| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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199 genes differentially expressed following the trichostatin A-7499 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| ABCA7 | ATP-binding cassette, sub-family A (ABC1), member 7 |
| ACSBG1 | acyl-CoA synthetase bubblegum family member 1 |
| AHNAK2 | AHNAK nucleoprotein 2 |
| ALDOC | aldolase C, fructose-bisphosphate |
| ANGPTL4 | angiopoietin-like 4 |
| APLP1 | amyloid beta (A4) precursor-like protein 1 |
| ARL4C | ADP-ribosylation factor-like 4C |
| ASAP3 | ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 |
| ASPHD1 | aspartate beta-hydroxylase domain containing 1 |
| ATF7IP2 | activating transcription factor 7 interacting protein 2 |
| BAIAP2 | BAI1-associated protein 2 |
| BAIAP3 | BAI1-associated protein 3 |
| BMP7 | bone morphogenetic protein 7 |
| C8ORF60 | chromosome 8 open reading frame 60 |
| CDH15 | cadherin 15, type 1, M-cadherin (myotubule) |
| CDKN2D | cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) |
| CLMN | calmin (calponin-like, transmembrane) |
| CORO1A | coronin, actin binding protein, 1A |
| CRISPLD2 | cysteine-rich secretory protein LCCL domain containing 2 |
| CXADR | coxsackie virus and adenovirus receptor |
| CYLD | cylindromatosis (turban tumor syndrome) |
| CYP46A1 | cytochrome P450, family 46, subfamily A, polypeptide 1 |
| CYP4F2 | cytochrome P450, family 4, subfamily F, polypeptide 2 |
| DENND3 | DENN/MADD domain containing 3 |
| DHRS2 | dehydrogenase/reductase (SDR family) member 2 |
| DLX2 | distal-less homeobox 2 |
| DPYSL4 | dihydropyrimidinase-like 4 |
| DYRK3 | dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3 |
| EFNB3 | ephrin-B3 |
| ELOVL4 | ELOVL fatty acid elongase 4 |
| ETV5 | ets variant 5 |
| FKBP1B | FK506 binding protein 1B, 12.6 kDa |
| FLRT3 | fibronectin leucine rich transmembrane protein 3 |
| FSCN1 | fascin actin-bundling protein 1 |
| FYN | FYN proto-oncogene, Src family tyrosine kinase |
| GEM | GTP binding protein overexpressed in skeletal muscle |
| GLDC | glycine dehydrogenase (decarboxylating) |
| GLRX | glutaredoxin (thioltransferase) |
| GLS | glutaminase |
| GRK5 | G protein-coupled receptor kinase 5 |
| H1F0 | H1 histone family, member 0 |
| HEY1 | hes-related family bHLH transcription factor with YRPW motif 1 |
| HMHA1 | histocompatibility (minor) HA-1 |
| HYAL1 | hyaluronoglucosaminidase 1 |
| IRF7 | interferon regulatory factor 7 |
| ITPR1 | inositol 1,4,5-trisphosphate receptor, type 1 |
| JAKMIP2 | janus kinase and microtubule interacting protein 2 |
| KANK3 | KN motif and ankyrin repeat domains 3 |
| KIAA0513 | KIAA0513 |
| KIF13B | kinesin family member 13B |
| KIF5C | kinesin family member 5C |
| LIMA1 | LIM domain and actin binding 1 |
| LTB4R | leukotriene B4 receptor |
| LZTFL1 | leucine zipper transcription factor-like 1 |
| MAP1A | microtubule-associated protein 1A |
| MAPRE2 | microtubule-associated protein, RP/EB family, member 2 |
| MCOLN1 | mucolipin 1 |
| MUC3B | mucin 3B, cell surface associated |
| NPC1 | Niemann-Pick disease, type C1 |
| NXN | nucleoredoxin |
| PADI3 | peptidyl arginine deiminase, type III |
| PBXIP1 | pre-B-cell leukemia homeobox interacting protein 1 |
| PCDH9 | protocadherin 9 |
| PDE4DIP | phosphodiesterase 4D interacting protein |
| PER1 | period circadian clock 1 |
| PI4K2A | phosphatidylinositol 4-kinase type 2 alpha |
| PIK3CD | phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit delta |
| PLA2G15 | phospholipase A2, group XV |
| PLLP | plasmolipin |
| PMEL | premelanosome protein |
| PRPH | peripherin |
| PTPRCAP | protein tyrosine phosphatase, receptor type, C-associated protein |
| PTRF | polymerase I and transcript release factor |
| RAB3B | RAB3B, member RAS oncogene family |
| RGL1 | ral guanine nucleotide dissociation stimulator-like 1 |
| RGS2 | regulator of G-protein signaling 2 |
| RPL3L | ribosomal protein L3-like |
| RPS6KA2 | ribosomal protein S6 kinase, 90kDa, polypeptide 2 |
| RUNDC3B | RUN domain containing 3B |
| SAT1 | spermidine/spermine N1-acetyltransferase 1 |
| SEPP1 | selenoprotein P, plasma, 1 |
| SERPINB9 | serpin peptidase inhibitor, clade B (ovalbumin), member 9 |
| SERPINI1 | serpin peptidase inhibitor, clade I (neuroserpin), member 1 |
| SH3GL3 | SH3-domain GRB2-like 3 |
| SIRT4 | sirtuin 4 |
| SLC17A7 | solute carrier family 17 (vesicular glutamate transporter), member 7 |
| STON1 | stonin 1 |
| SUN1 | Sad1 and UNC84 domain containing 1 |
| SYBU | syntabulin (syntaxin-interacting) |
| SYT11 | synaptotagmin XI |
| TRAFD1 | TRAF-type zinc finger domain containing 1 |
| TSC2 | tuberous sclerosis 2 |
| TUBA4A | tubulin, alpha 4a |
| TUFT1 | tuftelin 1 |
| TXNIP | thioredoxin interacting protein |
| WDR19 | WD repeat domain 19 |
| ZCCHC14 | zinc finger, CCHC domain containing 14 |
| ZCCHC24 | zinc finger, CCHC domain containing 24 |
| ZDHHC11 | zinc finger, DHHC-type containing 11 |
| Symbol | Name |
|---|---|
| ACKR3 | atypical chemokine receptor 3 |
| ACVR2B | activin A receptor, type IIB |
| ADNP | activity-dependent neuroprotector homeobox |
| AKAP8 | A kinase (PRKA) anchor protein 8 |
| AMIGO2 | adhesion molecule with Ig-like domain 2 |
| AMOTL2 | angiomotin like 2 |
| ARHGAP11A | Rho GTPase activating protein 11A |
| ATAD2B | ATPase family, AAA domain containing 2B |
| BRINP3 | bone morphogenetic protein/retinoic acid inducible neural-specific 3 |
| C7ORF49 | chromosome 7 open reading frame 49 |
| C9ORF91 | chromosome 9 open reading frame 91 |
| CALHM2 | calcium homeostasis modulator 2 |
| CBFA2T3 | core-binding factor, runt domain, alpha subunit 2; translocated to, 3 |
| CCND1 | cyclin D1 |
| CDKN1B | cyclin-dependent kinase inhibitor 1B (p27, Kip1) |
| CHST15 | carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15 |
| CISH | cytokine inducible SH2-containing protein |
| COA7 | cytochrome c oxidase assembly factor 7 (putative) |
| COIL | coilin |
| CTCF | CCCTC-binding factor (zinc finger protein) |
| CUL1 | cullin 1 |
| DENND1B | DENN/MADD domain containing 1B |
| DKK1 | dickkopf WNT signaling pathway inhibitor 1 |
| DSCAM | Down syndrome cell adhesion molecule |
| EFNA1 | ephrin-A1 |
| EGR3 | early growth response 3 |
| FAM57A | family with sequence similarity 57, member A |
| FJX1 | four jointed box 1 (Drosophila) |
| FOXA1 | forkhead box A1 |
| FOXC1 | forkhead box C1 |
| GABPA | GA binding protein transcription factor, alpha subunit 60kDa |
| GABPB1 | GA binding protein transcription factor, beta subunit 1 |
| GATA3 | GATA binding protein 3 |
| GOLPH3 | golgi phosphoprotein 3 (coat-protein) |
| GTF2I | general transcription factor IIi |
| H2AFY2 | H2A histone family, member Y2 |
| HGSNAT | heparan-alpha-glucosaminide N-acetyltransferase |
| HNRNPF | heterogeneous nuclear ribonucleoprotein F |
| HOXC11 | homeobox C11 |
| IL4R | interleukin 4 receptor |
| INHBB | inhibin, beta B |
| IRS1 | insulin receptor substrate 1 |
| IRX5 | iroquois homeobox 5 |
| ITGA2 | integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) |
| ITPKB | inositol-trisphosphate 3-kinase B |
| JADE3 | jade family PHD finger 3 |
| KAT2A | K(lysine) acetyltransferase 2A |
| KEAP1 | kelch-like ECH-associated protein 1 |
| KIAA0125 | KIAA0125 |
| LUC7L2 | LUC7-like 2 (S. cerevisiae) |
| LY6G5C | lymphocyte antigen 6 complex, locus G5C |
| MEPCE | methylphosphate capping enzyme |
| MPPED2 | metallophosphoesterase domain containing 2 |
| MSL1 | male-specific lethal 1 homolog (Drosophila) |
| MYC | v-myc avian myelocytomatosis viral oncogene homolog |
| NFKB1 | nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 |
| NPY1R | neuropeptide Y receptor Y1 |
| NRIP1 | nuclear receptor interacting protein 1 |
| NSD1 | nuclear receptor binding SET domain protein 1 |
| NUAK1 | NUAK family, SNF1-like kinase, 1 |
| OPA3 | optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia) |
| PHLDA3 | pleckstrin homology-like domain, family A, member 3 |
| POGK | pogo transposable element with KRAB domain |
| POLR3B | polymerase (RNA) III (DNA directed) polypeptide B |
| PRR15L | proline rich 15-like |
| PTPN9 | protein tyrosine phosphatase, non-receptor type 9 |
| RALGPS2 | Ral GEF with PH domain and SH3 binding motif 2 |
| RASGRP1 | RAS guanyl releasing protein 1 (calcium and DAG-regulated) |
| RBM23 | RNA binding motif protein 23 |
| RDX | radixin |
| RFX7 | regulatory factor X, 7 |
| RIPPLY3 | ripply transcriptional repressor 3 |
| SCAF8 | SR-related CTD-associated factor 8 |
| SEMA4C | sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C |
| SETD1B | SET domain containing 1B |
| SMAD7 | SMAD family member 7 |
| SMYD5 | SMYD family member 5 |
| SNHG20 | small nucleolar RNA host gene 20 |
| SREK1 | splicing regulatory glutamine/lysine-rich protein 1 |
| STC2 | stanniocalcin 2 |
| SUV39H1 | suppressor of variegation 3-9 homolog 1 (Drosophila) |
| TBL1XR1 | transducin (beta)-like 1 X-linked receptor 1 |
| TGFB3 | transforming growth factor, beta 3 |
| TGIF1 | TGFB-induced factor homeobox 1 |
| TMEM30B | transmembrane protein 30B |
| TRIB1 | tribbles pseudokinase 1 |
| TRIB3 | tribbles pseudokinase 3 |
| TRIM16 | tripartite motif containing 16 |
| TRMT2A | tRNA methyltransferase 2 homolog A (S. cerevisiae) |
| TRPS1 | trichorhinophalangeal syndrome I |
| TSKU | tsukushi, small leucine rich proteoglycan |
| XBP1 | X-box binding protein 1 |
| XPO1 | exportin 1 |
| ZBED1 | zinc finger, BED-type containing 1 |
| ZC3H4 | zinc finger CCCH-type containing 4 |
| ZHX2 | zinc fingers and homeoboxes 2 |
| ZIC1 | Zic family member 1 |
| ZMIZ1 | zinc finger, MIZ-type containing 1 |
| ZNF573 | zinc finger protein 573 |
| ZNF692 | zinc finger protein 692 |
