| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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200 genes differentially expressed following the trichostatin A-7245 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| ABHD6 | abhydrolase domain containing 6 |
| ABTB2 | ankyrin repeat and BTB (POZ) domain containing 2 |
| ADM | adrenomedullin |
| AGTR1 | angiotensin II receptor, type 1 |
| AQP3 | aquaporin 3 (Gill blood group) |
| AREG | amphiregulin |
| ARNTL | aryl hydrocarbon receptor nuclear translocator-like |
| ASMTL | acetylserotonin O-methyltransferase-like |
| ATP8A1 | ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 |
| AVPI1 | arginine vasopressin-induced 1 |
| BAIAP2 | BAI1-associated protein 2 |
| BAMBI | BMP and activin membrane-bound inhibitor |
| C18ORF8 | chromosome 18 open reading frame 8 |
| CDC42EP3 | CDC42 effector protein (Rho GTPase binding) 3 |
| CDKN1A | cyclin-dependent kinase inhibitor 1A (p21, Cip1) |
| CFAP69 | cilia and flagella associated protein 69 |
| CORO1A | coronin, actin binding protein, 1A |
| CPM | carboxypeptidase M |
| CRISPLD2 | cysteine-rich secretory protein LCCL domain containing 2 |
| CTGF | connective tissue growth factor |
| CTH | cystathionine gamma-lyase |
| CXCR4 | chemokine (C-X-C motif) receptor 4 |
| CYB5R1 | cytochrome b5 reductase 1 |
| CYR61 | cysteine-rich, angiogenic inducer, 61 |
| DNAJB1 | DnaJ (Hsp40) homolog, subfamily B, member 1 |
| DNAJC12 | DnaJ (Hsp40) homolog, subfamily C, member 12 |
| DNAJC6 | DnaJ (Hsp40) homolog, subfamily C, member 6 |
| DUSP1 | dual specificity phosphatase 1 |
| DUSP10 | dual specificity phosphatase 10 |
| DUSP5 | dual specificity phosphatase 5 |
| EFNA3 | ephrin-A3 |
| EFNB2 | ephrin-B2 |
| ELOVL4 | ELOVL fatty acid elongase 4 |
| EPB41L5 | erythrocyte membrane protein band 4.1 like 5 |
| FABP4 | fatty acid binding protein 4, adipocyte |
| FAM69A | family with sequence similarity 69, member A |
| FGFR1 | fibroblast growth factor receptor 1 |
| FYN | FYN proto-oncogene, Src family tyrosine kinase |
| GLS | glutaminase |
| GMPR | guanosine monophosphate reductase |
| GPRC5A | G protein-coupled receptor, class C, group 5, member A |
| GTF2B | general transcription factor IIB |
| GUCY1B3 | guanylate cyclase 1, soluble, beta 3 |
| H1F0 | H1 histone family, member 0 |
| H1FX | H1 histone family, member X |
| HBEGF | heparin-binding EGF-like growth factor |
| HOXA1 | homeobox A1 |
| IGSF3 | immunoglobulin superfamily, member 3 |
| IL11 | interleukin 11 |
| INSIG1 | insulin induced gene 1 |
| IRF6 | interferon regulatory factor 6 |
| IRS2 | insulin receptor substrate 2 |
| KCNJ2 | potassium channel, inwardly rectifying subfamily J, member 2 |
| KCNN1 | potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 1 |
| KIF5C | kinesin family member 5C |
| KLF2 | Kruppel-like factor 2 |
| LMCD1 | LIM and cysteine-rich domains 1 |
| MAP2K3 | mitogen-activated protein kinase kinase 3 |
| MAPRE2 | microtubule-associated protein, RP/EB family, member 2 |
| MLF1 | myeloid leukemia factor 1 |
| NEAT1 | nuclear paraspeckle assembly transcript 1 (non-protein coding) |
| NEDD4L | neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase |
| NFIL3 | nuclear factor, interleukin 3 regulated |
| NR4A2 | nuclear receptor subfamily 4, group A, member 2 |
| NRXN3 | neurexin 3 |
| PCDH9 | protocadherin 9 |
| PDE4DIP | phosphodiesterase 4D interacting protein |
| PELI2 | pellino E3 ubiquitin protein ligase family member 2 |
| PI4K2A | phosphatidylinositol 4-kinase type 2 alpha |
| PKP2 | plakophilin 2 |
| PLK2 | polo-like kinase 2 |
| PTCH1 | patched 1 |
| PTGER4 | prostaglandin E receptor 4 (subtype EP4) |
| PTPN13 | protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) |
| RAB11FIP1 | RAB11 family interacting protein 1 (class I) |
| RAI2 | retinoic acid induced 2 |
| RGL1 | ral guanine nucleotide dissociation stimulator-like 1 |
| RGS4 | regulator of G-protein signaling 4 |
| RNF24 | ring finger protein 24 |
| SCML1 | sex comb on midleg-like 1 (Drosophila) |
| SERPINE1 | serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 |
| SERPINI1 | serpin peptidase inhibitor, clade I (neuroserpin), member 1 |
| SH3GL3 | SH3-domain GRB2-like 3 |
| SHROOM2 | shroom family member 2 |
| SLC25A44 | solute carrier family 25, member 44 |
| SLC30A1 | solute carrier family 30 (zinc transporter), member 1 |
| SLC9A3R1 | solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 1 |
| ST3GAL5 | ST3 beta-galactoside alpha-2,3-sialyltransferase 5 |
| STC1 | stanniocalcin 1 |
| STK17B | serine/threonine kinase 17b |
| STOM | stomatin |
| SYT1 | synaptotagmin I |
| TAOK3 | TAO kinase 3 |
| TBPL1 | TBP-like 1 |
| TESK2 | testis-specific kinase 2 |
| TMEM47 | transmembrane protein 47 |
| TRAFD1 | TRAF-type zinc finger domain containing 1 |
| TUBB2B | tubulin, beta 2B class IIb |
| TUFT1 | tuftelin 1 |
| ZFP36 | ZFP36 ring finger protein |
| Symbol | Name |
|---|---|
| ADNP | activity-dependent neuroprotector homeobox |
| ARSJ | arylsulfatase family, member J |
| BCAR3 | breast cancer anti-estrogen resistance 3 |
| BHLHE41 | basic helix-loop-helix family, member e41 |
| BNC2 | basonuclin 2 |
| CASD1 | CAS1 domain containing 1 |
| CBR3 | carbonyl reductase 3 |
| CLASP1 | cytoplasmic linker associated protein 1 |
| COIL | coilin |
| CTCF | CCCTC-binding factor (zinc finger protein) |
| CTDSP1 | CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 |
| CUL1 | cullin 1 |
| DEPDC1 | DEP domain containing 1 |
| DET1 | de-etiolated homolog 1 (Arabidopsis) |
| DOLK | dolichol kinase |
| DSN1 | DSN1, MIS12 kinetochore complex component |
| EXOSC10 | exosome component 10 |
| FJX1 | four jointed box 1 (Drosophila) |
| FOXA1 | forkhead box A1 |
| FST | follistatin |
| GBX2 | gastrulation brain homeobox 2 |
| GTF2IRD1 | GTF2I repeat domain containing 1 |
| HAS2 | hyaluronan synthase 2 |
| HMGA2 | high mobility group AT-hook 2 |
| INHBB | inhibin, beta B |
| INPP5E | inositol polyphosphate-5-phosphatase, 72 kDa |
| INPPL1 | inositol polyphosphate phosphatase-like 1 |
| ITPKB | inositol-trisphosphate 3-kinase B |
| KAT6B | K(lysine) acetyltransferase 6B |
| KEAP1 | kelch-like ECH-associated protein 1 |
| KIF15 | kinesin family member 15 |
| LANCL2 | LanC lantibiotic synthetase component C-like 2 (bacterial) |
| LIF | leukemia inhibitory factor |
| LMNB1 | lamin B1 |
| LPAR1 | lysophosphatidic acid receptor 1 |
| LRFN4 | leucine rich repeat and fibronectin type III domain containing 4 |
| MEPCE | methylphosphate capping enzyme |
| MMACHC | methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria |
| MSL1 | male-specific lethal 1 homolog (Drosophila) |
| MTIF2 | mitochondrial translational initiation factor 2 |
| NFIC | nuclear factor I/C (CCAAT-binding transcription factor) |
| NFKB1 | nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 |
| NME6 | NME/NM23 nucleoside diphosphate kinase 6 |
| NMI | N-myc (and STAT) interactor |
| NR1H2 | nuclear receptor subfamily 1, group H, member 2 |
| NSD1 | nuclear receptor binding SET domain protein 1 |
| NSMAF | neutral sphingomyelinase (N-SMase) activation associated factor |
| NUAK1 | NUAK family, SNF1-like kinase, 1 |
| NUP62 | nucleoporin 62kDa |
| PAGR1 | PAXIP1 associated glutamate-rich protein 1 |
| PARP4 | poly (ADP-ribose) polymerase family, member 4 |
| PCNT | pericentrin |
| PHF11 | PHD finger protein 11 |
| PMM2 | phosphomannomutase 2 |
| POLR3E | polymerase (RNA) III (DNA directed) polypeptide E (80kD) |
| PPAP2B | phosphatidic acid phosphatase type 2B |
| PRCC | papillary renal cell carcinoma (translocation-associated) |
| QRICH1 | glutamine-rich 1 |
| RBM23 | RNA binding motif protein 23 |
| RBM39 | RNA binding motif protein 39 |
| RBM4B | RNA binding motif protein 4B |
| RIN2 | Ras and Rab interactor 2 |
| RPRD2 | regulation of nuclear pre-mRNA domain containing 2 |
| SCAF8 | SR-related CTD-associated factor 8 |
| SCO2 | SCO2 cytochrome c oxidase assembly protein |
| SERPINH1 | serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1) |
| SETMAR | SET domain and mariner transposase fusion gene |
| SIM2 | single-minded family bHLH transcription factor 2 |
| SLC14A1 | solute carrier family 14 (urea transporter), member 1 (Kidd blood group) |
| SLC39A1 | solute carrier family 39 (zinc transporter), member 1 |
| SMA4 | glucuronidase, beta pseudogene |
| SMAGP | small cell adhesion glycoprotein |
| SNUPN | snurportin 1 |
| SPHK1 | sphingosine kinase 1 |
| SREK1 | splicing regulatory glutamine/lysine-rich protein 1 |
| SRSF4 | serine/arginine-rich splicing factor 4 |
| STRN4 | striatin, calmodulin binding protein 4 |
| STXBP3 | syntaxin binding protein 3 |
| TAF5 | TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa |
| TCEAL1 | transcription elongation factor A (SII)-like 1 |
| TCERG1 | transcription elongation regulator 1 |
| TGFB1I1 | transforming growth factor beta 1 induced transcript 1 |
| TMPO | thymopoietin |
| TOE1 | target of EGR1, member 1 (nuclear) |
| TRIB3 | tribbles pseudokinase 3 |
| TSSC4 | tumor suppressing subtransferable candidate 4 |
| TUBGCP5 | tubulin, gamma complex associated protein 5 |
| UBL4A | ubiquitin-like 4A |
| UBXN8 | UBX domain protein 8 |
| VEGFC | vascular endothelial growth factor C |
| WARS2 | tryptophanyl tRNA synthetase 2, mitochondrial |
| WBSCR16 | Williams-Beuren syndrome chromosome region 16 |
| YARS2 | tyrosyl-tRNA synthetase 2, mitochondrial |
| ZC3H4 | zinc finger CCCH-type containing 4 |
| ZNF282 | zinc finger protein 282 |
| ZNF32 | zinc finger protein 32 |
| ZNF532 | zinc finger protein 532 |
| ZNF562 | zinc finger protein 562 |
| ZNF692 | zinc finger protein 692 |
| ZZZ3 | zinc finger, ZZ-type containing 3 |
