| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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198 genes differentially expressed following the trichostatin A-6993 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| ACSBG1 | acyl-CoA synthetase bubblegum family member 1 |
| ACSF2 | acyl-CoA synthetase family member 2 |
| AHNAK2 | AHNAK nucleoprotein 2 |
| AKAP12 | A kinase (PRKA) anchor protein 12 |
| ALDOC | aldolase C, fructose-bisphosphate |
| ARMCX2 | armadillo repeat containing, X-linked 2 |
| BAIAP2 | BAI1-associated protein 2 |
| BAIAP3 | BAI1-associated protein 3 |
| CCDC28A | coiled-coil domain containing 28A |
| CCNA1 | cyclin A1 |
| CDKN2D | cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) |
| CLGN | calmegin |
| CLMN | calmin (calponin-like, transmembrane) |
| CRISPLD2 | cysteine-rich secretory protein LCCL domain containing 2 |
| CSRP2 | cysteine and glycine-rich protein 2 |
| CXADR | coxsackie virus and adenovirus receptor |
| CYLD | cylindromatosis (turban tumor syndrome) |
| CYP46A1 | cytochrome P450, family 46, subfamily A, polypeptide 1 |
| DHRS2 | dehydrogenase/reductase (SDR family) member 2 |
| DNAJC12 | DnaJ (Hsp40) homolog, subfamily C, member 12 |
| DNAJC6 | DnaJ (Hsp40) homolog, subfamily C, member 6 |
| DPYSL4 | dihydropyrimidinase-like 4 |
| EFNA3 | ephrin-A3 |
| EFNB3 | ephrin-B3 |
| EGR1 | early growth response 1 |
| ELOVL4 | ELOVL fatty acid elongase 4 |
| FKBP1B | FK506 binding protein 1B, 12.6 kDa |
| FN1 | fibronectin 1 |
| FSCN1 | fascin actin-bundling protein 1 |
| FYN | FYN proto-oncogene, Src family tyrosine kinase |
| GCHFR | GTP cyclohydrolase I feedback regulator |
| GEM | GTP binding protein overexpressed in skeletal muscle |
| GFPT2 | glutamine-fructose-6-phosphate transaminase 2 |
| GLCE | glucuronic acid epimerase |
| GLRX | glutaredoxin (thioltransferase) |
| GLS | glutaminase |
| GRK5 | G protein-coupled receptor kinase 5 |
| GTF2B | general transcription factor IIB |
| HEY1 | hes-related family bHLH transcription factor with YRPW motif 1 |
| HSPA2 | heat shock 70kDa protein 2 |
| IRF6 | interferon regulatory factor 6 |
| IRF7 | interferon regulatory factor 7 |
| KIAA0513 | KIAA0513 |
| KIF13B | kinesin family member 13B |
| KIF5C | kinesin family member 5C |
| LIMA1 | LIM domain and actin binding 1 |
| MAPRE2 | microtubule-associated protein, RP/EB family, member 2 |
| MAPT | microtubule-associated protein tau |
| MAST3 | microtubule associated serine/threonine kinase 3 |
| MLF1 | myeloid leukemia factor 1 |
| MMD | monocyte to macrophage differentiation-associated |
| NES | nestin |
| NME5 | NME/NM23 family member 5 |
| NPC1 | Niemann-Pick disease, type C1 |
| NXN | nucleoredoxin |
| OASL | 2'-5'-oligoadenylate synthetase-like |
| PADI3 | peptidyl arginine deiminase, type III |
| PAIP2B | poly(A) binding protein interacting protein 2B |
| PARP16 | poly (ADP-ribose) polymerase family, member 16 |
| PCDH9 | protocadherin 9 |
| PDE4DIP | phosphodiesterase 4D interacting protein |
| PIK3CD | phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit delta |
| PMEL | premelanosome protein |
| PPARD | peroxisome proliferator-activated receptor delta |
| PRPH | peripherin |
| PTRF | polymerase I and transcript release factor |
| RAB11FIP1 | RAB11 family interacting protein 1 (class I) |
| RAB40B | RAB40B, member RAS oncogene family |
| RGL1 | ral guanine nucleotide dissociation stimulator-like 1 |
| RGS2 | regulator of G-protein signaling 2 |
| RIPK4 | receptor-interacting serine-threonine kinase 4 |
| RPL3L | ribosomal protein L3-like |
| RPS6KA5 | ribosomal protein S6 kinase, 90kDa, polypeptide 5 |
| RTN2 | reticulon 2 |
| RUNDC3B | RUN domain containing 3B |
| SEPP1 | selenoprotein P, plasma, 1 |
| SERPINB5 | serpin peptidase inhibitor, clade B (ovalbumin), member 5 |
| SERPINB9 | serpin peptidase inhibitor, clade B (ovalbumin), member 9 |
| SERPINI1 | serpin peptidase inhibitor, clade I (neuroserpin), member 1 |
| SH3GL3 | SH3-domain GRB2-like 3 |
| SIRT4 | sirtuin 4 |
| SLC17A7 | solute carrier family 17 (vesicular glutamate transporter), member 7 |
| SLC26A2 | solute carrier family 26 (anion exchanger), member 2 |
| STXBP1 | syntaxin binding protein 1 |
| SYT11 | synaptotagmin XI |
| TMSB15A | thymosin beta 15a |
| TRIM2 | tripartite motif containing 2 |
| TUBB2A | tubulin, beta 2A class IIa |
| TUFT1 | tuftelin 1 |
| TXNIP | thioredoxin interacting protein |
| ULBP2 | UL16 binding protein 2 |
| WDR19 | WD repeat domain 19 |
| WDR47 | WD repeat domain 47 |
| WIPI1 | WD repeat domain, phosphoinositide interacting 1 |
| ZCCHC24 | zinc finger, CCHC domain containing 24 |
| ZDHHC11 | zinc finger, DHHC-type containing 11 |
| ZNF10 | zinc finger protein 10 |
| ZNF204P | zinc finger protein 204, pseudogene |
| Symbol | Name |
|---|---|
| ACKR3 | atypical chemokine receptor 3 |
| ADNP | activity-dependent neuroprotector homeobox |
| AMIGO2 | adhesion molecule with Ig-like domain 2 |
| AP5S1 | adaptor-related protein complex 5, sigma 1 subunit |
| ARHGEF5 | Rho guanine nucleotide exchange factor (GEF) 5 |
| ASPSCR1 | alveolar soft part sarcoma chromosome region, candidate 1 |
| BCAR3 | breast cancer anti-estrogen resistance 3 |
| C9ORF91 | chromosome 9 open reading frame 91 |
| CBFA2T3 | core-binding factor, runt domain, alpha subunit 2; translocated to, 3 |
| CBR3 | carbonyl reductase 3 |
| CCDC94 | coiled-coil domain containing 94 |
| CCND1 | cyclin D1 |
| CDK5RAP2 | CDK5 regulatory subunit associated protein 2 |
| CDKN1B | cyclin-dependent kinase inhibitor 1B (p27, Kip1) |
| COIL | coilin |
| CTCF | CCCTC-binding factor (zinc finger protein) |
| CTDSP1 | CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 |
| CXCL12 | chemokine (C-X-C motif) ligand 12 |
| DKK1 | dickkopf WNT signaling pathway inhibitor 1 |
| DUSP4 | dual specificity phosphatase 4 |
| E2F3 | E2F transcription factor 3 |
| EFNA1 | ephrin-A1 |
| EGR3 | early growth response 3 |
| EOGT | EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase |
| ERBB2IP | erbb2 interacting protein |
| ESRP2 | epithelial splicing regulatory protein 2 |
| FAM57A | family with sequence similarity 57, member A |
| FJX1 | four jointed box 1 (Drosophila) |
| FOXA1 | forkhead box A1 |
| FOXD1 | forkhead box D1 |
| GABPB1 | GA binding protein transcription factor, beta subunit 1 |
| GATA3 | GATA binding protein 3 |
| GTF2I | general transcription factor IIi |
| H2AFY2 | H2A histone family, member Y2 |
| HIRIP3 | HIRA interacting protein 3 |
| HIVEP1 | human immunodeficiency virus type I enhancer binding protein 1 |
| HOXC11 | homeobox C11 |
| INHBB | inhibin, beta B |
| IRS1 | insulin receptor substrate 1 |
| IRX5 | iroquois homeobox 5 |
| KCNK1 | potassium channel, two pore domain subfamily K, member 1 |
| KCTD15 | potassium channel tetramerization domain containing 15 |
| KEAP1 | kelch-like ECH-associated protein 1 |
| KIAA0125 | KIAA0125 |
| LMNB1 | lamin B1 |
| LUC7L2 | LUC7-like 2 (S. cerevisiae) |
| MEPCE | methylphosphate capping enzyme |
| METTL8 | methyltransferase like 8 |
| MSL1 | male-specific lethal 1 homolog (Drosophila) |
| MYC | v-myc avian myelocytomatosis viral oncogene homolog |
| MYD88 | myeloid differentiation primary response 88 |
| NMI | N-myc (and STAT) interactor |
| NPY1R | neuropeptide Y receptor Y1 |
| NR1H2 | nuclear receptor subfamily 1, group H, member 2 |
| NRIP1 | nuclear receptor interacting protein 1 |
| P2RY6 | pyrimidinergic receptor P2Y, G-protein coupled, 6 |
| PCNT | pericentrin |
| PGGT1B | protein geranylgeranyltransferase type I, beta subunit |
| PHLDA3 | pleckstrin homology-like domain, family A, member 3 |
| PLK1 | polo-like kinase 1 |
| POGK | pogo transposable element with KRAB domain |
| PRNP | prion protein |
| PRR15L | proline rich 15-like |
| PTPN9 | protein tyrosine phosphatase, non-receptor type 9 |
| RASGRP1 | RAS guanyl releasing protein 1 (calcium and DAG-regulated) |
| RBM23 | RNA binding motif protein 23 |
| RGS19 | regulator of G-protein signaling 19 |
| RRS1 | RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) |
| SEMA4C | sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C |
| SETD1B | SET domain containing 1B |
| SFMBT1 | Scm-like with four mbt domains 1 |
| SLC27A6 | solute carrier family 27 (fatty acid transporter), member 6 |
| SLC35F2 | solute carrier family 35, member F2 |
| SMAD7 | SMAD family member 7 |
| SREK1 | splicing regulatory glutamine/lysine-rich protein 1 |
| SRSF4 | serine/arginine-rich splicing factor 4 |
| SRSF8 | serine/arginine-rich splicing factor 8 |
| STBD1 | starch binding domain 1 |
| STC2 | stanniocalcin 2 |
| TGIF1 | TGFB-induced factor homeobox 1 |
| TMEM30B | transmembrane protein 30B |
| TRAF5 | TNF receptor-associated factor 5 |
| TRIB3 | tribbles pseudokinase 3 |
| TRIM16 | tripartite motif containing 16 |
| TRIM8 | tripartite motif containing 8 |
| TRPS1 | trichorhinophalangeal syndrome I |
| TSKU | tsukushi, small leucine rich proteoglycan |
| TSSC4 | tumor suppressing subtransferable candidate 4 |
| UBL4A | ubiquitin-like 4A |
| UBTF | upstream binding transcription factor, RNA polymerase I |
| UCK2 | uridine-cytidine kinase 2 |
| USP21 | ubiquitin specific peptidase 21 |
| XBP1 | X-box binding protein 1 |
| ZC3H4 | zinc finger CCCH-type containing 4 |
| ZHX2 | zinc fingers and homeoboxes 2 |
| ZIC1 | Zic family member 1 |
| ZNF253 | zinc finger protein 253 |
| ZNF32 | zinc finger protein 32 |
| ZNF408 | zinc finger protein 408 |
| ZNF692 | zinc finger protein 692 |
