| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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200 genes differentially expressed following the trichostatin A-7077 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| ABCG1 | ATP-binding cassette, sub-family G (WHITE), member 1 |
| ABHD17B | abhydrolase domain containing 17B |
| ABHD6 | abhydrolase domain containing 6 |
| ABTB2 | ankyrin repeat and BTB (POZ) domain containing 2 |
| ADM | adrenomedullin |
| ADRB2 | adrenoceptor beta 2, surface |
| AGFG2 | ArfGAP with FG repeats 2 |
| AIM1L | absent in melanoma 1-like |
| AKR7A3 | aldo-keto reductase family 7, member A3 (aflatoxin aldehyde reductase) |
| ANGPTL4 | angiopoietin-like 4 |
| AQP3 | aquaporin 3 (Gill blood group) |
| ARG2 | arginase 2 |
| ARNTL | aryl hydrocarbon receptor nuclear translocator-like |
| ASMTL | acetylserotonin O-methyltransferase-like |
| AVPI1 | arginine vasopressin-induced 1 |
| BAIAP2 | BAI1-associated protein 2 |
| BAMBI | BMP and activin membrane-bound inhibitor |
| BEX1 | brain expressed, X-linked 1 |
| BIRC3 | baculoviral IAP repeat containing 3 |
| BMP6 | bone morphogenetic protein 6 |
| CD55 | CD55 molecule, decay accelerating factor for complement (Cromer blood group) |
| CDKN1A | cyclin-dependent kinase inhibitor 1A (p21, Cip1) |
| CEP112 | centrosomal protein 112kDa |
| CFAP69 | cilia and flagella associated protein 69 |
| CHAC1 | ChaC glutathione-specific gamma-glutamylcyclotransferase 1 |
| CORO1A | coronin, actin binding protein, 1A |
| CPA4 | carboxypeptidase A4 |
| CPD | carboxypeptidase D |
| CPM | carboxypeptidase M |
| CRISPLD2 | cysteine-rich secretory protein LCCL domain containing 2 |
| CTGF | connective tissue growth factor |
| CTH | cystathionine gamma-lyase |
| CYR61 | cysteine-rich, angiogenic inducer, 61 |
| DDIT4 | DNA-damage-inducible transcript 4 |
| DENND3 | DENN/MADD domain containing 3 |
| DHRS2 | dehydrogenase/reductase (SDR family) member 2 |
| DNAJB1 | DnaJ (Hsp40) homolog, subfamily B, member 1 |
| DNAJC12 | DnaJ (Hsp40) homolog, subfamily C, member 12 |
| DUSP1 | dual specificity phosphatase 1 |
| DUSP10 | dual specificity phosphatase 10 |
| DUSP5 | dual specificity phosphatase 5 |
| EFNB2 | ephrin-B2 |
| EGR2 | early growth response 2 |
| EPHA4 | EPH receptor A4 |
| EPPK1 | epiplakin 1 |
| FABP4 | fatty acid binding protein 4, adipocyte |
| FAM134B | family with sequence similarity 134, member B |
| FLRT3 | fibronectin leucine rich transmembrane protein 3 |
| GCDH | glutaryl-CoA dehydrogenase |
| GEM | GTP binding protein overexpressed in skeletal muscle |
| GFPT2 | glutamine-fructose-6-phosphate transaminase 2 |
| GLS | glutaminase |
| GMCL1 | germ cell-less, spermatogenesis associated 1 |
| GPRC5A | G protein-coupled receptor, class C, group 5, member A |
| GTF2B | general transcription factor IIB |
| HBEGF | heparin-binding EGF-like growth factor |
| HMOX1 | heme oxygenase 1 |
| HOXA1 | homeobox A1 |
| IL11 | interleukin 11 |
| IL1RAP | interleukin 1 receptor accessory protein |
| INSIG1 | insulin induced gene 1 |
| IRF6 | interferon regulatory factor 6 |
| KCNJ2 | potassium channel, inwardly rectifying subfamily J, member 2 |
| KIAA0930 | KIAA0930 |
| LIFR | leukemia inhibitory factor receptor alpha |
| LMCD1 | LIM and cysteine-rich domains 1 |
| LPIN1 | lipin 1 |
| MERTK | MER proto-oncogene, tyrosine kinase |
| MMP1 | matrix metallopeptidase 1 |
| MSX2 | msh homeobox 2 |
| NEAT1 | nuclear paraspeckle assembly transcript 1 (non-protein coding) |
| NEDD9 | neural precursor cell expressed, developmentally down-regulated 9 |
| NEU1 | sialidase 1 (lysosomal sialidase) |
| NR4A1 | nuclear receptor subfamily 4, group A, member 1 |
| OASL | 2'-5'-oligoadenylate synthetase-like |
| PELI1 | pellino E3 ubiquitin protein ligase 1 |
| PER1 | period circadian clock 1 |
| PEX1 | peroxisomal biogenesis factor 1 |
| PI4K2A | phosphatidylinositol 4-kinase type 2 alpha |
| PTPN1 | protein tyrosine phosphatase, non-receptor type 1 |
| RAB11FIP1 | RAB11 family interacting protein 1 (class I) |
| RAI2 | retinoic acid induced 2 |
| RGL1 | ral guanine nucleotide dissociation stimulator-like 1 |
| RGS4 | regulator of G-protein signaling 4 |
| RHOB | ras homolog family member B |
| SERPINI1 | serpin peptidase inhibitor, clade I (neuroserpin), member 1 |
| SLC30A1 | solute carrier family 30 (zinc transporter), member 1 |
| SLC31A2 | solute carrier family 31 (copper transporter), member 2 |
| ST3GAL5 | ST3 beta-galactoside alpha-2,3-sialyltransferase 5 |
| STC1 | stanniocalcin 1 |
| SYT1 | synaptotagmin I |
| SYTL2 | synaptotagmin-like 2 |
| TJP3 | tight junction protein 3 |
| TMEM47 | transmembrane protein 47 |
| TRAFD1 | TRAF-type zinc finger domain containing 1 |
| TRIM62 | tripartite motif containing 62 |
| TUBB2B | tubulin, beta 2B class IIb |
| TUFT1 | tuftelin 1 |
| ZFP36 | ZFP36 ring finger protein |
| ZNF783 | zinc finger family member 783 |
| Symbol | Name |
|---|---|
| ADNP | activity-dependent neuroprotector homeobox |
| AP1G2 | adaptor-related protein complex 1, gamma 2 subunit |
| BCAR3 | breast cancer anti-estrogen resistance 3 |
| BCL7A | B-cell CLL/lymphoma 7A |
| BMI1 | BMI1 proto-oncogene, polycomb ring finger |
| C3ORF18 | chromosome 3 open reading frame 18 |
| CASD1 | CAS1 domain containing 1 |
| CBR3 | carbonyl reductase 3 |
| CENPA | centromere protein A |
| CLCF1 | cardiotrophin-like cytokine factor 1 |
| CTCF | CCCTC-binding factor (zinc finger protein) |
| CTDSP1 | CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 |
| CUL1 | cullin 1 |
| DCTN4 | dynactin 4 (p62) |
| DENND1B | DENN/MADD domain containing 1B |
| DEPDC1 | DEP domain containing 1 |
| DSN1 | DSN1, MIS12 kinetochore complex component |
| DUSP4 | dual specificity phosphatase 4 |
| E2F8 | E2F transcription factor 8 |
| FADD | Fas (TNFRSF6)-associated via death domain |
| FAIM | Fas apoptotic inhibitory molecule |
| FAM169A | family with sequence similarity 169, member A |
| FAM57A | family with sequence similarity 57, member A |
| FJX1 | four jointed box 1 (Drosophila) |
| FOSL1 | FOS-like antigen 1 |
| FOXA1 | forkhead box A1 |
| FST | follistatin |
| GUCY1A3 | guanylate cyclase 1, soluble, alpha 3 |
| H2AFY2 | H2A histone family, member Y2 |
| HAS2 | hyaluronan synthase 2 |
| HMGA2 | high mobility group AT-hook 2 |
| HMGXB4 | HMG box domain containing 4 |
| HOOK1 | hook microtubule-tethering protein 1 |
| HSPB8 | heat shock 22kDa protein 8 |
| IL33 | interleukin 33 |
| IL4R | interleukin 4 receptor |
| INHBB | inhibin, beta B |
| IRS1 | insulin receptor substrate 1 |
| KAT6B | K(lysine) acetyltransferase 6B |
| KEAP1 | kelch-like ECH-associated protein 1 |
| LMNB1 | lamin B1 |
| LPAR1 | lysophosphatidic acid receptor 1 |
| LRIF1 | ligand dependent nuclear receptor interacting factor 1 |
| LUC7L2 | LUC7-like 2 (S. cerevisiae) |
| MANSC1 | MANSC domain containing 1 |
| MCM9 | minichromosome maintenance complex component 9 |
| MEPCE | methylphosphate capping enzyme |
| METTL4 | methyltransferase like 4 |
| MEX3C | mex-3 RNA binding family member C |
| NDC80 | NDC80 kinetochore complex component |
| NHEJ1 | nonhomologous end-joining factor 1 |
| NRIP1 | nuclear receptor interacting protein 1 |
| NSD1 | nuclear receptor binding SET domain protein 1 |
| NUP62 | nucleoporin 62kDa |
| NUPR1 | nuclear protein, transcriptional regulator, 1 |
| PALMD | palmdelphin |
| PCNT | pericentrin |
| PPAN | peter pan homolog (Drosophila) |
| PPAP2B | phosphatidic acid phosphatase type 2B |
| PRKRIP1 | PRKR interacting protein 1 (IL11 inducible) |
| PSMD7 | proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 |
| PTPN9 | protein tyrosine phosphatase, non-receptor type 9 |
| RBM23 | RNA binding motif protein 23 |
| RIN2 | Ras and Rab interactor 2 |
| RIPPLY3 | ripply transcriptional repressor 3 |
| SCAF8 | SR-related CTD-associated factor 8 |
| SERPINH1 | serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1) |
| SETD1B | SET domain containing 1B |
| SETMAR | SET domain and mariner transposase fusion gene |
| SH2D4A | SH2 domain containing 4A |
| SIDT1 | SID1 transmembrane family, member 1 |
| SIM2 | single-minded family bHLH transcription factor 2 |
| SLC25A15 | solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15 |
| SMAGP | small cell adhesion glycoprotein |
| SMPDL3A | sphingomyelin phosphodiesterase, acid-like 3A |
| SNX5 | sorting nexin 5 |
| SPRY2 | sprouty homolog 2 (Drosophila) |
| SREK1 | splicing regulatory glutamine/lysine-rich protein 1 |
| SRSF4 | serine/arginine-rich splicing factor 4 |
| SUV39H1 | suppressor of variegation 3-9 homolog 1 (Drosophila) |
| TARBP2 | TAR (HIV-1) RNA binding protein 2 |
| TCERG1 | transcription elongation regulator 1 |
| TEX264 | testis expressed 264 |
| TGFB1I1 | transforming growth factor beta 1 induced transcript 1 |
| TOE1 | target of EGR1, member 1 (nuclear) |
| TRIB3 | tribbles pseudokinase 3 |
| TRIM8 | tripartite motif containing 8 |
| TRMT11 | tRNA methyltransferase 11 homolog (S. cerevisiae) |
| TSSC4 | tumor suppressing subtransferable candidate 4 |
| TWF2 | twinfilin actin binding protein 2 |
| VEGFC | vascular endothelial growth factor C |
| XBP1 | X-box binding protein 1 |
| ZBED8 | zinc finger, BED-type containing 8 |
| ZBTB44 | zinc finger and BTB domain containing 44 |
| ZC3H4 | zinc finger CCCH-type containing 4 |
| ZNF165 | zinc finger protein 165 |
| ZNF248 | zinc finger protein 248 |
| ZNF32 | zinc finger protein 32 |
| ZNF692 | zinc finger protein 692 |
| ZZZ3 | zinc finger, ZZ-type containing 3 |
