| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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199 genes differentially expressed following the trichostatin A-6820 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| ACSBG1 | acyl-CoA synthetase bubblegum family member 1 |
| ADD3 | adducin 3 (gamma) |
| ADM | adrenomedullin |
| AHNAK2 | AHNAK nucleoprotein 2 |
| AKAP12 | A kinase (PRKA) anchor protein 12 |
| ALDOC | aldolase C, fructose-bisphosphate |
| ANG | angiogenin, ribonuclease, RNase A family, 5 |
| ARMCX2 | armadillo repeat containing, X-linked 2 |
| BEX4 | brain expressed, X-linked 4 |
| CASC1 | cancer susceptibility candidate 1 |
| CCDC68 | coiled-coil domain containing 68 |
| CCNA1 | cyclin A1 |
| CDKN2D | cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) |
| CEP112 | centrosomal protein 112kDa |
| CLGN | calmegin |
| CORO1A | coronin, actin binding protein, 1A |
| CRISPLD2 | cysteine-rich secretory protein LCCL domain containing 2 |
| CTGF | connective tissue growth factor |
| CXADR | coxsackie virus and adenovirus receptor |
| CXCR4 | chemokine (C-X-C motif) receptor 4 |
| CYLD | cylindromatosis (turban tumor syndrome) |
| CYP46A1 | cytochrome P450, family 46, subfamily A, polypeptide 1 |
| DHRS2 | dehydrogenase/reductase (SDR family) member 2 |
| DNAJB4 | DnaJ (Hsp40) homolog, subfamily B, member 4 |
| DNAJC12 | DnaJ (Hsp40) homolog, subfamily C, member 12 |
| DNAJC6 | DnaJ (Hsp40) homolog, subfamily C, member 6 |
| EFNA3 | ephrin-A3 |
| EFNB3 | ephrin-B3 |
| ELL2 | elongation factor, RNA polymerase II, 2 |
| ELOVL4 | ELOVL fatty acid elongase 4 |
| EPOR | erythropoietin receptor |
| FAM105A | family with sequence similarity 105, member A |
| FAM214B | family with sequence similarity 214, member B |
| FKBP1B | FK506 binding protein 1B, 12.6 kDa |
| FSCN1 | fascin actin-bundling protein 1 |
| FYN | FYN proto-oncogene, Src family tyrosine kinase |
| GEM | GTP binding protein overexpressed in skeletal muscle |
| GLDC | glycine dehydrogenase (decarboxylating) |
| GLRX | glutaredoxin (thioltransferase) |
| GRAMD1C | GRAM domain containing 1C |
| GTF2B | general transcription factor IIB |
| HEY1 | hes-related family bHLH transcription factor with YRPW motif 1 |
| HSD17B11 | hydroxysteroid (17-beta) dehydrogenase 11 |
| HYAL1 | hyaluronoglucosaminidase 1 |
| IL1RAP | interleukin 1 receptor accessory protein |
| ITM2C | integral membrane protein 2C |
| LIMA1 | LIM domain and actin binding 1 |
| MAP1B | microtubule-associated protein 1B |
| MAPK14 | mitogen-activated protein kinase 14 |
| MAPRE2 | microtubule-associated protein, RP/EB family, member 2 |
| MCOLN1 | mucolipin 1 |
| MLF1 | myeloid leukemia factor 1 |
| NAP1L3 | nucleosome assembly protein 1-like 3 |
| NEAT1 | nuclear paraspeckle assembly transcript 1 (non-protein coding) |
| NXN | nucleoredoxin |
| PADI3 | peptidyl arginine deiminase, type III |
| PBXIP1 | pre-B-cell leukemia homeobox interacting protein 1 |
| PDE4DIP | phosphodiesterase 4D interacting protein |
| PIK3CD | phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit delta |
| PLLP | plasmolipin |
| PRPH | peripherin |
| PSMB9 | proteasome (prosome, macropain) subunit, beta type, 9 |
| RAB3B | RAB3B, member RAS oncogene family |
| RAI2 | retinoic acid induced 2 |
| RGCC | regulator of cell cycle |
| RGL1 | ral guanine nucleotide dissociation stimulator-like 1 |
| RGS2 | regulator of G-protein signaling 2 |
| RND1 | Rho family GTPase 1 |
| RPL3L | ribosomal protein L3-like |
| RPS6KA5 | ribosomal protein S6 kinase, 90kDa, polypeptide 5 |
| RTN2 | reticulon 2 |
| RUNDC3B | RUN domain containing 3B |
| SAT1 | spermidine/spermine N1-acetyltransferase 1 |
| SEPP1 | selenoprotein P, plasma, 1 |
| SERPINB5 | serpin peptidase inhibitor, clade B (ovalbumin), member 5 |
| SERPINB9 | serpin peptidase inhibitor, clade B (ovalbumin), member 9 |
| SERPINI1 | serpin peptidase inhibitor, clade I (neuroserpin), member 1 |
| SH3GL3 | SH3-domain GRB2-like 3 |
| SIRT4 | sirtuin 4 |
| SLC17A7 | solute carrier family 17 (vesicular glutamate transporter), member 7 |
| SLC30A3 | solute carrier family 30 (zinc transporter), member 3 |
| SORBS1 | sorbin and SH3 domain containing 1 |
| ST3GAL5 | ST3 beta-galactoside alpha-2,3-sialyltransferase 5 |
| STON1 | stonin 1 |
| SYBU | syntabulin (syntaxin-interacting) |
| SYT11 | synaptotagmin XI |
| TBXA2R | thromboxane A2 receptor |
| TIMP3 | TIMP metallopeptidase inhibitor 3 |
| TRIM36 | tripartite motif containing 36 |
| TUFT1 | tuftelin 1 |
| TXNIP | thioredoxin interacting protein |
| ULBP2 | UL16 binding protein 2 |
| WDR19 | WD repeat domain 19 |
| WIPI1 | WD repeat domain, phosphoinositide interacting 1 |
| ZBTB18 | zinc finger and BTB domain containing 18 |
| ZCCHC24 | zinc finger, CCHC domain containing 24 |
| ZDHHC11 | zinc finger, DHHC-type containing 11 |
| ZNF10 | zinc finger protein 10 |
| ZNF204P | zinc finger protein 204, pseudogene |
| Symbol | Name |
|---|---|
| ACKR3 | atypical chemokine receptor 3 |
| ADGRA3 | adhesion G protein-coupled receptor A3 |
| ADNP | activity-dependent neuroprotector homeobox |
| ALG12 | ALG12, alpha-1,6-mannosyltransferase |
| ANKRD40 | ankyrin repeat domain 40 |
| AP5S1 | adaptor-related protein complex 5, sigma 1 subunit |
| ARHGEF16 | Rho guanine nucleotide exchange factor (GEF) 16 |
| ARHGEF5 | Rho guanine nucleotide exchange factor (GEF) 5 |
| BANP | BTG3 associated nuclear protein |
| BRINP3 | bone morphogenetic protein/retinoic acid inducible neural-specific 3 |
| C9ORF91 | chromosome 9 open reading frame 91 |
| CAPN15 | calpain 15 |
| CASD1 | CAS1 domain containing 1 |
| CBFA2T3 | core-binding factor, runt domain, alpha subunit 2; translocated to, 3 |
| CCND1 | cyclin D1 |
| CDT1 | chromatin licensing and DNA replication factor 1 |
| COA7 | cytochrome c oxidase assembly factor 7 (putative) |
| COIL | coilin |
| CTCF | CCCTC-binding factor (zinc finger protein) |
| CYP26A1 | cytochrome P450, family 26, subfamily A, polypeptide 1 |
| DEAF1 | DEAF1 transcription factor |
| DKK1 | dickkopf WNT signaling pathway inhibitor 1 |
| EGR3 | early growth response 3 |
| EVPL | envoplakin |
| EXOSC10 | exosome component 10 |
| FAM57A | family with sequence similarity 57, member A |
| FJX1 | four jointed box 1 (Drosophila) |
| FOXC1 | forkhead box C1 |
| GABPB1 | GA binding protein transcription factor, beta subunit 1 |
| GATA3 | GATA binding protein 3 |
| GPRC5C | G protein-coupled receptor, class C, group 5, member C |
| GRWD1 | glutamate-rich WD repeat containing 1 |
| GTF2IRD1 | GTF2I repeat domain containing 1 |
| HOXC11 | homeobox C11 |
| IL15RA | interleukin 15 receptor, alpha |
| INHBB | inhibin, beta B |
| IRS1 | insulin receptor substrate 1 |
| IRX5 | iroquois homeobox 5 |
| KAT2A | K(lysine) acetyltransferase 2A |
| KAT6B | K(lysine) acetyltransferase 6B |
| KCNN4 | potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 4 |
| KEAP1 | kelch-like ECH-associated protein 1 |
| KIAA0125 | KIAA0125 |
| LMNB1 | lamin B1 |
| LPAR2 | lysophosphatidic acid receptor 2 |
| LY6G5C | lymphocyte antigen 6 complex, locus G5C |
| MCM9 | minichromosome maintenance complex component 9 |
| MEPCE | methylphosphate capping enzyme |
| MICALL1 | MICAL-like 1 |
| MSL1 | male-specific lethal 1 homolog (Drosophila) |
| MYC | v-myc avian myelocytomatosis viral oncogene homolog |
| MYD88 | myeloid differentiation primary response 88 |
| NACC2 | NACC family member 2, BEN and BTB (POZ) domain containing |
| NFKB1 | nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 |
| NRIP1 | nuclear receptor interacting protein 1 |
| P2RY6 | pyrimidinergic receptor P2Y, G-protein coupled, 6 |
| PCNT | pericentrin |
| PHLDA3 | pleckstrin homology-like domain, family A, member 3 |
| PLK1 | polo-like kinase 1 |
| POGK | pogo transposable element with KRAB domain |
| PPRC1 | peroxisome proliferator-activated receptor gamma, coactivator-related 1 |
| PRNP | prion protein |
| PTPN9 | protein tyrosine phosphatase, non-receptor type 9 |
| RASGRP1 | RAS guanyl releasing protein 1 (calcium and DAG-regulated) |
| SEMA4C | sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C |
| SENP6 | SUMO1/sentrin specific peptidase 6 |
| SETD1B | SET domain containing 1B |
| SFMBT1 | Scm-like with four mbt domains 1 |
| SLC25A38 | solute carrier family 25, member 38 |
| SLC35F2 | solute carrier family 35, member F2 |
| SMEK2 | SMEK homolog 2, suppressor of mek1 (Dictyostelium) |
| SMYD5 | SMYD family member 5 |
| SNHG20 | small nucleolar RNA host gene 20 |
| SREK1 | splicing regulatory glutamine/lysine-rich protein 1 |
| SRSF4 | serine/arginine-rich splicing factor 4 |
| STBD1 | starch binding domain 1 |
| STC2 | stanniocalcin 2 |
| TBL1XR1 | transducin (beta)-like 1 X-linked receptor 1 |
| TGFBRAP1 | transforming growth factor, beta receptor associated protein 1 |
| TMEM223 | transmembrane protein 223 |
| TMEM30B | transmembrane protein 30B |
| TNS3 | tensin 3 |
| TOE1 | target of EGR1, member 1 (nuclear) |
| TPTE | transmembrane phosphatase with tensin homology |
| TRIB3 | tribbles pseudokinase 3 |
| TRIM16 | tripartite motif containing 16 |
| TRIM8 | tripartite motif containing 8 |
| TSKU | tsukushi, small leucine rich proteoglycan |
| UBXN8 | UBX domain protein 8 |
| VRK2 | vaccinia related kinase 2 |
| XBP1 | X-box binding protein 1 |
| ZBED1 | zinc finger, BED-type containing 1 |
| ZBED5 | zinc finger, BED-type containing 5 |
| ZIC1 | Zic family member 1 |
| ZNF282 | zinc finger protein 282 |
| ZNF33B | zinc finger protein 33B |
| ZNF408 | zinc finger protein 408 |
| ZNF692 | zinc finger protein 692 |
| ZNF787 | zinc finger protein 787 |
| ZNHIT2 | zinc finger, HIT-type containing 2 |
