| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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198 genes differentially expressed following the trichostatin A-873 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| ACSBG1 | acyl-CoA synthetase bubblegum family member 1 |
| AHNAK2 | AHNAK nucleoprotein 2 |
| AKAP12 | A kinase (PRKA) anchor protein 12 |
| ALDOC | aldolase C, fructose-bisphosphate |
| ARMCX2 | armadillo repeat containing, X-linked 2 |
| BAIAP2 | BAI1-associated protein 2 |
| BAIAP3 | BAI1-associated protein 3 |
| CALCOCO1 | calcium binding and coiled-coil domain 1 |
| CCDC28A | coiled-coil domain containing 28A |
| CDKN1C | cyclin-dependent kinase inhibitor 1C (p57, Kip2) |
| CDKN2D | cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) |
| CLGN | calmegin |
| CORO1A | coronin, actin binding protein, 1A |
| CRISPLD2 | cysteine-rich secretory protein LCCL domain containing 2 |
| CSRP2 | cysteine and glycine-rich protein 2 |
| CXADR | coxsackie virus and adenovirus receptor |
| CYLD | cylindromatosis (turban tumor syndrome) |
| CYP1A1 | cytochrome P450, family 1, subfamily A, polypeptide 1 |
| CYP46A1 | cytochrome P450, family 46, subfamily A, polypeptide 1 |
| CYP4F2 | cytochrome P450, family 4, subfamily F, polypeptide 2 |
| DHRS2 | dehydrogenase/reductase (SDR family) member 2 |
| DLX2 | distal-less homeobox 2 |
| DNAJB4 | DnaJ (Hsp40) homolog, subfamily B, member 4 |
| DNAJC12 | DnaJ (Hsp40) homolog, subfamily C, member 12 |
| DNAJC6 | DnaJ (Hsp40) homolog, subfamily C, member 6 |
| DPYSL4 | dihydropyrimidinase-like 4 |
| EAF2 | ELL associated factor 2 |
| EFNA3 | ephrin-A3 |
| EPOR | erythropoietin receptor |
| FANCE | Fanconi anemia, complementation group E |
| FKBP1B | FK506 binding protein 1B, 12.6 kDa |
| FOS | FBJ murine osteosarcoma viral oncogene homolog |
| FSCN1 | fascin actin-bundling protein 1 |
| GEM | GTP binding protein overexpressed in skeletal muscle |
| GFPT2 | glutamine-fructose-6-phosphate transaminase 2 |
| GLRX | glutaredoxin (thioltransferase) |
| GLS | glutaminase |
| GRK5 | G protein-coupled receptor kinase 5 |
| GTF2B | general transcription factor IIB |
| HBEGF | heparin-binding EGF-like growth factor |
| HEY1 | hes-related family bHLH transcription factor with YRPW motif 1 |
| HOXA1 | homeobox A1 |
| HSPA2 | heat shock 70kDa protein 2 |
| ITM2C | integral membrane protein 2C |
| ITPR1 | inositol 1,4,5-trisphosphate receptor, type 1 |
| KIAA0355 | KIAA0355 |
| KIAA0513 | KIAA0513 |
| KIF13B | kinesin family member 13B |
| KIF21B | kinesin family member 21B |
| LIMA1 | LIM domain and actin binding 1 |
| LINC00341 | long intergenic non-protein coding RNA 341 |
| MAP1A | microtubule-associated protein 1A |
| MAP1B | microtubule-associated protein 1B |
| MAPRE2 | microtubule-associated protein, RP/EB family, member 2 |
| NEDD9 | neural precursor cell expressed, developmentally down-regulated 9 |
| NPC1 | Niemann-Pick disease, type C1 |
| PADI3 | peptidyl arginine deiminase, type III |
| PCDH9 | protocadherin 9 |
| PDE4DIP | phosphodiesterase 4D interacting protein |
| PER1 | period circadian clock 1 |
| PIK3CD | phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit delta |
| PRPH | peripherin |
| PTRF | polymerase I and transcript release factor |
| RGL1 | ral guanine nucleotide dissociation stimulator-like 1 |
| RGS2 | regulator of G-protein signaling 2 |
| RIPK4 | receptor-interacting serine-threonine kinase 4 |
| RND1 | Rho family GTPase 1 |
| RPL3L | ribosomal protein L3-like |
| RPS6KA5 | ribosomal protein S6 kinase, 90kDa, polypeptide 5 |
| RTN2 | reticulon 2 |
| RUNDC3B | RUN domain containing 3B |
| SAT1 | spermidine/spermine N1-acetyltransferase 1 |
| SEPP1 | selenoprotein P, plasma, 1 |
| SERPINB9 | serpin peptidase inhibitor, clade B (ovalbumin), member 9 |
| SERPINI1 | serpin peptidase inhibitor, clade I (neuroserpin), member 1 |
| SH3GL3 | SH3-domain GRB2-like 3 |
| SLC17A7 | solute carrier family 17 (vesicular glutamate transporter), member 7 |
| SLC30A3 | solute carrier family 30 (zinc transporter), member 3 |
| SNAI2 | snail family zinc finger 2 |
| ST3GAL5 | ST3 beta-galactoside alpha-2,3-sialyltransferase 5 |
| STARD5 | StAR-related lipid transfer (START) domain containing 5 |
| STK17A | serine/threonine kinase 17a |
| STON1 | stonin 1 |
| SYBU | syntabulin (syntaxin-interacting) |
| TBXA2R | thromboxane A2 receptor |
| THEMIS2 | thymocyte selection associated family member 2 |
| TIPARP | TCDD-inducible poly(ADP-ribose) polymerase |
| TNFAIP3 | tumor necrosis factor, alpha-induced protein 3 |
| TNFSF9 | tumor necrosis factor (ligand) superfamily, member 9 |
| TUFT1 | tuftelin 1 |
| TXNIP | thioredoxin interacting protein |
| ULBP2 | UL16 binding protein 2 |
| WDR19 | WD repeat domain 19 |
| WDR47 | WD repeat domain 47 |
| WIPI1 | WD repeat domain, phosphoinositide interacting 1 |
| ZBTB18 | zinc finger and BTB domain containing 18 |
| ZCCHC24 | zinc finger, CCHC domain containing 24 |
| ZDHHC11 | zinc finger, DHHC-type containing 11 |
| ZNF204P | zinc finger protein 204, pseudogene |
| Symbol | Name |
|---|---|
| ACKR3 | atypical chemokine receptor 3 |
| ADNP | activity-dependent neuroprotector homeobox |
| AMIGO2 | adhesion molecule with Ig-like domain 2 |
| AMOTL2 | angiomotin like 2 |
| AP5S1 | adaptor-related protein complex 5, sigma 1 subunit |
| ARHGEF5 | Rho guanine nucleotide exchange factor (GEF) 5 |
| ARMCX5 | armadillo repeat containing, X-linked 5 |
| ASPSCR1 | alveolar soft part sarcoma chromosome region, candidate 1 |
| ASTE1 | asteroid homolog 1 (Drosophila) |
| BANP | BTG3 associated nuclear protein |
| BCAR3 | breast cancer anti-estrogen resistance 3 |
| BRD1 | bromodomain containing 1 |
| BRINP3 | bone morphogenetic protein/retinoic acid inducible neural-specific 3 |
| C1ORF216 | chromosome 1 open reading frame 216 |
| C7ORF49 | chromosome 7 open reading frame 49 |
| C9ORF40 | chromosome 9 open reading frame 40 |
| C9ORF91 | chromosome 9 open reading frame 91 |
| CASD1 | CAS1 domain containing 1 |
| CBFA2T3 | core-binding factor, runt domain, alpha subunit 2; translocated to, 3 |
| CHST15 | carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15 |
| CLK1 | CDC-like kinase 1 |
| COIL | coilin |
| CTCF | CCCTC-binding factor (zinc finger protein) |
| CTDSP1 | CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 |
| CUL1 | cullin 1 |
| CYP26A1 | cytochrome P450, family 26, subfamily A, polypeptide 1 |
| DKK1 | dickkopf WNT signaling pathway inhibitor 1 |
| DUSP4 | dual specificity phosphatase 4 |
| EFNA1 | ephrin-A1 |
| EGR3 | early growth response 3 |
| ESRP2 | epithelial splicing regulatory protein 2 |
| FAM57A | family with sequence similarity 57, member A |
| FJX1 | four jointed box 1 (Drosophila) |
| FOXA1 | forkhead box A1 |
| FOXC1 | forkhead box C1 |
| FOXD1 | forkhead box D1 |
| GABPA | GA binding protein transcription factor, alpha subunit 60kDa |
| GABPB1 | GA binding protein transcription factor, beta subunit 1 |
| GATA3 | GATA binding protein 3 |
| GMEB2 | glucocorticoid modulatory element binding protein 2 |
| GTF2IRD1 | GTF2I repeat domain containing 1 |
| HOXC11 | homeobox C11 |
| IFNGR2 | interferon gamma receptor 2 (interferon gamma transducer 1) |
| INHBB | inhibin, beta B |
| IRS1 | insulin receptor substrate 1 |
| IRX5 | iroquois homeobox 5 |
| JADE1 | jade family PHD finger 1 |
| KEAP1 | kelch-like ECH-associated protein 1 |
| KIAA0753 | KIAA0753 |
| LHFPL2 | lipoma HMGIC fusion partner-like 2 |
| LRP8 | low density lipoprotein receptor-related protein 8, apolipoprotein e receptor |
| MEPCE | methylphosphate capping enzyme |
| MSL1 | male-specific lethal 1 homolog (Drosophila) |
| MYC | v-myc avian myelocytomatosis viral oncogene homolog |
| NFKB1 | nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 |
| NPY1R | neuropeptide Y receptor Y1 |
| NR2F2 | nuclear receptor subfamily 2, group F, member 2 |
| NRIP1 | nuclear receptor interacting protein 1 |
| NUAK1 | NUAK family, SNF1-like kinase, 1 |
| PAPD7 | PAP associated domain containing 7 |
| PHIP | pleckstrin homology domain interacting protein |
| POGK | pogo transposable element with KRAB domain |
| PPP1R8 | protein phosphatase 1, regulatory subunit 8 |
| PPRC1 | peroxisome proliferator-activated receptor gamma, coactivator-related 1 |
| PRNP | prion protein |
| PRR15L | proline rich 15-like |
| PTBP2 | polypyrimidine tract binding protein 2 |
| RASGRP1 | RAS guanyl releasing protein 1 (calcium and DAG-regulated) |
| RBM23 | RNA binding motif protein 23 |
| REV1 | REV1, polymerase (DNA directed) |
| RHOBTB1 | Rho-related BTB domain containing 1 |
| SCAF8 | SR-related CTD-associated factor 8 |
| SEMA4C | sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C |
| SETD1B | SET domain containing 1B |
| SFMBT1 | Scm-like with four mbt domains 1 |
| SMAD7 | SMAD family member 7 |
| SMEK2 | SMEK homolog 2, suppressor of mek1 (Dictyostelium) |
| SMG9 | SMG9 nonsense mediated mRNA decay factor |
| SPIN1 | spindlin 1 |
| SREK1 | splicing regulatory glutamine/lysine-rich protein 1 |
| SRSF4 | serine/arginine-rich splicing factor 4 |
| STBD1 | starch binding domain 1 |
| STC2 | stanniocalcin 2 |
| TMEM30B | transmembrane protein 30B |
| TOE1 | target of EGR1, member 1 (nuclear) |
| TRAF5 | TNF receptor-associated factor 5 |
| TRIB1 | tribbles pseudokinase 1 |
| TRIB3 | tribbles pseudokinase 3 |
| TRIM16 | tripartite motif containing 16 |
| TRPS1 | trichorhinophalangeal syndrome I |
| TSKU | tsukushi, small leucine rich proteoglycan |
| XBP1 | X-box binding protein 1 |
| ZC3H4 | zinc finger CCCH-type containing 4 |
| ZHX2 | zinc fingers and homeoboxes 2 |
| ZIC1 | Zic family member 1 |
| ZNF239 | zinc finger protein 239 |
| ZNF254 | zinc finger protein 254 |
| ZNF33B | zinc finger protein 33B |
| ZNF692 | zinc finger protein 692 |
