| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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199 genes differentially expressed following the trichostatin A-7005 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| ABHD6 | abhydrolase domain containing 6 |
| ACSF2 | acyl-CoA synthetase family member 2 |
| ADD3 | adducin 3 (gamma) |
| ADM | adrenomedullin |
| AHNAK2 | AHNAK nucleoprotein 2 |
| AKAP12 | A kinase (PRKA) anchor protein 12 |
| ALDOC | aldolase C, fructose-bisphosphate |
| ARMCX2 | armadillo repeat containing, X-linked 2 |
| BAIAP2 | BAI1-associated protein 2 |
| BIK | BCL2-interacting killer (apoptosis-inducing) |
| BMP7 | bone morphogenetic protein 7 |
| BNIP3L | BCL2/adenovirus E1B 19kDa interacting protein 3-like |
| BTN2A2 | butyrophilin, subfamily 2, member A2 |
| CD302 | CD302 molecule |
| CDKL3 | cyclin-dependent kinase-like 3 |
| CDKN2D | cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) |
| CLGN | calmegin |
| CRISPLD2 | cysteine-rich secretory protein LCCL domain containing 2 |
| CSRP2 | cysteine and glycine-rich protein 2 |
| CXADR | coxsackie virus and adenovirus receptor |
| CXCR4 | chemokine (C-X-C motif) receptor 4 |
| CYLD | cylindromatosis (turban tumor syndrome) |
| CYP46A1 | cytochrome P450, family 46, subfamily A, polypeptide 1 |
| DEGS1 | delta(4)-desaturase, sphingolipid 1 |
| DHRS2 | dehydrogenase/reductase (SDR family) member 2 |
| DIXDC1 | DIX domain containing 1 |
| DNAJB4 | DnaJ (Hsp40) homolog, subfamily B, member 4 |
| DNAJC12 | DnaJ (Hsp40) homolog, subfamily C, member 12 |
| DPYSL4 | dihydropyrimidinase-like 4 |
| DZANK1 | double zinc ribbon and ankyrin repeat domains 1 |
| EFNB3 | ephrin-B3 |
| FKBP1B | FK506 binding protein 1B, 12.6 kDa |
| FSCN1 | fascin actin-bundling protein 1 |
| FYN | FYN proto-oncogene, Src family tyrosine kinase |
| GEM | GTP binding protein overexpressed in skeletal muscle |
| GLRX | glutaredoxin (thioltransferase) |
| GLS | glutaminase |
| GRK5 | G protein-coupled receptor kinase 5 |
| GTF2B | general transcription factor IIB |
| HEY1 | hes-related family bHLH transcription factor with YRPW motif 1 |
| HSD17B11 | hydroxysteroid (17-beta) dehydrogenase 11 |
| IRF6 | interferon regulatory factor 6 |
| KIAA0355 | KIAA0355 |
| KIAA0513 | KIAA0513 |
| KIF5C | kinesin family member 5C |
| LIMA1 | LIM domain and actin binding 1 |
| MAPRE2 | microtubule-associated protein, RP/EB family, member 2 |
| MLF1 | myeloid leukemia factor 1 |
| MMD | monocyte to macrophage differentiation-associated |
| MXI1 | MAX interactor 1, dimerization protein |
| MXRA7 | matrix-remodelling associated 7 |
| NEAT1 | nuclear paraspeckle assembly transcript 1 (non-protein coding) |
| NME7 | NME/NM23 family member 7 |
| NPC1 | Niemann-Pick disease, type C1 |
| NXN | nucleoredoxin |
| OASL | 2'-5'-oligoadenylate synthetase-like |
| PADI3 | peptidyl arginine deiminase, type III |
| PDE4DIP | phosphodiesterase 4D interacting protein |
| PDP1 | pyruvate dehyrogenase phosphatase catalytic subunit 1 |
| PIK3CD | phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit delta |
| PPARD | peroxisome proliferator-activated receptor delta |
| PRPH | peripherin |
| PSMB9 | proteasome (prosome, macropain) subunit, beta type, 9 |
| PTRF | polymerase I and transcript release factor |
| RAB11FIP1 | RAB11 family interacting protein 1 (class I) |
| RAB40B | RAB40B, member RAS oncogene family |
| RAI2 | retinoic acid induced 2 |
| RGL1 | ral guanine nucleotide dissociation stimulator-like 1 |
| RGS2 | regulator of G-protein signaling 2 |
| RPS6KA5 | ribosomal protein S6 kinase, 90kDa, polypeptide 5 |
| RTN2 | reticulon 2 |
| RUNDC3B | RUN domain containing 3B |
| SAT1 | spermidine/spermine N1-acetyltransferase 1 |
| SEPP1 | selenoprotein P, plasma, 1 |
| SERPINB5 | serpin peptidase inhibitor, clade B (ovalbumin), member 5 |
| SERPINB9 | serpin peptidase inhibitor, clade B (ovalbumin), member 9 |
| SERPINI1 | serpin peptidase inhibitor, clade I (neuroserpin), member 1 |
| SH2B3 | SH2B adaptor protein 3 |
| SH3GL3 | SH3-domain GRB2-like 3 |
| SIRT4 | sirtuin 4 |
| SNN | stannin |
| SPSB3 | splA/ryanodine receptor domain and SOCS box containing 3 |
| ST3GAL5 | ST3 beta-galactoside alpha-2,3-sialyltransferase 5 |
| STK17B | serine/threonine kinase 17b |
| STON1 | stonin 1 |
| STXBP1 | syntaxin binding protein 1 |
| TMSB15A | thymosin beta 15a |
| TNFAIP3 | tumor necrosis factor, alpha-induced protein 3 |
| TUBA4A | tubulin, alpha 4a |
| TUBB2A | tubulin, beta 2A class IIa |
| TUFT1 | tuftelin 1 |
| TXNIP | thioredoxin interacting protein |
| ULBP2 | UL16 binding protein 2 |
| UNC119 | unc-119 homolog (C. elegans) |
| WDR19 | WD repeat domain 19 |
| WDR47 | WD repeat domain 47 |
| ZCCHC24 | zinc finger, CCHC domain containing 24 |
| ZNF10 | zinc finger protein 10 |
| ZNF204P | zinc finger protein 204, pseudogene |
| Symbol | Name |
|---|---|
| ACKR3 | atypical chemokine receptor 3 |
| ADGRA3 | adhesion G protein-coupled receptor A3 |
| ADNP | activity-dependent neuroprotector homeobox |
| AEN | apoptosis enhancing nuclease |
| AKAP8 | A kinase (PRKA) anchor protein 8 |
| AP5S1 | adaptor-related protein complex 5, sigma 1 subunit |
| ARHGEF16 | Rho guanine nucleotide exchange factor (GEF) 16 |
| BAGE | B melanoma antigen |
| BRINP3 | bone morphogenetic protein/retinoic acid inducible neural-specific 3 |
| C11ORF68 | chromosome 11 open reading frame 68 |
| C9ORF91 | chromosome 9 open reading frame 91 |
| CBFA2T3 | core-binding factor, runt domain, alpha subunit 2; translocated to, 3 |
| CBR3 | carbonyl reductase 3 |
| CCDC170 | coiled-coil domain containing 170 |
| CCND1 | cyclin D1 |
| COA7 | cytochrome c oxidase assembly factor 7 (putative) |
| COIL | coilin |
| CTCF | CCCTC-binding factor (zinc finger protein) |
| CUL1 | cullin 1 |
| CXCL12 | chemokine (C-X-C motif) ligand 12 |
| DKK1 | dickkopf WNT signaling pathway inhibitor 1 |
| DNAJC7 | DnaJ (Hsp40) homolog, subfamily C, member 7 |
| EGR3 | early growth response 3 |
| FAM57A | family with sequence similarity 57, member A |
| FJX1 | four jointed box 1 (Drosophila) |
| FOXA1 | forkhead box A1 |
| FOXC1 | forkhead box C1 |
| GABPB1 | GA binding protein transcription factor, beta subunit 1 |
| GATA3 | GATA binding protein 3 |
| GTF2I | general transcription factor IIi |
| H2AFY2 | H2A histone family, member Y2 |
| HIRIP3 | HIRA interacting protein 3 |
| IFNGR2 | interferon gamma receptor 2 (interferon gamma transducer 1) |
| INHBB | inhibin, beta B |
| IRS1 | insulin receptor substrate 1 |
| IRX5 | iroquois homeobox 5 |
| JADE1 | jade family PHD finger 1 |
| KEAP1 | kelch-like ECH-associated protein 1 |
| KIAA0753 | KIAA0753 |
| LAMA5 | laminin, alpha 5 |
| LMNB1 | lamin B1 |
| LOXL1 | lysyl oxidase-like 1 |
| LRFN4 | leucine rich repeat and fibronectin type III domain containing 4 |
| LTBR | lymphotoxin beta receptor (TNFR superfamily, member 3) |
| LUC7L2 | LUC7-like 2 (S. cerevisiae) |
| LY6G5C | lymphocyte antigen 6 complex, locus G5C |
| MCM9 | minichromosome maintenance complex component 9 |
| MEPCE | methylphosphate capping enzyme |
| METTL1 | methyltransferase like 1 |
| MLPH | melanophilin |
| MMACHC | methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria |
| MOCOS | molybdenum cofactor sulfurase |
| MSL1 | male-specific lethal 1 homolog (Drosophila) |
| MYC | v-myc avian myelocytomatosis viral oncogene homolog |
| NCSTN | nicastrin |
| NPY1R | neuropeptide Y receptor Y1 |
| NRIP1 | nuclear receptor interacting protein 1 |
| P2RX5 | purinergic receptor P2X, ligand gated ion channel, 5 |
| P2RY6 | pyrimidinergic receptor P2Y, G-protein coupled, 6 |
| PHLDA3 | pleckstrin homology-like domain, family A, member 3 |
| POGK | pogo transposable element with KRAB domain |
| PPAN | peter pan homolog (Drosophila) |
| PRR15L | proline rich 15-like |
| PRR7 | proline rich 7 (synaptic) |
| RABGGTA | Rab geranylgeranyltransferase, alpha subunit |
| RASGRP1 | RAS guanyl releasing protein 1 (calcium and DAG-regulated) |
| RBM23 | RNA binding motif protein 23 |
| RWDD3 | RWD domain containing 3 |
| SCAF8 | SR-related CTD-associated factor 8 |
| SETD1B | SET domain containing 1B |
| SFMBT1 | Scm-like with four mbt domains 1 |
| SLC25A15 | solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15 |
| SLC35F2 | solute carrier family 35, member F2 |
| SLC6A14 | solute carrier family 6 (amino acid transporter), member 14 |
| SLC9A2 | solute carrier family 9, subfamily A (NHE2, cation proton antiporter 2), member 2 |
| SLTM | SAFB-like, transcription modulator |
| SMAD7 | SMAD family member 7 |
| SMYD5 | SMYD family member 5 |
| SREK1 | splicing regulatory glutamine/lysine-rich protein 1 |
| ST6GALNAC2 | ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 |
| STC2 | stanniocalcin 2 |
| SUV39H1 | suppressor of variegation 3-9 homolog 1 (Drosophila) |
| TMEM30B | transmembrane protein 30B |
| TNFRSF1A | tumor necrosis factor receptor superfamily, member 1A |
| TRIB3 | tribbles pseudokinase 3 |
| TRIM16 | tripartite motif containing 16 |
| TRIM8 | tripartite motif containing 8 |
| TSKU | tsukushi, small leucine rich proteoglycan |
| UBL4A | ubiquitin-like 4A |
| UBTF | upstream binding transcription factor, RNA polymerase I |
| UBXN8 | UBX domain protein 8 |
| URGCP | upregulator of cell proliferation |
| WDR43 | WD repeat domain 43 |
| WDR74 | WD repeat domain 74 |
| XBP1 | X-box binding protein 1 |
| YAP1 | Yes-associated protein 1 |
| ZC3H4 | zinc finger CCCH-type containing 4 |
| ZHX2 | zinc fingers and homeoboxes 2 |
| ZIC1 | Zic family member 1 |
| ZNF33B | zinc finger protein 33B |
