| LMNB1 | lamin B1 |
| LY6G5C | lymphocyte antigen 6 complex, locus G5C |
| MC1R | melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor) |
| MEPCE | methylphosphate capping enzyme |
| METTL4 | methyltransferase like 4 |
| MSL1 | male-specific lethal 1 homolog (Drosophila) |
| MYC | v-myc avian myelocytomatosis viral oncogene homolog |
| N4BP2L2-IT2 | N4BPL2 intronic transcript 2 |
| NOD1 | nucleotide-binding oligomerization domain containing 1 |
| NPY1R | neuropeptide Y receptor Y1 |
| NRIP1 | nuclear receptor interacting protein 1 |
| NUAK1 | NUAK family, SNF1-like kinase, 1 |
| P2RY6 | pyrimidinergic receptor P2Y, G-protein coupled, 6 |
| PDGFA | platelet-derived growth factor alpha polypeptide |
| PGGT1B | protein geranylgeranyltransferase type I, beta subunit |
| PHEX | phosphate regulating endopeptidase homolog, X-linked |
| PHLDA3 | pleckstrin homology-like domain, family A, member 3 |
| POGK | pogo transposable element with KRAB domain |
| PRR15L | proline rich 15-like |
| PTPN9 | protein tyrosine phosphatase, non-receptor type 9 |
| R3HCC1L | R3H domain and coiled-coil containing 1-like |
| RASGRP1 | RAS guanyl releasing protein 1 (calcium and DAG-regulated) |
| RBM23 | RNA binding motif protein 23 |
| SEMA4C | sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C |
| SETD1B | SET domain containing 1B |
| SFMBT1 | Scm-like with four mbt domains 1 |
| SLC6A14 | solute carrier family 6 (amino acid transporter), member 14 |
| SMAD7 | SMAD family member 7 |
| SNHG3 | small nucleolar RNA host gene 3 |
| SREK1 | splicing regulatory glutamine/lysine-rich protein 1 |
| SRSF4 | serine/arginine-rich splicing factor 4 |
| STC2 | stanniocalcin 2 |
| TGIF1 | TGFB-induced factor homeobox 1 |
| TNFRSF1A | tumor necrosis factor receptor superfamily, member 1A |
| TRIB1 | tribbles pseudokinase 1 |
| TRIB3 | tribbles pseudokinase 3 |
| TRIM16 | tripartite motif containing 16 |
| TRIM8 | tripartite motif containing 8 |
| TSKU | tsukushi, small leucine rich proteoglycan |
| VPS54 | vacuolar protein sorting 54 homolog (S. cerevisiae) |
| XBP1 | X-box binding protein 1 |
| ZBTB1 | zinc finger and BTB domain containing 1 |
| ZC3H4 | zinc finger CCCH-type containing 4 |
| ZHX2 | zinc fingers and homeoboxes 2 |
| ZIC1 | Zic family member 1 |
| ZNF573 | zinc finger protein 573 |
| ZNF668 | zinc finger protein 668 |
| ZNF692 | zinc finger protein 692 |
| ZNF787 | zinc finger protein 787 |
| ZNHIT2 | zinc finger, HIT-type containing 2 |
