| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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199 genes differentially expressed following the trichostatin A-6891 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| ACSBG1 | acyl-CoA synthetase bubblegum family member 1 |
| AHNAK2 | AHNAK nucleoprotein 2 |
| AKAP12 | A kinase (PRKA) anchor protein 12 |
| ARMCX2 | armadillo repeat containing, X-linked 2 |
| BAIAP2 | BAI1-associated protein 2 |
| BAIAP3 | BAI1-associated protein 3 |
| CALCOCO1 | calcium binding and coiled-coil domain 1 |
| CCDC28A | coiled-coil domain containing 28A |
| CDKN1C | cyclin-dependent kinase inhibitor 1C (p57, Kip2) |
| CDKN2D | cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) |
| CHST12 | carbohydrate (chondroitin 4) sulfotransferase 12 |
| CLGN | calmegin |
| CRISPLD2 | cysteine-rich secretory protein LCCL domain containing 2 |
| CXADR | coxsackie virus and adenovirus receptor |
| CYLD | cylindromatosis (turban tumor syndrome) |
| CYP46A1 | cytochrome P450, family 46, subfamily A, polypeptide 1 |
| CYP4F2 | cytochrome P450, family 4, subfamily F, polypeptide 2 |
| DFNB31 | deafness, autosomal recessive 31 |
| DHRS2 | dehydrogenase/reductase (SDR family) member 2 |
| DNAJC12 | DnaJ (Hsp40) homolog, subfamily C, member 12 |
| DNAJC6 | DnaJ (Hsp40) homolog, subfamily C, member 6 |
| DPYSL4 | dihydropyrimidinase-like 4 |
| DYRK3 | dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3 |
| EFNA3 | ephrin-A3 |
| EFNB3 | ephrin-B3 |
| ELOVL4 | ELOVL fatty acid elongase 4 |
| EPOR | erythropoietin receptor |
| FAM214B | family with sequence similarity 214, member B |
| FKBP1B | FK506 binding protein 1B, 12.6 kDa |
| FSCN1 | fascin actin-bundling protein 1 |
| FYN | FYN proto-oncogene, Src family tyrosine kinase |
| GEM | GTP binding protein overexpressed in skeletal muscle |
| GFPT2 | glutamine-fructose-6-phosphate transaminase 2 |
| GLCE | glucuronic acid epimerase |
| GLDC | glycine dehydrogenase (decarboxylating) |
| GLRX | glutaredoxin (thioltransferase) |
| GRAMD1C | GRAM domain containing 1C |
| GRK5 | G protein-coupled receptor kinase 5 |
| GSDMB | gasdermin B |
| GTF2B | general transcription factor IIB |
| HSD17B11 | hydroxysteroid (17-beta) dehydrogenase 11 |
| IFI6 | interferon, alpha-inducible protein 6 |
| KIF13B | kinesin family member 13B |
| KIF21B | kinesin family member 21B |
| LIMA1 | LIM domain and actin binding 1 |
| LTB4R | leukotriene B4 receptor |
| LYST | lysosomal trafficking regulator |
| MAP1B | microtubule-associated protein 1B |
| MAPRE2 | microtubule-associated protein, RP/EB family, member 2 |
| MARK4 | MAP/microtubule affinity-regulating kinase 4 |
| MAST3 | microtubule associated serine/threonine kinase 3 |
| MLF1 | myeloid leukemia factor 1 |
| NEDD9 | neural precursor cell expressed, developmentally down-regulated 9 |
| NKX3-1 | NK3 homeobox 1 |
| NME5 | NME/NM23 family member 5 |
| NPC1 | Niemann-Pick disease, type C1 |
| NXN | nucleoredoxin |
| OASL | 2'-5'-oligoadenylate synthetase-like |
| PAIP2B | poly(A) binding protein interacting protein 2B |
| PBXIP1 | pre-B-cell leukemia homeobox interacting protein 1 |
| PDE4A | phosphodiesterase 4A, cAMP-specific |
| PER1 | period circadian clock 1 |
| PI4K2A | phosphatidylinositol 4-kinase type 2 alpha |
| PIK3CD | phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit delta |
| PMEL | premelanosome protein |
| PRPH | peripherin |
| RAI2 | retinoic acid induced 2 |
| RGL1 | ral guanine nucleotide dissociation stimulator-like 1 |
| RGS2 | regulator of G-protein signaling 2 |
| RIPK4 | receptor-interacting serine-threonine kinase 4 |
| RPL3L | ribosomal protein L3-like |
| RPS6KA5 | ribosomal protein S6 kinase, 90kDa, polypeptide 5 |
| RUNDC3B | RUN domain containing 3B |
| SAT1 | spermidine/spermine N1-acetyltransferase 1 |
| SEPP1 | selenoprotein P, plasma, 1 |
| SERPINB5 | serpin peptidase inhibitor, clade B (ovalbumin), member 5 |
| SERPINB9 | serpin peptidase inhibitor, clade B (ovalbumin), member 9 |
| SERPINI1 | serpin peptidase inhibitor, clade I (neuroserpin), member 1 |
| SH3GL3 | SH3-domain GRB2-like 3 |
| SIRT4 | sirtuin 4 |
| SLC17A7 | solute carrier family 17 (vesicular glutamate transporter), member 7 |
| STK17A | serine/threonine kinase 17a |
| STON1 | stonin 1 |
| STX2 | syntaxin 2 |
| SYT11 | synaptotagmin XI |
| TBXA2R | thromboxane A2 receptor |
| TNFSF9 | tumor necrosis factor (ligand) superfamily, member 9 |
| TTBK2 | tau tubulin kinase 2 |
| TUFT1 | tuftelin 1 |
| TXNIP | thioredoxin interacting protein |
| ULBP2 | UL16 binding protein 2 |
| WDR19 | WD repeat domain 19 |
| WDR47 | WD repeat domain 47 |
| WIPI1 | WD repeat domain, phosphoinositide interacting 1 |
| ZCCHC24 | zinc finger, CCHC domain containing 24 |
| ZDHHC11 | zinc finger, DHHC-type containing 11 |
| ZNF10 | zinc finger protein 10 |
| ZNF204P | zinc finger protein 204, pseudogene |
| ZNF778 | zinc finger protein 778 |
| Symbol | Name |
|---|---|
| ACKR3 | atypical chemokine receptor 3 |
| ADGRA3 | adhesion G protein-coupled receptor A3 |
| ADNP | activity-dependent neuroprotector homeobox |
| ALKBH4 | alkB, alkylation repair homolog 4 (E. coli) |
| AMIGO2 | adhesion molecule with Ig-like domain 2 |
| ARAP2 | ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 |
| ARHGEF16 | Rho guanine nucleotide exchange factor (GEF) 16 |
| ARTN | artemin |
| ATAD2B | ATPase family, AAA domain containing 2B |
| BANP | BTG3 associated nuclear protein |
| BATF | basic leucine zipper transcription factor, ATF-like |
| BCAR3 | breast cancer anti-estrogen resistance 3 |
| CBFA2T3 | core-binding factor, runt domain, alpha subunit 2; translocated to, 3 |
| CBR3 | carbonyl reductase 3 |
| CCDC170 | coiled-coil domain containing 170 |
| CCDC94 | coiled-coil domain containing 94 |
| CCND1 | cyclin D1 |
| CDC42EP1 | CDC42 effector protein (Rho GTPase binding) 1 |
| CHKB | choline kinase beta |
| COIL | coilin |
| CTCF | CCCTC-binding factor (zinc finger protein) |
| CTPS1 | CTP synthase 1 |
| CUEDC1 | CUE domain containing 1 |
| DHX35 | DEAH (Asp-Glu-Ala-His) box polypeptide 35 |
| DKK1 | dickkopf WNT signaling pathway inhibitor 1 |
| EFNA1 | ephrin-A1 |
| EGR3 | early growth response 3 |
| ESRP2 | epithelial splicing regulatory protein 2 |
| FAM155B | family with sequence similarity 155, member B |
| FAM57A | family with sequence similarity 57, member A |
| FJX1 | four jointed box 1 (Drosophila) |
| FOXA1 | forkhead box A1 |
| FOXC1 | forkhead box C1 |
| FOXJ2 | forkhead box J2 |
| GABPB1 | GA binding protein transcription factor, beta subunit 1 |
| GATA3 | GATA binding protein 3 |
| GATA4 | GATA binding protein 4 |
| GTF2IRD1 | GTF2I repeat domain containing 1 |
| HGSNAT | heparan-alpha-glucosaminide N-acetyltransferase |
| HOXC11 | homeobox C11 |
| IL15RA | interleukin 15 receptor, alpha |
| INHBB | inhibin, beta B |
| IRS1 | insulin receptor substrate 1 |
| IRX5 | iroquois homeobox 5 |
| KCTD15 | potassium channel tetramerization domain containing 15 |
| KEAP1 | kelch-like ECH-associated protein 1 |
| KIAA0125 | KIAA0125 |
| LMNB1 | lamin B1 |
| LRFN4 | leucine rich repeat and fibronectin type III domain containing 4 |
| LY6G5C | lymphocyte antigen 6 complex, locus G5C |
| MCM9 | minichromosome maintenance complex component 9 |
| MEPCE | methylphosphate capping enzyme |
| METTL8 | methyltransferase like 8 |
| MRM1 | mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae) |
| MSL1 | male-specific lethal 1 homolog (Drosophila) |
| MYC | v-myc avian myelocytomatosis viral oncogene homolog |
| MYD88 | myeloid differentiation primary response 88 |
| NPY1R | neuropeptide Y receptor Y1 |
| NR2F2 | nuclear receptor subfamily 2, group F, member 2 |
| NRIP1 | nuclear receptor interacting protein 1 |
| NSD1 | nuclear receptor binding SET domain protein 1 |
| NUAK1 | NUAK family, SNF1-like kinase, 1 |
| OPA3 | optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia) |
| PHLDA3 | pleckstrin homology-like domain, family A, member 3 |
| PLK1 | polo-like kinase 1 |
| POGK | pogo transposable element with KRAB domain |
| PPAN | peter pan homolog (Drosophila) |
| PRR15L | proline rich 15-like |
| RASGRP1 | RAS guanyl releasing protein 1 (calcium and DAG-regulated) |
| RBM23 | RNA binding motif protein 23 |
| RPRD2 | regulation of nuclear pre-mRNA domain containing 2 |
| SEMA4C | sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C |
| SETD1B | SET domain containing 1B |
| SFMBT1 | Scm-like with four mbt domains 1 |
| SLC35F2 | solute carrier family 35, member F2 |
| SLC6A14 | solute carrier family 6 (amino acid transporter), member 14 |
| SMAD7 | SMAD family member 7 |
| SMG9 | SMG9 nonsense mediated mRNA decay factor |
| SREK1 | splicing regulatory glutamine/lysine-rich protein 1 |
| SRSF4 | serine/arginine-rich splicing factor 4 |
| STC2 | stanniocalcin 2 |
| SUV39H2 | suppressor of variegation 3-9 homolog 2 (Drosophila) |
| TGFBRAP1 | transforming growth factor, beta receptor associated protein 1 |
| TGIF1 | TGFB-induced factor homeobox 1 |
| TNS2 | tensin 2 |
| TOE1 | target of EGR1, member 1 (nuclear) |
| TRAF5 | TNF receptor-associated factor 5 |
| TRIB3 | tribbles pseudokinase 3 |
| TSKU | tsukushi, small leucine rich proteoglycan |
| VRK2 | vaccinia related kinase 2 |
| VWA9 | von Willebrand factor A domain containing 9 |
| XBP1 | X-box binding protein 1 |
| ZBED1 | zinc finger, BED-type containing 1 |
| ZC3H4 | zinc finger CCCH-type containing 4 |
| ZHX2 | zinc fingers and homeoboxes 2 |
| ZIC1 | Zic family member 1 |
| ZMIZ1 | zinc finger, MIZ-type containing 1 |
| ZNF573 | zinc finger protein 573 |
| ZNF692 | zinc finger protein 692 |
| ZNHIT2 | zinc finger, HIT-type containing 2 |
