| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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200 genes differentially expressed following the trichostatin A-6932 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| ACSBG1 | acyl-CoA synthetase bubblegum family member 1 |
| ACSF2 | acyl-CoA synthetase family member 2 |
| AGFG2 | ArfGAP with FG repeats 2 |
| AHNAK2 | AHNAK nucleoprotein 2 |
| AKAP12 | A kinase (PRKA) anchor protein 12 |
| ALDOC | aldolase C, fructose-bisphosphate |
| ARMCX2 | armadillo repeat containing, X-linked 2 |
| BMP7 | bone morphogenetic protein 7 |
| CCDC28A | coiled-coil domain containing 28A |
| CDKN2D | cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) |
| CHST12 | carbohydrate (chondroitin 4) sulfotransferase 12 |
| CLGN | calmegin |
| CORO1A | coronin, actin binding protein, 1A |
| CRISPLD2 | cysteine-rich secretory protein LCCL domain containing 2 |
| CSRP2 | cysteine and glycine-rich protein 2 |
| CXADR | coxsackie virus and adenovirus receptor |
| CYB5R1 | cytochrome b5 reductase 1 |
| CYLD | cylindromatosis (turban tumor syndrome) |
| CYP46A1 | cytochrome P450, family 46, subfamily A, polypeptide 1 |
| DHRS2 | dehydrogenase/reductase (SDR family) member 2 |
| DLX2 | distal-less homeobox 2 |
| DNAJB4 | DnaJ (Hsp40) homolog, subfamily B, member 4 |
| DNAJC12 | DnaJ (Hsp40) homolog, subfamily C, member 12 |
| DNAJC6 | DnaJ (Hsp40) homolog, subfamily C, member 6 |
| DPYSL4 | dihydropyrimidinase-like 4 |
| DUSP10 | dual specificity phosphatase 10 |
| DYRK3 | dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3 |
| EFNA3 | ephrin-A3 |
| EFNB3 | ephrin-B3 |
| ELOVL4 | ELOVL fatty acid elongase 4 |
| EPOR | erythropoietin receptor |
| FAM105A | family with sequence similarity 105, member A |
| FSCN1 | fascin actin-bundling protein 1 |
| FYN | FYN proto-oncogene, Src family tyrosine kinase |
| GEM | GTP binding protein overexpressed in skeletal muscle |
| GFPT2 | glutamine-fructose-6-phosphate transaminase 2 |
| GLRX | glutaredoxin (thioltransferase) |
| GLS | glutaminase |
| GRK5 | G protein-coupled receptor kinase 5 |
| GTF2B | general transcription factor IIB |
| HEY1 | hes-related family bHLH transcription factor with YRPW motif 1 |
| HMHA1 | histocompatibility (minor) HA-1 |
| IFI6 | interferon, alpha-inducible protein 6 |
| IGFBP3 | insulin-like growth factor binding protein 3 |
| KIAA0355 | KIAA0355 |
| KIF13B | kinesin family member 13B |
| KIF21B | kinesin family member 21B |
| KIF5C | kinesin family member 5C |
| LIMA1 | LIM domain and actin binding 1 |
| LYST | lysosomal trafficking regulator |
| MAPRE2 | microtubule-associated protein, RP/EB family, member 2 |
| MAX | MYC associated factor X |
| MLF1 | myeloid leukemia factor 1 |
| MMD | monocyte to macrophage differentiation-associated |
| MXI1 | MAX interactor 1, dimerization protein |
| MXRA7 | matrix-remodelling associated 7 |
| NAV2 | neuron navigator 2 |
| NEAT1 | nuclear paraspeckle assembly transcript 1 (non-protein coding) |
| NEDD9 | neural precursor cell expressed, developmentally down-regulated 9 |
| NES | nestin |
| NME7 | NME/NM23 family member 7 |
| NPC1 | Niemann-Pick disease, type C1 |
| NXN | nucleoredoxin |
| NXPE3 | neurexophilin and PC-esterase domain family, member 3 |
| PDE4A | phosphodiesterase 4A, cAMP-specific |
| PDE4DIP | phosphodiesterase 4D interacting protein |
| PIK3CD | phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit delta |
| PKIA | protein kinase (cAMP-dependent, catalytic) inhibitor alpha |
| PRPH | peripherin |
| PTRF | polymerase I and transcript release factor |
| RAB11FIP1 | RAB11 family interacting protein 1 (class I) |
| RAB40B | RAB40B, member RAS oncogene family |
| RGL1 | ral guanine nucleotide dissociation stimulator-like 1 |
| RGS2 | regulator of G-protein signaling 2 |
| RIMS3 | regulating synaptic membrane exocytosis 3 |
| RTN2 | reticulon 2 |
| RUNDC3B | RUN domain containing 3B |
| SAT1 | spermidine/spermine N1-acetyltransferase 1 |
| SEPP1 | selenoprotein P, plasma, 1 |
| SERPINB9 | serpin peptidase inhibitor, clade B (ovalbumin), member 9 |
| SERPINI1 | serpin peptidase inhibitor, clade I (neuroserpin), member 1 |
| SH3GL3 | SH3-domain GRB2-like 3 |
| SLC17A7 | solute carrier family 17 (vesicular glutamate transporter), member 7 |
| ST3GAL5 | ST3 beta-galactoside alpha-2,3-sialyltransferase 5 |
| STON1 | stonin 1 |
| STXBP1 | syntaxin binding protein 1 |
| TMSB15A | thymosin beta 15a |
| TRAFD1 | TRAF-type zinc finger domain containing 1 |
| TUBB2A | tubulin, beta 2A class IIa |
| TUFT1 | tuftelin 1 |
| TXNIP | thioredoxin interacting protein |
| ULBP2 | UL16 binding protein 2 |
| VAMP1 | vesicle-associated membrane protein 1 (synaptobrevin 1) |
| WDR47 | WD repeat domain 47 |
| WIPI1 | WD repeat domain, phosphoinositide interacting 1 |
| WSB1 | WD repeat and SOCS box containing 1 |
| ZCCHC24 | zinc finger, CCHC domain containing 24 |
| ZDHHC11 | zinc finger, DHHC-type containing 11 |
| ZNF10 | zinc finger protein 10 |
| ZNF204P | zinc finger protein 204, pseudogene |
| Symbol | Name |
|---|---|
| ACKR3 | atypical chemokine receptor 3 |
| ADNP | activity-dependent neuroprotector homeobox |
| ADRA2C | adrenoceptor alpha 2C |
| AMIGO2 | adhesion molecule with Ig-like domain 2 |
| AP5S1 | adaptor-related protein complex 5, sigma 1 subunit |
| BANP | BTG3 associated nuclear protein |
| BCAR3 | breast cancer anti-estrogen resistance 3 |
| BRINP3 | bone morphogenetic protein/retinoic acid inducible neural-specific 3 |
| C1ORF106 | chromosome 1 open reading frame 106 |
| C9ORF91 | chromosome 9 open reading frame 91 |
| CBFA2T3 | core-binding factor, runt domain, alpha subunit 2; translocated to, 3 |
| CBR3 | carbonyl reductase 3 |
| CCDC94 | coiled-coil domain containing 94 |
| CCND1 | cyclin D1 |
| CDC7 | cell division cycle 7 |
| CDK5RAP2 | CDK5 regulatory subunit associated protein 2 |
| CDKN1B | cyclin-dependent kinase inhibitor 1B (p27, Kip1) |
| COIL | coilin |
| CTCF | CCCTC-binding factor (zinc finger protein) |
| CTDSP1 | CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 |
| CXCL12 | chemokine (C-X-C motif) ligand 12 |
| DKK1 | dickkopf WNT signaling pathway inhibitor 1 |
| DNAJC22 | DnaJ (Hsp40) homolog, subfamily C, member 22 |
| DOLPP1 | dolichyldiphosphatase 1 |
| EFNA1 | ephrin-A1 |
| EGR3 | early growth response 3 |
| EIF2B5 | eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa |
| ERAL1 | Era-like 12S mitochondrial rRNA chaperone 1 |
| ESRP2 | epithelial splicing regulatory protein 2 |
| FAM57A | family with sequence similarity 57, member A |
| FJX1 | four jointed box 1 (Drosophila) |
| FOXA1 | forkhead box A1 |
| FOXD1 | forkhead box D1 |
| FOXJ2 | forkhead box J2 |
| GABPB1 | GA binding protein transcription factor, beta subunit 1 |
| GATA3 | GATA binding protein 3 |
| GMEB2 | glucocorticoid modulatory element binding protein 2 |
| GPRC5C | G protein-coupled receptor, class C, group 5, member C |
| GRWD1 | glutamate-rich WD repeat containing 1 |
| INHBB | inhibin, beta B |
| IRS1 | insulin receptor substrate 1 |
| IRX5 | iroquois homeobox 5 |
| KAT6B | K(lysine) acetyltransferase 6B |
| KBTBD4 | kelch repeat and BTB (POZ) domain containing 4 |
| KEAP1 | kelch-like ECH-associated protein 1 |
| LMNB1 | lamin B1 |
| LTBR | lymphotoxin beta receptor (TNFR superfamily, member 3) |
| MEPCE | methylphosphate capping enzyme |
| MLPH | melanophilin |
| MSL1 | male-specific lethal 1 homolog (Drosophila) |
| MYC | v-myc avian myelocytomatosis viral oncogene homolog |
| MYD88 | myeloid differentiation primary response 88 |
| NCOA6 | nuclear receptor coactivator 6 |
| NFIC | nuclear factor I/C (CCAAT-binding transcription factor) |
| NFKB1 | nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 |
| NPY1R | neuropeptide Y receptor Y1 |
| NR2F2 | nuclear receptor subfamily 2, group F, member 2 |
| NRIP1 | nuclear receptor interacting protein 1 |
| NSD1 | nuclear receptor binding SET domain protein 1 |
| NUAK1 | NUAK family, SNF1-like kinase, 1 |
| PHLDA3 | pleckstrin homology-like domain, family A, member 3 |
| PLK1 | polo-like kinase 1 |
| PMM2 | phosphomannomutase 2 |
| POGK | pogo transposable element with KRAB domain |
| POLR3B | polymerase (RNA) III (DNA directed) polypeptide B |
| PRR15L | proline rich 15-like |
| PRR7 | proline rich 7 (synaptic) |
| RABGGTA | Rab geranylgeranyltransferase, alpha subunit |
| RASGRP1 | RAS guanyl releasing protein 1 (calcium and DAG-regulated) |
| RBM23 | RNA binding motif protein 23 |
| RNF220 | ring finger protein 220 |
| RPRD2 | regulation of nuclear pre-mRNA domain containing 2 |
| RRS1 | RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) |
| SCAF8 | SR-related CTD-associated factor 8 |
| SETD1B | SET domain containing 1B |
| SMAD7 | SMAD family member 7 |
| SREK1 | splicing regulatory glutamine/lysine-rich protein 1 |
| SRSF4 | serine/arginine-rich splicing factor 4 |
| STC2 | stanniocalcin 2 |
| TGFB3 | transforming growth factor, beta 3 |
| TNS3 | tensin 3 |
| TOE1 | target of EGR1, member 1 (nuclear) |
| TRIB1 | tribbles pseudokinase 1 |
| TRIB3 | tribbles pseudokinase 3 |
| TRIM16 | tripartite motif containing 16 |
| TRIM8 | tripartite motif containing 8 |
| TRPS1 | trichorhinophalangeal syndrome I |
| TSEN2 | TSEN2 tRNA splicing endonuclease subunit |
| TSKU | tsukushi, small leucine rich proteoglycan |
| UBTF | upstream binding transcription factor, RNA polymerase I |
| UNC50 | unc-50 homolog (C. elegans) |
| UNKL | unkempt family zinc finger-like |
| VRK2 | vaccinia related kinase 2 |
| XBP1 | X-box binding protein 1 |
| ZBED5 | zinc finger, BED-type containing 5 |
| ZHX2 | zinc fingers and homeoboxes 2 |
| ZIC1 | Zic family member 1 |
| ZMIZ1 | zinc finger, MIZ-type containing 1 |
| ZMYM3 | zinc finger, MYM-type 3 |
| ZNF692 | zinc finger protein 692 |
