| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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200 genes differentially expressed following the trichostatin A-6546 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| ABHD2 | abhydrolase domain containing 2 |
| ABTB2 | ankyrin repeat and BTB (POZ) domain containing 2 |
| ADGRB2 | adhesion G protein-coupled receptor B2 |
| AGTR1 | angiotensin II receptor, type 1 |
| AKAP13 | A kinase (PRKA) anchor protein 13 |
| ANGPTL4 | angiopoietin-like 4 |
| AQP3 | aquaporin 3 (Gill blood group) |
| ARG2 | arginase 2 |
| ARNTL | aryl hydrocarbon receptor nuclear translocator-like |
| ASMTL | acetylserotonin O-methyltransferase-like |
| AVPI1 | arginine vasopressin-induced 1 |
| BAIAP2 | BAI1-associated protein 2 |
| BAMBI | BMP and activin membrane-bound inhibitor |
| BIRC3 | baculoviral IAP repeat containing 3 |
| CCNA1 | cyclin A1 |
| CCSER2 | coiled-coil serine-rich protein 2 |
| CDC42EP3 | CDC42 effector protein (Rho GTPase binding) 3 |
| CDKN1A | cyclin-dependent kinase inhibitor 1A (p21, Cip1) |
| CDKN2D | cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) |
| CITED2 | Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 |
| CORO1A | coronin, actin binding protein, 1A |
| CPM | carboxypeptidase M |
| CREB3L1 | cAMP responsive element binding protein 3-like 1 |
| CRISPLD2 | cysteine-rich secretory protein LCCL domain containing 2 |
| CTGF | connective tissue growth factor |
| CTH | cystathionine gamma-lyase |
| CYR61 | cysteine-rich, angiogenic inducer, 61 |
| DDIT4 | DNA-damage-inducible transcript 4 |
| DENND3 | DENN/MADD domain containing 3 |
| DNAJB1 | DnaJ (Hsp40) homolog, subfamily B, member 1 |
| DNAJC12 | DnaJ (Hsp40) homolog, subfamily C, member 12 |
| DUSP1 | dual specificity phosphatase 1 |
| DUSP10 | dual specificity phosphatase 10 |
| EFNB2 | ephrin-B2 |
| ELF3 | E74-like factor 3 (ets domain transcription factor, epithelial-specific ) |
| EPHB2 | EPH receptor B2 |
| EPHB3 | EPH receptor B3 |
| EPPK1 | epiplakin 1 |
| FABP4 | fatty acid binding protein 4, adipocyte |
| FYN | FYN proto-oncogene, Src family tyrosine kinase |
| GABARAPL1 | GABA(A) receptor-associated protein like 1 |
| GCDH | glutaryl-CoA dehydrogenase |
| GLS | glutaminase |
| GMPR | guanosine monophosphate reductase |
| GTF2B | general transcription factor IIB |
| GUCY1B3 | guanylate cyclase 1, soluble, beta 3 |
| H1FX | H1 histone family, member X |
| HMOX1 | heme oxygenase 1 |
| HOXA1 | homeobox A1 |
| INSIG1 | insulin induced gene 1 |
| JUNB | jun B proto-oncogene |
| KCNJ2 | potassium channel, inwardly rectifying subfamily J, member 2 |
| KCNS3 | potassium voltage-gated channel, modifier subfamily S, member 3 |
| KIF13B | kinesin family member 13B |
| KIF5C | kinesin family member 5C |
| LINC00341 | long intergenic non-protein coding RNA 341 |
| LPIN1 | lipin 1 |
| MAX | MYC associated factor X |
| MLF1 | myeloid leukemia factor 1 |
| MLLT3 | myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 |
| MMP1 | matrix metallopeptidase 1 |
| NEAT1 | nuclear paraspeckle assembly transcript 1 (non-protein coding) |
| NEDD9 | neural precursor cell expressed, developmentally down-regulated 9 |
| NEU1 | sialidase 1 (lysosomal sialidase) |
| NPC1 | Niemann-Pick disease, type C1 |
| NR4A1 | nuclear receptor subfamily 4, group A, member 1 |
| NR4A2 | nuclear receptor subfamily 4, group A, member 2 |
| NRXN3 | neurexin 3 |
| OASL | 2'-5'-oligoadenylate synthetase-like |
| PCDH9 | protocadherin 9 |
| PDE4DIP | phosphodiesterase 4D interacting protein |
| PIP5K1A | phosphatidylinositol-4-phosphate 5-kinase, type I, alpha |
| PPL | periplakin |
| PPP3R1 | protein phosphatase 3, regulatory subunit B, alpha |
| PTPN1 | protein tyrosine phosphatase, non-receptor type 1 |
| RAB11FIP1 | RAB11 family interacting protein 1 (class I) |
| RGL1 | ral guanine nucleotide dissociation stimulator-like 1 |
| RGS4 | regulator of G-protein signaling 4 |
| RNF24 | ring finger protein 24 |
| RPS6KA2 | ribosomal protein S6 kinase, 90kDa, polypeptide 2 |
| RWDD2A | RWD domain containing 2A |
| SAT1 | spermidine/spermine N1-acetyltransferase 1 |
| SERPINI1 | serpin peptidase inhibitor, clade I (neuroserpin), member 1 |
| SH3GL3 | SH3-domain GRB2-like 3 |
| SLC30A1 | solute carrier family 30 (zinc transporter), member 1 |
| ST3GAL5 | ST3 beta-galactoside alpha-2,3-sialyltransferase 5 |
| STC1 | stanniocalcin 1 |
| STK4 | serine/threonine kinase 4 |
| STOM | stomatin |
| STON1 | stonin 1 |
| SYT1 | synaptotagmin I |
| SYT11 | synaptotagmin XI |
| TJP3 | tight junction protein 3 |
| TRIM9 | tripartite motif containing 9 |
| TUBB2B | tubulin, beta 2B class IIb |
| TUFT1 | tuftelin 1 |
| TXNIP | thioredoxin interacting protein |
| UAP1L1 | UDP-N-acetylglucosamine pyrophosphorylase 1 like 1 |
| ZFP36 | ZFP36 ring finger protein |
| ZNF79 | zinc finger protein 79 |
| Symbol | Name |
|---|---|
| ACTR8 | ARP8 actin-related protein 8 homolog (yeast) |
| ADNP | activity-dependent neuroprotector homeobox |
| AKAP8 | A kinase (PRKA) anchor protein 8 |
| AP5S1 | adaptor-related protein complex 5, sigma 1 subunit |
| ARSJ | arylsulfatase family, member J |
| BANP | BTG3 associated nuclear protein |
| BCAR3 | breast cancer anti-estrogen resistance 3 |
| BRD1 | bromodomain containing 1 |
| C1ORF216 | chromosome 1 open reading frame 216 |
| C9ORF91 | chromosome 9 open reading frame 91 |
| CAND2 | cullin-associated and neddylation-dissociated 2 (putative) |
| CASD1 | CAS1 domain containing 1 |
| CBR3 | carbonyl reductase 3 |
| CLCF1 | cardiotrophin-like cytokine factor 1 |
| COIL | coilin |
| CTCF | CCCTC-binding factor (zinc finger protein) |
| CTDSP1 | CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 |
| CUL1 | cullin 1 |
| DUSP4 | dual specificity phosphatase 4 |
| E2F8 | E2F transcription factor 8 |
| EGF | epidermal growth factor |
| EOGT | EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase |
| FADD | Fas (TNFRSF6)-associated via death domain |
| FAM57A | family with sequence similarity 57, member A |
| FJX1 | four jointed box 1 (Drosophila) |
| FOSL1 | FOS-like antigen 1 |
| FOXA1 | forkhead box A1 |
| FST | follistatin |
| GBX2 | gastrulation brain homeobox 2 |
| GIN1 | gypsy retrotransposon integrase 1 |
| GPR87 | G protein-coupled receptor 87 |
| GPRC5C | G protein-coupled receptor, class C, group 5, member C |
| H2AFY2 | H2A histone family, member Y2 |
| HAS2 | hyaluronan synthase 2 |
| HIRIP3 | HIRA interacting protein 3 |
| HMGA2 | high mobility group AT-hook 2 |
| HOXA10 | homeobox A10 |
| INHBB | inhibin, beta B |
| IRS1 | insulin receptor substrate 1 |
| ITPKB | inositol-trisphosphate 3-kinase B |
| KCTD15 | potassium channel tetramerization domain containing 15 |
| KEAP1 | kelch-like ECH-associated protein 1 |
| LIF | leukemia inhibitory factor |
| LMNB1 | lamin B1 |
| LPAR1 | lysophosphatidic acid receptor 1 |
| LRIF1 | ligand dependent nuclear receptor interacting factor 1 |
| LUC7L2 | LUC7-like 2 (S. cerevisiae) |
| MCRS1 | microspherule protein 1 |
| MEPCE | methylphosphate capping enzyme |
| MLPH | melanophilin |
| MMACHC | methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria |
| MSL1 | male-specific lethal 1 homolog (Drosophila) |
| MTRF1 | mitochondrial translational release factor 1 |
| NFIC | nuclear factor I/C (CCAAT-binding transcription factor) |
| NMI | N-myc (and STAT) interactor |
| NRIP1 | nuclear receptor interacting protein 1 |
| PARP12 | poly (ADP-ribose) polymerase family, member 12 |
| PLAU | plasminogen activator, urokinase |
| PPAP2B | phosphatidic acid phosphatase type 2B |
| PTPN9 | protein tyrosine phosphatase, non-receptor type 9 |
| PXDC1 | PX domain containing 1 |
| RBM23 | RNA binding motif protein 23 |
| RIN2 | Ras and Rab interactor 2 |
| RPAP1 | RNA polymerase II associated protein 1 |
| S100A4 | S100 calcium binding protein A4 |
| SCAF8 | SR-related CTD-associated factor 8 |
| SERPINH1 | serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1) |
| SETD1B | SET domain containing 1B |
| SETMAR | SET domain and mariner transposase fusion gene |
| SH2D4A | SH2 domain containing 4A |
| SLC2A10 | solute carrier family 2 (facilitated glucose transporter), member 10 |
| SLC35F2 | solute carrier family 35, member F2 |
| SLC37A1 | solute carrier family 37 (glucose-6-phosphate transporter), member 1 |
| SLC4A3 | solute carrier family 4 (anion exchanger), member 3 |
| SLTM | SAFB-like, transcription modulator |
| SMAGP | small cell adhesion glycoprotein |
| SRSF4 | serine/arginine-rich splicing factor 4 |
| STBD1 | starch binding domain 1 |
| TCEAL1 | transcription elongation factor A (SII)-like 1 |
| TCERG1 | transcription elongation regulator 1 |
| TGFB1I1 | transforming growth factor beta 1 induced transcript 1 |
| TGFBRAP1 | transforming growth factor, beta receptor associated protein 1 |
| TGIF1 | TGFB-induced factor homeobox 1 |
| TRIB3 | tribbles pseudokinase 3 |
| TRIM13 | tripartite motif containing 13 |
| UNKL | unkempt family zinc finger-like |
| URGCP | upregulator of cell proliferation |
| USP21 | ubiquitin specific peptidase 21 |
| VEGFC | vascular endothelial growth factor C |
| WARS2 | tryptophanyl tRNA synthetase 2, mitochondrial |
| WDR6 | WD repeat domain 6 |
| XBP1 | X-box binding protein 1 |
| ZBED1 | zinc finger, BED-type containing 1 |
| ZBTB38 | zinc finger and BTB domain containing 38 |
| ZC3H4 | zinc finger CCCH-type containing 4 |
| ZNF134 | zinc finger protein 134 |
| ZNF16 | zinc finger protein 16 |
| ZNF165 | zinc finger protein 165 |
| ZNF239 | zinc finger protein 239 |
| ZNF787 | zinc finger protein 787 |
