| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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200 genes differentially expressed following the trichostatin A-6316 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| ABCG1 | ATP-binding cassette, sub-family G (WHITE), member 1 |
| ADM | adrenomedullin |
| ADRB2 | adrenoceptor beta 2, surface |
| AGTR1 | angiotensin II receptor, type 1 |
| AQP3 | aquaporin 3 (Gill blood group) |
| ARG2 | arginase 2 |
| ARHGAP6 | Rho GTPase activating protein 6 |
| ASMTL | acetylserotonin O-methyltransferase-like |
| AVPI1 | arginine vasopressin-induced 1 |
| BAMBI | BMP and activin membrane-bound inhibitor |
| BIRC3 | baculoviral IAP repeat containing 3 |
| BRINP2 | bone morphogenetic protein/retinoic acid inducible neural-specific 2 |
| C18ORF8 | chromosome 18 open reading frame 8 |
| C1ORF116 | chromosome 1 open reading frame 116 |
| CA5B | carbonic anhydrase VB, mitochondrial |
| CCNA1 | cyclin A1 |
| CDC42EP3 | CDC42 effector protein (Rho GTPase binding) 3 |
| CDKN1A | cyclin-dependent kinase inhibitor 1A (p21, Cip1) |
| CDKN2D | cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) |
| CFAP69 | cilia and flagella associated protein 69 |
| CITED2 | Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 |
| CLDN1 | claudin 1 |
| CRISPLD2 | cysteine-rich secretory protein LCCL domain containing 2 |
| CTGF | connective tissue growth factor |
| CTH | cystathionine gamma-lyase |
| CTNS | cystinosin, lysosomal cystine transporter |
| CXCR4 | chemokine (C-X-C motif) receptor 4 |
| CYP39A1 | cytochrome P450, family 39, subfamily A, polypeptide 1 |
| CYR61 | cysteine-rich, angiogenic inducer, 61 |
| DNAJC12 | DnaJ (Hsp40) homolog, subfamily C, member 12 |
| DNAJC6 | DnaJ (Hsp40) homolog, subfamily C, member 6 |
| DUSP1 | dual specificity phosphatase 1 |
| DUSP10 | dual specificity phosphatase 10 |
| DUSP5 | dual specificity phosphatase 5 |
| EFNA3 | ephrin-A3 |
| ELF3 | E74-like factor 3 (ets domain transcription factor, epithelial-specific ) |
| EPPK1 | epiplakin 1 |
| FABP4 | fatty acid binding protein 4, adipocyte |
| FAM69A | family with sequence similarity 69, member A |
| FLRT3 | fibronectin leucine rich transmembrane protein 3 |
| FYN | FYN proto-oncogene, Src family tyrosine kinase |
| GABARAPL1 | GABA(A) receptor-associated protein like 1 |
| GLCE | glucuronic acid epimerase |
| GLS | glutaminase |
| GPRC5A | G protein-coupled receptor, class C, group 5, member A |
| GTF2B | general transcription factor IIB |
| H1FX | H1 histone family, member X |
| HOXA1 | homeobox A1 |
| IRF6 | interferon regulatory factor 6 |
| KCNJ2 | potassium channel, inwardly rectifying subfamily J, member 2 |
| KIAA0895 | KIAA0895 |
| KIAA0922 | KIAA0922 |
| KIF5C | kinesin family member 5C |
| LINC00341 | long intergenic non-protein coding RNA 341 |
| LMCD1 | LIM and cysteine-rich domains 1 |
| LPPR4 | lipid phosphate phosphatase-related protein type 4 |
| MAK | male germ cell-associated kinase |
| MAP2K3 | mitogen-activated protein kinase kinase 3 |
| MCTP1 | multiple C2 domains, transmembrane 1 |
| MERTK | MER proto-oncogene, tyrosine kinase |
| MLF1 | myeloid leukemia factor 1 |
| MMP1 | matrix metallopeptidase 1 |
| NBEA | neurobeachin |
| NEAT1 | nuclear paraspeckle assembly transcript 1 (non-protein coding) |
| NEDD4L | neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase |
| NEDD9 | neural precursor cell expressed, developmentally down-regulated 9 |
| NME5 | NME/NM23 family member 5 |
| NRXN3 | neurexin 3 |
| PAIP2B | poly(A) binding protein interacting protein 2B |
| PCDH9 | protocadherin 9 |
| PDE4DIP | phosphodiesterase 4D interacting protein |
| PI4K2A | phosphatidylinositol 4-kinase type 2 alpha |
| PKP2 | plakophilin 2 |
| PPL | periplakin |
| PRKAR2B | protein kinase, cAMP-dependent, regulatory, type II, beta |
| PTCH1 | patched 1 |
| PTGER4 | prostaglandin E receptor 4 (subtype EP4) |
| RAB11FIP1 | RAB11 family interacting protein 1 (class I) |
| RAI2 | retinoic acid induced 2 |
| RGCC | regulator of cell cycle |
| RGL1 | ral guanine nucleotide dissociation stimulator-like 1 |
| RGS4 | regulator of G-protein signaling 4 |
| RNF24 | ring finger protein 24 |
| SAT1 | spermidine/spermine N1-acetyltransferase 1 |
| SERPINI1 | serpin peptidase inhibitor, clade I (neuroserpin), member 1 |
| SH3GL3 | SH3-domain GRB2-like 3 |
| SLC25A44 | solute carrier family 25, member 44 |
| SLC30A1 | solute carrier family 30 (zinc transporter), member 1 |
| SNAPC1 | small nuclear RNA activating complex, polypeptide 1, 43kDa |
| SQLE | squalene epoxidase |
| ST3GAL5 | ST3 beta-galactoside alpha-2,3-sialyltransferase 5 |
| STC1 | stanniocalcin 1 |
| STON1 | stonin 1 |
| SYT1 | synaptotagmin I |
| TMSB15A | thymosin beta 15a |
| TPMT | thiopurine S-methyltransferase |
| TRAFD1 | TRAF-type zinc finger domain containing 1 |
| TUBB2B | tubulin, beta 2B class IIb |
| TUFT1 | tuftelin 1 |
| UGCG | UDP-glucose ceramide glucosyltransferase |
| Symbol | Name |
|---|---|
| ADNP | activity-dependent neuroprotector homeobox |
| AP5S1 | adaptor-related protein complex 5, sigma 1 subunit |
| ARMC6 | armadillo repeat containing 6 |
| ATF1 | activating transcription factor 1 |
| BCAR3 | breast cancer anti-estrogen resistance 3 |
| BCL7A | B-cell CLL/lymphoma 7A |
| C19ORF54 | chromosome 19 open reading frame 54 |
| C9ORF91 | chromosome 9 open reading frame 91 |
| CASD1 | CAS1 domain containing 1 |
| CCDC59 | coiled-coil domain containing 59 |
| CLCF1 | cardiotrophin-like cytokine factor 1 |
| COA7 | cytochrome c oxidase assembly factor 7 (putative) |
| COIL | coilin |
| COQ4 | coenzyme Q4 |
| CUL1 | cullin 1 |
| DENND4B | DENN/MADD domain containing 4B |
| DEPDC1 | DEP domain containing 1 |
| DNAJC7 | DnaJ (Hsp40) homolog, subfamily C, member 7 |
| E2F8 | E2F transcription factor 8 |
| E4F1 | E4F transcription factor 1 |
| EOGT | EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase |
| FJX1 | four jointed box 1 (Drosophila) |
| FOSL1 | FOS-like antigen 1 |
| FOXA1 | forkhead box A1 |
| FST | follistatin |
| GBX2 | gastrulation brain homeobox 2 |
| H2AFY2 | H2A histone family, member Y2 |
| HARS2 | histidyl-tRNA synthetase 2, mitochondrial |
| HAS2 | hyaluronan synthase 2 |
| HIRIP3 | HIRA interacting protein 3 |
| HIVEP2 | human immunodeficiency virus type I enhancer binding protein 2 |
| HMGA2 | high mobility group AT-hook 2 |
| HMGXB4 | HMG box domain containing 4 |
| IL7R | interleukin 7 receptor |
| INHBB | inhibin, beta B |
| INPP5E | inositol polyphosphate-5-phosphatase, 72 kDa |
| KAT6B | K(lysine) acetyltransferase 6B |
| KBTBD4 | kelch repeat and BTB (POZ) domain containing 4 |
| KEAP1 | kelch-like ECH-associated protein 1 |
| LIF | leukemia inhibitory factor |
| LINC00339 | long intergenic non-protein coding RNA 339 |
| LMNB1 | lamin B1 |
| LPAR1 | lysophosphatidic acid receptor 1 |
| LRRC41 | leucine rich repeat containing 41 |
| LUC7L2 | LUC7-like 2 (S. cerevisiae) |
| MALL | mal, T-cell differentiation protein-like |
| MAP3K6 | mitogen-activated protein kinase kinase kinase 6 |
| MCM9 | minichromosome maintenance complex component 9 |
| MCRS1 | microspherule protein 1 |
| MEPCE | methylphosphate capping enzyme |
| METTL1 | methyltransferase like 1 |
| MSL1 | male-specific lethal 1 homolog (Drosophila) |
| MTPAP | mitochondrial poly(A) polymerase |
| MYD88 | myeloid differentiation primary response 88 |
| NLRX1 | NLR family member X1 |
| NME6 | NME/NM23 nucleoside diphosphate kinase 6 |
| NR1H2 | nuclear receptor subfamily 1, group H, member 2 |
| NR2C2 | nuclear receptor subfamily 2, group C, member 2 |
| NRIP1 | nuclear receptor interacting protein 1 |
| PALMD | palmdelphin |
| PARP4 | poly (ADP-ribose) polymerase family, member 4 |
| PCNT | pericentrin |
| PDK1 | pyruvate dehydrogenase kinase, isozyme 1 |
| PHF11 | PHD finger protein 11 |
| PLEKHA2 | pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2 |
| PLK1 | polo-like kinase 1 |
| POGK | pogo transposable element with KRAB domain |
| PPAN | peter pan homolog (Drosophila) |
| PPAP2B | phosphatidic acid phosphatase type 2B |
| PPRC1 | peroxisome proliferator-activated receptor gamma, coactivator-related 1 |
| QTRT1 | queuine tRNA-ribosyltransferase 1 |
| RASSF1 | Ras association (RalGDS/AF-6) domain family member 1 |
| RCBTB2 | regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 |
| RGS19 | regulator of G-protein signaling 19 |
| RIN2 | Ras and Rab interactor 2 |
| SCAF8 | SR-related CTD-associated factor 8 |
| SERPINH1 | serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1) |
| SETBP1 | SET binding protein 1 |
| SFMBT1 | Scm-like with four mbt domains 1 |
| SIM2 | single-minded family bHLH transcription factor 2 |
| SLC14A1 | solute carrier family 14 (urea transporter), member 1 (Kidd blood group) |
| SLC29A3 | solute carrier family 29 (equilibrative nucleoside transporter), member 3 |
| SRSF4 | serine/arginine-rich splicing factor 4 |
| STAG1 | stromal antigen 1 |
| STXBP3 | syntaxin binding protein 3 |
| SUV39H1 | suppressor of variegation 3-9 homolog 1 (Drosophila) |
| SUV420H1 | suppressor of variegation 4-20 homolog 1 (Drosophila) |
| TGFB1I1 | transforming growth factor beta 1 induced transcript 1 |
| TMEM11 | transmembrane protein 11 |
| TNFRSF12A | tumor necrosis factor receptor superfamily, member 12A |
| TRIB3 | tribbles pseudokinase 3 |
| TRIM16 | tripartite motif containing 16 |
| UBXN8 | UBX domain protein 8 |
| USP21 | ubiquitin specific peptidase 21 |
| VEGFC | vascular endothelial growth factor C |
| WDR74 | WD repeat domain 74 |
| ZBED1 | zinc finger, BED-type containing 1 |
| ZC3H4 | zinc finger CCCH-type containing 4 |
| ZNF165 | zinc finger protein 165 |
| ZNF787 | zinc finger protein 787 |
