| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
| Downloads & Tools |
199 genes differentially expressed following the trichostatin A-7453 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| ACSBG1 | acyl-CoA synthetase bubblegum family member 1 |
| ACSF2 | acyl-CoA synthetase family member 2 |
| ADM | adrenomedullin |
| AHNAK2 | AHNAK nucleoprotein 2 |
| AKAP12 | A kinase (PRKA) anchor protein 12 |
| ALDOC | aldolase C, fructose-bisphosphate |
| ARL4C | ADP-ribosylation factor-like 4C |
| ARMCX2 | armadillo repeat containing, X-linked 2 |
| BAIAP2 | BAI1-associated protein 2 |
| CCDC28A | coiled-coil domain containing 28A |
| CDKN2D | cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) |
| CLGN | calmegin |
| CORO1A | coronin, actin binding protein, 1A |
| CRISPLD2 | cysteine-rich secretory protein LCCL domain containing 2 |
| CSRP2 | cysteine and glycine-rich protein 2 |
| CXADR | coxsackie virus and adenovirus receptor |
| CXCR4 | chemokine (C-X-C motif) receptor 4 |
| CYB5R1 | cytochrome b5 reductase 1 |
| CYP46A1 | cytochrome P450, family 46, subfamily A, polypeptide 1 |
| DHRS2 | dehydrogenase/reductase (SDR family) member 2 |
| DLX2 | distal-less homeobox 2 |
| DNAJB4 | DnaJ (Hsp40) homolog, subfamily B, member 4 |
| DNAJC12 | DnaJ (Hsp40) homolog, subfamily C, member 12 |
| DNAJC6 | DnaJ (Hsp40) homolog, subfamily C, member 6 |
| DPYSL4 | dihydropyrimidinase-like 4 |
| DUSP10 | dual specificity phosphatase 10 |
| EFNA3 | ephrin-A3 |
| EFNB3 | ephrin-B3 |
| EHBP1L1 | EH domain binding protein 1-like 1 |
| ELOVL4 | ELOVL fatty acid elongase 4 |
| EPOR | erythropoietin receptor |
| FADS3 | fatty acid desaturase 3 |
| FKBP1B | FK506 binding protein 1B, 12.6 kDa |
| FSCN1 | fascin actin-bundling protein 1 |
| FYN | FYN proto-oncogene, Src family tyrosine kinase |
| GCHFR | GTP cyclohydrolase I feedback regulator |
| GEM | GTP binding protein overexpressed in skeletal muscle |
| GLDC | glycine dehydrogenase (decarboxylating) |
| GLRX | glutaredoxin (thioltransferase) |
| GRK5 | G protein-coupled receptor kinase 5 |
| GSDMB | gasdermin B |
| GTF2B | general transcription factor IIB |
| HEY1 | hes-related family bHLH transcription factor with YRPW motif 1 |
| HSD17B11 | hydroxysteroid (17-beta) dehydrogenase 11 |
| INPP5B | inositol polyphosphate-5-phosphatase, 75kDa |
| IRF6 | interferon regulatory factor 6 |
| JAG1 | jagged 1 |
| KIAA0513 | KIAA0513 |
| KIF5C | kinesin family member 5C |
| KLHL24 | kelch-like family member 24 |
| LIMA1 | LIM domain and actin binding 1 |
| LYST | lysosomal trafficking regulator |
| MAPRE2 | microtubule-associated protein, RP/EB family, member 2 |
| MARK4 | MAP/microtubule affinity-regulating kinase 4 |
| MVP | major vault protein |
| NEK1 | NIMA-related kinase 1 |
| NME5 | NME/NM23 family member 5 |
| NME7 | NME/NM23 family member 7 |
| NPC1 | Niemann-Pick disease, type C1 |
| NUP62CL | nucleoporin 62kDa C-terminal like |
| NXN | nucleoredoxin |
| PAIP2B | poly(A) binding protein interacting protein 2B |
| PBXIP1 | pre-B-cell leukemia homeobox interacting protein 1 |
| PCDH9 | protocadherin 9 |
| PPARD | peroxisome proliferator-activated receptor delta |
| PRPH | peripherin |
| PTRF | polymerase I and transcript release factor |
| RAB3A | RAB3A, member RAS oncogene family |
| RAB40B | RAB40B, member RAS oncogene family |
| RGL1 | ral guanine nucleotide dissociation stimulator-like 1 |
| RGS2 | regulator of G-protein signaling 2 |
| RPS6KA2 | ribosomal protein S6 kinase, 90kDa, polypeptide 2 |
| RPS6KA5 | ribosomal protein S6 kinase, 90kDa, polypeptide 5 |
| RTN2 | reticulon 2 |
| RUNDC3B | RUN domain containing 3B |
| SAT1 | spermidine/spermine N1-acetyltransferase 1 |
| SEPP1 | selenoprotein P, plasma, 1 |
| SERPINB5 | serpin peptidase inhibitor, clade B (ovalbumin), member 5 |
| SERPINB9 | serpin peptidase inhibitor, clade B (ovalbumin), member 9 |
| SERPINI1 | serpin peptidase inhibitor, clade I (neuroserpin), member 1 |
| SH3GL3 | SH3-domain GRB2-like 3 |
| SLC17A7 | solute carrier family 17 (vesicular glutamate transporter), member 7 |
| SLC26A2 | solute carrier family 26 (anion exchanger), member 2 |
| SLC30A3 | solute carrier family 30 (zinc transporter), member 3 |
| SNAI2 | snail family zinc finger 2 |
| ST3GAL5 | ST3 beta-galactoside alpha-2,3-sialyltransferase 5 |
| STON1 | stonin 1 |
| STXBP1 | syntaxin binding protein 1 |
| SYT11 | synaptotagmin XI |
| TRIM2 | tripartite motif containing 2 |
| TUFT1 | tuftelin 1 |
| WDR19 | WD repeat domain 19 |
| WIPI1 | WD repeat domain, phosphoinositide interacting 1 |
| ZBTB18 | zinc finger and BTB domain containing 18 |
| ZBTB48 | zinc finger and BTB domain containing 48 |
| ZCCHC24 | zinc finger, CCHC domain containing 24 |
| ZDHHC11 | zinc finger, DHHC-type containing 11 |
| ZNF10 | zinc finger protein 10 |
| ZNF204P | zinc finger protein 204, pseudogene |
| Symbol | Name |
|---|---|
| ACKR3 | atypical chemokine receptor 3 |
| ADNP | activity-dependent neuroprotector homeobox |
| AEN | apoptosis enhancing nuclease |
| AKAP8 | A kinase (PRKA) anchor protein 8 |
| AP4M1 | adaptor-related protein complex 4, mu 1 subunit |
| ARHGEF16 | Rho guanine nucleotide exchange factor (GEF) 16 |
| BCAR3 | breast cancer anti-estrogen resistance 3 |
| BRINP3 | bone morphogenetic protein/retinoic acid inducible neural-specific 3 |
| C7ORF49 | chromosome 7 open reading frame 49 |
| C9ORF91 | chromosome 9 open reading frame 91 |
| CALHM2 | calcium homeostasis modulator 2 |
| CAPN15 | calpain 15 |
| CASD1 | CAS1 domain containing 1 |
| CBFA2T3 | core-binding factor, runt domain, alpha subunit 2; translocated to, 3 |
| CCND1 | cyclin D1 |
| COIL | coilin |
| CTCF | CCCTC-binding factor (zinc finger protein) |
| CTDSP1 | CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 |
| CXCL12 | chemokine (C-X-C motif) ligand 12 |
| CYP20A1 | cytochrome P450, family 20, subfamily A, polypeptide 1 |
| DKK1 | dickkopf WNT signaling pathway inhibitor 1 |
| EGR3 | early growth response 3 |
| ERN2 | endoplasmic reticulum to nucleus signaling 2 |
| FAIM | Fas apoptotic inhibitory molecule |
| FJX1 | four jointed box 1 (Drosophila) |
| FOXA1 | forkhead box A1 |
| FOXD1 | forkhead box D1 |
| GABPB1 | GA binding protein transcription factor, beta subunit 1 |
| GATA3 | GATA binding protein 3 |
| GMEB2 | glucocorticoid modulatory element binding protein 2 |
| GNA13 | guanine nucleotide binding protein (G protein), alpha 13 |
| GRWD1 | glutamate-rich WD repeat containing 1 |
| GTF2I | general transcription factor IIi |
| GTF2IRD1 | GTF2I repeat domain containing 1 |
| HIVEP1 | human immunodeficiency virus type I enhancer binding protein 1 |
| INHBB | inhibin, beta B |
| IRS1 | insulin receptor substrate 1 |
| IRX5 | iroquois homeobox 5 |
| KAT5 | K(lysine) acetyltransferase 5 |
| KAT6B | K(lysine) acetyltransferase 6B |
| KEAP1 | kelch-like ECH-associated protein 1 |
| LMNB1 | lamin B1 |
| LRFN4 | leucine rich repeat and fibronectin type III domain containing 4 |
| LUC7L2 | LUC7-like 2 (S. cerevisiae) |
| MARC1 | mitochondrial amidoxime reducing component 1 |
| MCM9 | minichromosome maintenance complex component 9 |
| MEPCE | methylphosphate capping enzyme |
| MPPED2 | metallophosphoesterase domain containing 2 |
| MSL1 | male-specific lethal 1 homolog (Drosophila) |
| MYD88 | myeloid differentiation primary response 88 |
| NFIC | nuclear factor I/C (CCAAT-binding transcription factor) |
| NFKB1 | nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 |
| NME6 | NME/NM23 nucleoside diphosphate kinase 6 |
| NR2F2 | nuclear receptor subfamily 2, group F, member 2 |
| NRIP1 | nuclear receptor interacting protein 1 |
| NSD1 | nuclear receptor binding SET domain protein 1 |
| NUAK1 | NUAK family, SNF1-like kinase, 1 |
| PCBP1 | poly(rC) binding protein 1 |
| PHF11 | PHD finger protein 11 |
| PHLDA3 | pleckstrin homology-like domain, family A, member 3 |
| PLK1 | polo-like kinase 1 |
| POGK | pogo transposable element with KRAB domain |
| PRNP | prion protein |
| PTPN9 | protein tyrosine phosphatase, non-receptor type 9 |
| RASGRP1 | RAS guanyl releasing protein 1 (calcium and DAG-regulated) |
| RBM4B | RNA binding motif protein 4B |
| RIPPLY3 | ripply transcriptional repressor 3 |
| RRS1 | RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) |
| SCAF8 | SR-related CTD-associated factor 8 |
| SETD1B | SET domain containing 1B |
| SETD8 | SET domain containing (lysine methyltransferase) 8 |
| SIDT1 | SID1 transmembrane family, member 1 |
| SLC37A1 | solute carrier family 37 (glucose-6-phosphate transporter), member 1 |
| SLC6A14 | solute carrier family 6 (amino acid transporter), member 14 |
| SLTM | SAFB-like, transcription modulator |
| SMEK2 | SMEK homolog 2, suppressor of mek1 (Dictyostelium) |
| SMG9 | SMG9 nonsense mediated mRNA decay factor |
| SPHK1 | sphingosine kinase 1 |
| SREK1 | splicing regulatory glutamine/lysine-rich protein 1 |
| SRSF4 | serine/arginine-rich splicing factor 4 |
| STC2 | stanniocalcin 2 |
| SUV420H1 | suppressor of variegation 4-20 homolog 1 (Drosophila) |
| THEM6 | thioesterase superfamily member 6 |
| TMED1 | transmembrane emp24 protein transport domain containing 1 |
| TMEM30B | transmembrane protein 30B |
| TOE1 | target of EGR1, member 1 (nuclear) |
| TRIB3 | tribbles pseudokinase 3 |
| TRIM16 | tripartite motif containing 16 |
| TRIM8 | tripartite motif containing 8 |
| TRPS1 | trichorhinophalangeal syndrome I |
| TSKU | tsukushi, small leucine rich proteoglycan |
| TSSC4 | tumor suppressing subtransferable candidate 4 |
| UBTF | upstream binding transcription factor, RNA polymerase I |
| USE1 | unconventional SNARE in the ER 1 homolog (S. cerevisiae) |
| USP5 | ubiquitin specific peptidase 5 (isopeptidase T) |
| XBP1 | X-box binding protein 1 |
| ZC3H4 | zinc finger CCCH-type containing 4 |
| ZHX2 | zinc fingers and homeoboxes 2 |
| ZIC1 | Zic family member 1 |
| ZNF692 | zinc finger protein 692 |
