tubulobulbar complex Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description Actin-based structures involved in establishing close contact between Sertoli-Sertoli cells or Sertoli-spermatids in the seminiferous tubules of the testes. (Gene Ontology, GO_0036284)
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Genes

133 proteins co-occuring with the tubulobulbar complex cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
CDC16 cell division cycle 16 2.50906
USP6 ubiquitin specific peptidase 6 1.89108
TBC1D10A TBC1 domain family, member 10A 1.80239
TBC1D15 TBC1 domain family, member 15 1.66962
TBC1D2 TBC1 domain family, member 2 1.50453
GRTP1 growth hormone regulated TBC protein 1 1.50453
TBC1D1 TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 1.47231
TBC1D3F TBC1 domain family, member 3F 1.40186
TBC1D3 TBC1 domain family, member 3 1.40186
TBC1D10B TBC1 domain family, member 10B 1.33902
SGSM1 small G protein signaling modulator 1 1.30551
TBC1D13 TBC1 domain family, member 13 1.29639
TBC1D4 TBC1 domain family, member 4 1.29371
EVI5 ecotropic viral integration site 5 1.25601
PVRL2 poliovirus receptor-related 2 (herpesvirus entry mediator B) 1.22257
EVI5L ecotropic viral integration site 5-like 1.1429
TBC1D7 TBC1 domain family, member 7 1.07308
TBC1D9B TBC1 domain family, member 9B (with GRAM domain) 1.05589
TBC1D20 TBC1 domain family, member 20 1.04733
RAB35 RAB35, member RAS oncogene family 0.983906
ARF6 ADP-ribosylation factor 6 0.934544
SGSM2 small G protein signaling modulator 2 0.904138
TBC1D10C TBC1 domain family, member 10C 0.874107
TBC1D32 TBC1 domain family, member 32 0.86169
TBC1D14 TBC1 domain family, member 14 0.858014
TBC1D17 TBC1 domain family, member 17 0.832761
TBCA tubulin folding cofactor A 0.827712
LMO7 LIM domain 7 0.824041
PVRL3 poliovirus receptor-related 3 0.760887
RUNDC3A RUN domain containing 3A 0.759069
PITPNM1 phosphatidylinositol transfer protein, membrane-associated 1 0.758161
SP9 Sp9 transcription factor 0.752716
TBC1D24 TBC1 domain family, member 24 0.739614
EDNRA endothelin receptor type A 0.731524
TYR tyrosinase 0.721688
TBC1D26 TBC1 domain family, member 26 0.714126
UCHL3 ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) 0.713238
RAB10 RAB10, member RAS oncogene family 0.70439
RABGAP1 RAB GTPase activating protein 1 0.703067
TBC1D5 TBC1 domain family, member 5 0.689451
NCDN neurochondrin 0.685517
RAB36 RAB36, member RAS oncogene family 0.68508
DPEP1 dipeptidase 1 (renal) 0.682027
RAB9A RAB9A, member RAS oncogene family 0.642715
SERPINA7 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7 0.639717
TBCC tubulin folding cofactor C 0.621379
RAB1A RAB1A, member RAS oncogene family 0.612471
SGSM3 small G protein signaling modulator 3 0.601066
RAB8A RAB8A, member RAS oncogene family 0.601066
RAB13 RAB13, member RAS oncogene family 0.585523
TAAR1 trace amine associated receptor 1 0.577581
ERBB2IP erbb2 interacting protein 0.577164
RAB5A RAB5A, member RAS oncogene family 0.574662
AMIGO2 adhesion molecule with Ig-like domain 2 0.57008
ETNK1 ethanolamine kinase 1 0.567585
RAB27A RAB27A, member RAS oncogene family 0.562187
RAB11A RAB11A, member RAS oncogene family 0.555559
IL5 interleukin 5 0.548535
EPS8 epidermal growth factor receptor pathway substrate 8 0.542764
JAM2 junctional adhesion molecule 2 0.538238
CLDN11 claudin 11 0.486096
GREM1 gremlin 1, DAN family BMP antagonist 0.484079
TBCB tubulin folding cofactor B 0.482467
CTTN cortactin 0.461599
SLC9A3R1 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 1 0.461199
RAB2A RAB2A, member RAS oncogene family 0.4608
ACAP1 ArfGAP with coiled-coil, ankyrin repeat and PH domains 1 0.458404
MS4A2 membrane-spanning 4-domains, subfamily A, member 2 0.458404
TBCD tubulin folding cofactor D 0.456809
DNM3 dynamin 3 0.441708
RAB22A RAB22A, member RAS oncogene family 0.419644
ACTR3 ARP3 actin-related protein 3 homolog (yeast) 0.416902
ARHGAP17 Rho GTPase activating protein 17 0.407529
RAB23 RAB23, member RAS oncogene family 0.393549
RD3 retinal degeneration 3 0.387365
SHD Src homology 2 domain containing transforming protein D 0.377738
MLLT4 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 0.37697
DUOXA1 dual oxidase maturation factor 1 0.369301
RAB4A RAB4A, member RAS oncogene family 0.363185
NOB1 NIN1/RPN12 binding protein 1 homolog (S. cerevisiae) 0.362804
RAB11B RAB11B, member RAS oncogene family 0.360896
MTMR2 myotubularin related protein 2 0.350243
RASA1 RAS p21 protein activator (GTPase activating protein) 1 0.348346
CHM choroideremia (Rab escort protein 1) 0.347587
PSTPIP1 proline-serine-threonine phosphatase interacting protein 1 0.339261
RAB34 RAB34, member RAS oncogene family 0.334356
EDNRB endothelin receptor type B 0.334356
CDK20 cyclin-dependent kinase 20 0.333979
PHF20 PHD finger protein 20 0.332095
ARL2 ADP-ribosylation factor-like 2 0.329461
EEA1 early endosome antigen 1 0.326453
IL2 interleukin 2 0.326078
MAPRE2 microtubule-associated protein, RP/EB family, member 2 0.315212
JAM3 junctional adhesion molecule 3 0.302912
RAB43 RAB43, member RAS oncogene family 0.300311
BTNL2 butyrophilin-like 2 0.295119
TFCP2 transcription factor CP2 0.287352
RAB6A RAB6A, member RAS oncogene family 0.282926
PVRL1 poliovirus receptor-related 1 (herpesvirus entry mediator C) 0.279612
TBP TATA box binding protein 0.278509
GGA3 golgi-associated, gamma adaptin ear containing, ARF binding protein 3 0.273734
TBCE tubulin folding cofactor E 0.265311
ITGA4 integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor) 0.260202
TRH thyrotropin-releasing hormone 0.259473
SFTPA1 surfactant protein A1 0.259473
MARVELD2 MARVEL domain containing 2 0.254017
VPS29 vacuolar protein sorting 29 homolog (S. cerevisiae) 0.251114
ATP6AP1 ATPase, H+ transporting, lysosomal accessory protein 1 0.238837
CNTLN centlein, centrosomal protein 0.238478
CDKN2A cyclin-dependent kinase inhibitor 2A 0.233101
IL23A interleukin 23, alpha subunit p19 0.227397
PHGDH phosphoglycerate dehydrogenase 0.225267
RAB40AL RAB40A, member RAS oncogene family-like 0.22279
CEP290 centrosomal protein 290kDa 0.220673
CD4 CD4 molecule 0.219265
RAB27B RAB27B, member RAS oncogene family 0.218212
ACTR2 ARP2 actin-related protein 2 homolog (yeast) 0.21646
SCX scleraxis basic helix-loop-helix transcription factor 0.212627
RAB3A RAB3A, member RAS oncogene family 0.212627
RUNX1T1 runt-related transcription factor 1; translocated to, 1 (cyclin D-related) 0.212627
E2F1 E2F transcription factor 1 0.21228
GPR176 G protein-coupled receptor 176 0.207108
CLTC clathrin, heavy chain (Hc) 0.203022
TUB tubby bipartite transcription factor 0.199659
ABCB6 ATP-binding cassette, sub-family B (MDR/TAP), member 6 (Langereis blood group) 0.195353
DAND5 DAN domain family member 5, BMP antagonist 0.194371
MADCAM1 mucosal vascular addressin cell adhesion molecule 1 0.188274
CHIT1 chitinase 1 (chitotriosidase) 0.187646
CCNA2 cyclin A2 0.180045
WASL Wiskott-Aldrich syndrome-like 0.178011
SLC9A3R2 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 2 0.170114
ALB albumin 0.168349
UBC ubiquitin C 0.158129