| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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199 genes differentially expressed following the trichostatin A-6874 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| ABAT | 4-aminobutyrate aminotransferase |
| ACSBG1 | acyl-CoA synthetase bubblegum family member 1 |
| AGTR1 | angiotensin II receptor, type 1 |
| ANGPTL4 | angiopoietin-like 4 |
| AQP3 | aquaporin 3 (Gill blood group) |
| ARNTL | aryl hydrocarbon receptor nuclear translocator-like |
| ASMTL | acetylserotonin O-methyltransferase-like |
| ATP11A | ATPase, class VI, type 11A |
| AVPI1 | arginine vasopressin-induced 1 |
| B3GNT2 | UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 |
| BAIAP2 | BAI1-associated protein 2 |
| BAMBI | BMP and activin membrane-bound inhibitor |
| C1QL1 | complement component 1, q subcomponent-like 1 |
| C22ORF29 | chromosome 22 open reading frame 29 |
| CA5B | carbonic anhydrase VB, mitochondrial |
| CDKN1A | cyclin-dependent kinase inhibitor 1A (p21, Cip1) |
| CEP112 | centrosomal protein 112kDa |
| CEP68 | centrosomal protein 68kDa |
| CFAP69 | cilia and flagella associated protein 69 |
| CORO1A | coronin, actin binding protein, 1A |
| CRISPLD2 | cysteine-rich secretory protein LCCL domain containing 2 |
| CTGF | connective tissue growth factor |
| CTH | cystathionine gamma-lyase |
| CYR61 | cysteine-rich, angiogenic inducer, 61 |
| DALRD3 | DALR anticodon binding domain containing 3 |
| DBP | D site of albumin promoter (albumin D-box) binding protein |
| DENND3 | DENN/MADD domain containing 3 |
| DNAJB1 | DnaJ (Hsp40) homolog, subfamily B, member 1 |
| DPF3 | D4, zinc and double PHD fingers, family 3 |
| DUSP1 | dual specificity phosphatase 1 |
| DUSP10 | dual specificity phosphatase 10 |
| ENTPD3 | ectonucleoside triphosphate diphosphohydrolase 3 |
| EPHB3 | EPH receptor B3 |
| EPPK1 | epiplakin 1 |
| F3 | coagulation factor III (thromboplastin, tissue factor) |
| FABP4 | fatty acid binding protein 4, adipocyte |
| GADD45B | growth arrest and DNA-damage-inducible, beta |
| GFOD2 | glucose-fructose oxidoreductase domain containing 2 |
| GK | glycerol kinase |
| GUCY1B3 | guanylate cyclase 1, soluble, beta 3 |
| HOXA1 | homeobox A1 |
| HSPA2 | heat shock 70kDa protein 2 |
| IL11 | interleukin 11 |
| IL1RAP | interleukin 1 receptor accessory protein |
| INSIG1 | insulin induced gene 1 |
| IRF6 | interferon regulatory factor 6 |
| ISYNA1 | inositol-3-phosphate synthase 1 |
| KIF5C | kinesin family member 5C |
| MAP2 | microtubule-associated protein 2 |
| MAPT | microtubule-associated protein tau |
| MBD1 | methyl-CpG binding domain protein 1 |
| MLF1 | myeloid leukemia factor 1 |
| MMP10 | matrix metallopeptidase 10 |
| MSX2 | msh homeobox 2 |
| NEAT1 | nuclear paraspeckle assembly transcript 1 (non-protein coding) |
| NFKBIB | nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta |
| OASL | 2'-5'-oligoadenylate synthetase-like |
| PCDH9 | protocadherin 9 |
| PDE4DIP | phosphodiesterase 4D interacting protein |
| PDLIM5 | PDZ and LIM domain 5 |
| PEX16 | peroxisomal biogenesis factor 16 |
| PLA2G15 | phospholipase A2, group XV |
| PLCG2 | phospholipase C, gamma 2 (phosphatidylinositol-specific) |
| PLLP | plasmolipin |
| PPFIBP1 | PTPRF interacting protein, binding protein 1 (liprin beta 1) |
| PRDM2 | PR domain containing 2, with ZNF domain |
| PSMB9 | proteasome (prosome, macropain) subunit, beta type, 9 |
| RAB11FIP1 | RAB11 family interacting protein 1 (class I) |
| RAB8B | RAB8B, member RAS oncogene family |
| RAI2 | retinoic acid induced 2 |
| RGL1 | ral guanine nucleotide dissociation stimulator-like 1 |
| RND1 | Rho family GTPase 1 |
| ROM1 | retinal outer segment membrane protein 1 |
| SERPINE1 | serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 |
| SERPINI1 | serpin peptidase inhibitor, clade I (neuroserpin), member 1 |
| SKI | SKI proto-oncogene |
| SLC17A7 | solute carrier family 17 (vesicular glutamate transporter), member 7 |
| SLC23A2 | solute carrier family 23 (ascorbic acid transporter), member 2 |
| SLC2A8 | solute carrier family 2 (facilitated glucose transporter), member 8 |
| SLC30A1 | solute carrier family 30 (zinc transporter), member 1 |
| SLC9A3R1 | solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 1 |
| SPOCK3 | sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 |
| SPTAN1 | spectrin, alpha, non-erythrocytic 1 |
| SQSTM1 | sequestosome 1 |
| STC1 | stanniocalcin 1 |
| STK17B | serine/threonine kinase 17b |
| SYT1 | synaptotagmin I |
| SYT11 | synaptotagmin XI |
| SYTL2 | synaptotagmin-like 2 |
| TJP3 | tight junction protein 3 |
| TNFRSF10B | tumor necrosis factor receptor superfamily, member 10b |
| TNFSF9 | tumor necrosis factor (ligand) superfamily, member 9 |
| TUBB2B | tubulin, beta 2B class IIb |
| TUFT1 | tuftelin 1 |
| TXNIP | thioredoxin interacting protein |
| UBE2H | ubiquitin-conjugating enzyme E2H |
| URB1 | URB1 ribosome biogenesis 1 homolog (S. cerevisiae) |
| VAMP1 | vesicle-associated membrane protein 1 (synaptobrevin 1) |
| ZNF277 | zinc finger protein 277 |
| Symbol | Name |
|---|---|
| ACTR3B | ARP3 actin-related protein 3 homolog B (yeast) |
| ADNP | activity-dependent neuroprotector homeobox |
| AFAP1 | actin filament associated protein 1 |
| ARHGEF5 | Rho guanine nucleotide exchange factor (GEF) 5 |
| ARSJ | arylsulfatase family, member J |
| BAG2 | BCL2-associated athanogene 2 |
| BCAR3 | breast cancer anti-estrogen resistance 3 |
| BHLHE41 | basic helix-loop-helix family, member e41 |
| C10ORF88 | chromosome 10 open reading frame 88 |
| C1ORF216 | chromosome 1 open reading frame 216 |
| CASD1 | CAS1 domain containing 1 |
| CBR3 | carbonyl reductase 3 |
| CDT1 | chromatin licensing and DNA replication factor 1 |
| CHKB | choline kinase beta |
| CTCF | CCCTC-binding factor (zinc finger protein) |
| CUL1 | cullin 1 |
| CUTC | cutC copper transporter |
| DEPDC1 | DEP domain containing 1 |
| DRAM1 | DNA-damage regulated autophagy modulator 1 |
| E2F8 | E2F transcription factor 8 |
| EOGT | EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase |
| ERAP2 | endoplasmic reticulum aminopeptidase 2 |
| FADD | Fas (TNFRSF6)-associated via death domain |
| FAM114A2 | family with sequence similarity 114, member A2 |
| FAM169A | family with sequence similarity 169, member A |
| FAM57A | family with sequence similarity 57, member A |
| FJX1 | four jointed box 1 (Drosophila) |
| FOSL1 | FOS-like antigen 1 |
| FOXA1 | forkhead box A1 |
| GPR87 | G protein-coupled receptor 87 |
| GUCY1A3 | guanylate cyclase 1, soluble, alpha 3 |
| HAS2 | hyaluronan synthase 2 |
| HEATR3 | HEAT repeat containing 3 |
| HGSNAT | heparan-alpha-glucosaminide N-acetyltransferase |
| HMG20A | high mobility group 20A |
| HMGA2 | high mobility group AT-hook 2 |
| IL7R | interleukin 7 receptor |
| INHBB | inhibin, beta B |
| KBTBD4 | kelch repeat and BTB (POZ) domain containing 4 |
| KEAP1 | kelch-like ECH-associated protein 1 |
| LIF | leukemia inhibitory factor |
| LMNB1 | lamin B1 |
| LPAR1 | lysophosphatidic acid receptor 1 |
| LRIF1 | ligand dependent nuclear receptor interacting factor 1 |
| LUC7L2 | LUC7-like 2 (S. cerevisiae) |
| MANSC1 | MANSC domain containing 1 |
| MEPCE | methylphosphate capping enzyme |
| MMACHC | methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria |
| MSL1 | male-specific lethal 1 homolog (Drosophila) |
| NDC80 | NDC80 kinetochore complex component |
| NMI | N-myc (and STAT) interactor |
| NRIP1 | nuclear receptor interacting protein 1 |
| NTSR1 | neurotensin receptor 1 (high affinity) |
| NUDT13 | nudix (nucleoside diphosphate linked moiety X)-type motif 13 |
| NUP62 | nucleoporin 62kDa |
| OPA3 | optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia) |
| PARP12 | poly (ADP-ribose) polymerase family, member 12 |
| PLAU | plasminogen activator, urokinase |
| POLL | polymerase (DNA directed), lambda |
| PPAP2B | phosphatidic acid phosphatase type 2B |
| PPRC1 | peroxisome proliferator-activated receptor gamma, coactivator-related 1 |
| PTPN9 | protein tyrosine phosphatase, non-receptor type 9 |
| RBM4B | RNA binding motif protein 4B |
| RIN2 | Ras and Rab interactor 2 |
| RPRD2 | regulation of nuclear pre-mRNA domain containing 2 |
| SERPINH1 | serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1) |
| SETD1B | SET domain containing 1B |
| SIDT1 | SID1 transmembrane family, member 1 |
| SIM2 | single-minded family bHLH transcription factor 2 |
| SKA1 | spindle and kinetochore associated complex subunit 1 |
| SLC35C1 | solute carrier family 35 (GDP-fucose transporter), member C1 |
| SMAGP | small cell adhesion glycoprotein |
| SMPDL3A | sphingomyelin phosphodiesterase, acid-like 3A |
| SPHK1 | sphingosine kinase 1 |
| SRSF4 | serine/arginine-rich splicing factor 4 |
| STBD1 | starch binding domain 1 |
| SYNPO | synaptopodin |
| TACO1 | translational activator of mitochondrially encoded cytochrome c oxidase I |
| TBL1XR1 | transducin (beta)-like 1 X-linked receptor 1 |
| TOE1 | target of EGR1, member 1 (nuclear) |
| TOR3A | torsin family 3, member A |
| TRAF5 | TNF receptor-associated factor 5 |
| TRIB3 | tribbles pseudokinase 3 |
| TRIM13 | tripartite motif containing 13 |
| TRIM5 | tripartite motif containing 5 |
| TRIM8 | tripartite motif containing 8 |
| TRMT2A | tRNA methyltransferase 2 homolog A (S. cerevisiae) |
| USP21 | ubiquitin specific peptidase 21 |
| VEGFC | vascular endothelial growth factor C |
| VPS54 | vacuolar protein sorting 54 homolog (S. cerevisiae) |
| VWA9 | von Willebrand factor A domain containing 9 |
| WDR82 | WD repeat domain 82 |
| WNT7A | wingless-type MMTV integration site family, member 7A |
| ZBED1 | zinc finger, BED-type containing 1 |
| ZC3H4 | zinc finger CCCH-type containing 4 |
| ZNF112 | zinc finger protein 112 |
| ZNF32 | zinc finger protein 32 |
| ZNF532 | zinc finger protein 532 |
| ZNF573 | zinc finger protein 573 |
| ZZZ3 | zinc finger, ZZ-type containing 3 |
