| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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200 genes differentially expressed following the trichostatin A-7555 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| ABCB9 | ATP-binding cassette, sub-family B (MDR/TAP), member 9 |
| ADRB2 | adrenoceptor beta 2, surface |
| ANGPTL4 | angiopoietin-like 4 |
| AQP3 | aquaporin 3 (Gill blood group) |
| ARG2 | arginase 2 |
| ARNTL | aryl hydrocarbon receptor nuclear translocator-like |
| ASMTL | acetylserotonin O-methyltransferase-like |
| ATP7A | ATPase, Cu++ transporting, alpha polypeptide |
| AVPI1 | arginine vasopressin-induced 1 |
| BAIAP2 | BAI1-associated protein 2 |
| BAMBI | BMP and activin membrane-bound inhibitor |
| C8ORF60 | chromosome 8 open reading frame 60 |
| CCNA1 | cyclin A1 |
| CDC42EP3 | CDC42 effector protein (Rho GTPase binding) 3 |
| CDKN1A | cyclin-dependent kinase inhibitor 1A (p21, Cip1) |
| CHCHD7 | coiled-coil-helix-coiled-coil-helix domain containing 7 |
| CITED2 | Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 |
| CLU | clusterin |
| CORO1A | coronin, actin binding protein, 1A |
| CPM | carboxypeptidase M |
| CRISPLD2 | cysteine-rich secretory protein LCCL domain containing 2 |
| CTGF | connective tissue growth factor |
| CTH | cystathionine gamma-lyase |
| CYR61 | cysteine-rich, angiogenic inducer, 61 |
| DDIT4 | DNA-damage-inducible transcript 4 |
| DENND3 | DENN/MADD domain containing 3 |
| DNAJB1 | DnaJ (Hsp40) homolog, subfamily B, member 1 |
| DNMT3B | DNA (cytosine-5-)-methyltransferase 3 beta |
| DUSP1 | dual specificity phosphatase 1 |
| DUSP10 | dual specificity phosphatase 10 |
| DYRK3 | dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3 |
| ENPP1 | ectonucleotide pyrophosphatase/phosphodiesterase 1 |
| EPPK1 | epiplakin 1 |
| FABP4 | fatty acid binding protein 4, adipocyte |
| FAM69A | family with sequence similarity 69, member A |
| GADD45B | growth arrest and DNA-damage-inducible, beta |
| GEM | GTP binding protein overexpressed in skeletal muscle |
| GLRX | glutaredoxin (thioltransferase) |
| GLS | glutaminase |
| GMCL1 | germ cell-less, spermatogenesis associated 1 |
| GPRC5A | G protein-coupled receptor, class C, group 5, member A |
| GTF2B | general transcription factor IIB |
| GUCY1B3 | guanylate cyclase 1, soluble, beta 3 |
| H1FX | H1 histone family, member X |
| HBEGF | heparin-binding EGF-like growth factor |
| HIST1H2BG | histone cluster 1, H2bg |
| HOXA1 | homeobox A1 |
| HSPA2 | heat shock 70kDa protein 2 |
| IL11 | interleukin 11 |
| INSIG1 | insulin induced gene 1 |
| JUNB | jun B proto-oncogene |
| KCNJ2 | potassium channel, inwardly rectifying subfamily J, member 2 |
| KIF5C | kinesin family member 5C |
| LIMA1 | LIM domain and actin binding 1 |
| LMCD1 | LIM and cysteine-rich domains 1 |
| MAPKAPK2 | mitogen-activated protein kinase-activated protein kinase 2 |
| MAST3 | microtubule associated serine/threonine kinase 3 |
| MBNL2 | muscleblind-like splicing regulator 2 |
| MLF1 | myeloid leukemia factor 1 |
| MMP1 | matrix metallopeptidase 1 |
| MOSPD2 | motile sperm domain containing 2 |
| MPP1 | membrane protein, palmitoylated 1, 55kDa |
| NEAT1 | nuclear paraspeckle assembly transcript 1 (non-protein coding) |
| NEDD9 | neural precursor cell expressed, developmentally down-regulated 9 |
| NEU1 | sialidase 1 (lysosomal sialidase) |
| NMT2 | N-myristoyltransferase 2 |
| NPC1 | Niemann-Pick disease, type C1 |
| OASL | 2'-5'-oligoadenylate synthetase-like |
| PHKG2 | phosphorylase kinase, gamma 2 (testis) |
| PI4K2A | phosphatidylinositol 4-kinase type 2 alpha |
| RAB11FIP1 | RAB11 family interacting protein 1 (class I) |
| RAB8B | RAB8B, member RAS oncogene family |
| RAI2 | retinoic acid induced 2 |
| RGL1 | ral guanine nucleotide dissociation stimulator-like 1 |
| RGS4 | regulator of G-protein signaling 4 |
| RHOB | ras homolog family member B |
| RSRP1 | arginine/serine-rich protein 1 |
| RTN2 | reticulon 2 |
| SAT1 | spermidine/spermine N1-acetyltransferase 1 |
| SERPINE1 | serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 |
| SERPINI1 | serpin peptidase inhibitor, clade I (neuroserpin), member 1 |
| SH3GL3 | SH3-domain GRB2-like 3 |
| SLC30A1 | solute carrier family 30 (zinc transporter), member 1 |
| SREBF1 | sterol regulatory element binding transcription factor 1 |
| ST3GAL5 | ST3 beta-galactoside alpha-2,3-sialyltransferase 5 |
| STC1 | stanniocalcin 1 |
| STOM | stomatin |
| STX5 | syntaxin 5 |
| SYT1 | synaptotagmin I |
| SYT11 | synaptotagmin XI |
| SYTL2 | synaptotagmin-like 2 |
| TAOK3 | TAO kinase 3 |
| TBPL1 | TBP-like 1 |
| TJP3 | tight junction protein 3 |
| TMEM47 | transmembrane protein 47 |
| TNFRSF10B | tumor necrosis factor receptor superfamily, member 10b |
| TUBB2B | tubulin, beta 2B class IIb |
| TUFT1 | tuftelin 1 |
| ZFP36 | ZFP36 ring finger protein |
| ZNF324 | zinc finger protein 324 |
| Symbol | Name |
|---|---|
| ADNP | activity-dependent neuroprotector homeobox |
| AKAP8 | A kinase (PRKA) anchor protein 8 |
| AP5S1 | adaptor-related protein complex 5, sigma 1 subunit |
| ARMC6 | armadillo repeat containing 6 |
| ARSJ | arylsulfatase family, member J |
| BCAR3 | breast cancer anti-estrogen resistance 3 |
| BHLHE41 | basic helix-loop-helix family, member e41 |
| CASD1 | CAS1 domain containing 1 |
| CLCN6 | chloride channel, voltage-sensitive 6 |
| COG7 | component of oligomeric golgi complex 7 |
| COIL | coilin |
| CTDSP1 | CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 |
| CUL1 | cullin 1 |
| DDX31 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 |
| DENND4B | DENN/MADD domain containing 4B |
| DFFB | DNA fragmentation factor, 40kDa, beta polypeptide (caspase-activated DNase) |
| DHX35 | DEAH (Asp-Glu-Ala-His) box polypeptide 35 |
| FAM57A | family with sequence similarity 57, member A |
| FBXL15 | F-box and leucine-rich repeat protein 15 |
| FJX1 | four jointed box 1 (Drosophila) |
| FOSL1 | FOS-like antigen 1 |
| FOXA1 | forkhead box A1 |
| FST | follistatin |
| GRPR | gastrin-releasing peptide receptor |
| GTF2IRD1 | GTF2I repeat domain containing 1 |
| GUCY1A3 | guanylate cyclase 1, soluble, alpha 3 |
| H2AFY2 | H2A histone family, member Y2 |
| HAS2 | hyaluronan synthase 2 |
| HMGA2 | high mobility group AT-hook 2 |
| HOXA10 | homeobox A10 |
| INHBB | inhibin, beta B |
| INPP5E | inositol polyphosphate-5-phosphatase, 72 kDa |
| ITPKB | inositol-trisphosphate 3-kinase B |
| KCNN4 | potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 4 |
| KEAP1 | kelch-like ECH-associated protein 1 |
| LIF | leukemia inhibitory factor |
| LMNB1 | lamin B1 |
| LPAR1 | lysophosphatidic acid receptor 1 |
| MAGEA6 | melanoma antigen family A6 |
| MED24 | mediator complex subunit 24 |
| MEPCE | methylphosphate capping enzyme |
| METTL21B | methyltransferase like 21B |
| METTL4 | methyltransferase like 4 |
| MID1IP1 | MID1 interacting protein 1 |
| MSL2 | male-specific lethal 2 homolog (Drosophila) |
| MTPAP | mitochondrial poly(A) polymerase |
| MYD88 | myeloid differentiation primary response 88 |
| NARFL | nuclear prelamin A recognition factor-like |
| NFKB1 | nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 |
| NFKBIA | nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha |
| NLRX1 | NLR family member X1 |
| NME6 | NME/NM23 nucleoside diphosphate kinase 6 |
| NRIP1 | nuclear receptor interacting protein 1 |
| NUBP1 | nucleotide binding protein 1 |
| OARD1 | O-acyl-ADP-ribose deacylase 1 |
| PAGR1 | PAXIP1 associated glutamate-rich protein 1 |
| PEF1 | penta-EF-hand domain containing 1 |
| PLAU | plasminogen activator, urokinase |
| PPAP2B | phosphatidic acid phosphatase type 2B |
| PRKX | protein kinase, X-linked |
| PSMD7 | proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 |
| PTGFR | prostaglandin F receptor (FP) |
| PTPN9 | protein tyrosine phosphatase, non-receptor type 9 |
| RBM4B | RNA binding motif protein 4B |
| RHPN1-AS1 | RHPN1 antisense RNA 1 (head to head) |
| RIN2 | Ras and Rab interactor 2 |
| RNF220 | ring finger protein 220 |
| RPRD2 | regulation of nuclear pre-mRNA domain containing 2 |
| SCO2 | SCO2 cytochrome c oxidase assembly protein |
| SERPINH1 | serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1) |
| SETD1B | SET domain containing 1B |
| SFMBT1 | Scm-like with four mbt domains 1 |
| SH3TC2 | SH3 domain and tetratricopeptide repeats 2 |
| SLC35F2 | solute carrier family 35, member F2 |
| SMAGP | small cell adhesion glycoprotein |
| SMARCAL1 | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 |
| SMYD5 | SMYD family member 5 |
| SNRNP40 | small nuclear ribonucleoprotein 40kDa (U5) |
| SNUPN | snurportin 1 |
| SNX15 | sorting nexin 15 |
| SRSF4 | serine/arginine-rich splicing factor 4 |
| TGFB1I1 | transforming growth factor beta 1 induced transcript 1 |
| TRIB3 | tribbles pseudokinase 3 |
| TRIM13 | tripartite motif containing 13 |
| TRIM8 | tripartite motif containing 8 |
| TSSC4 | tumor suppressing subtransferable candidate 4 |
| TUBGCP5 | tubulin, gamma complex associated protein 5 |
| UBL4A | ubiquitin-like 4A |
| UBTF | upstream binding transcription factor, RNA polymerase I |
| USP21 | ubiquitin specific peptidase 21 |
| VEGFC | vascular endothelial growth factor C |
| WBSCR16 | Williams-Beuren syndrome chromosome region 16 |
| ZC3H4 | zinc finger CCCH-type containing 4 |
| ZMYM3 | zinc finger, MYM-type 3 |
| ZNF16 | zinc finger protein 16 |
| ZNF232 | zinc finger protein 232 |
| ZNF32 | zinc finger protein 32 |
| ZNF33B | zinc finger protein 33B |
| ZNF692 | zinc finger protein 692 |
| ZZZ3 | zinc finger, ZZ-type containing 3 |
