u1 snrnp Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A ribonucleoprotein complex that contains small nuclear RNA U1. (Gene Ontology, GO_0005685)
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Genes

126 proteins co-occuring with the u1 snrnp cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
SNRNP70 small nuclear ribonucleoprotein 70kDa (U1) 2.61463
SNRPA small nuclear ribonucleoprotein polypeptide A 2.4674
U2AF2 U2 small nuclear RNA auxiliary factor 2 1.72933
SRSF1 serine/arginine-rich splicing factor 1 1.43218
DDX23 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 1.38738
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 1.34719
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 1.30604
RBM25 RNA binding motif protein 25 1.28783
SNRPC small nuclear ribonucleoprotein polypeptide C 1.2518
SRSF2 serine/arginine-rich splicing factor 2 1.19211
TIA1 TIA1 cytotoxic granule-associated RNA binding protein 1.17158
TRAV38-2DV8 T cell receptor alpha variable 38-2/delta variable 8 1.0812
HFM1 HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae) 1.0812
LUC7L3 LUC7-like 3 (S. cerevisiae) 1.066
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 1.04431
RRM1 ribonucleotide reductase M1 1.00991
FASTK Fas-activated serine/threonine kinase 0.998086
SRSF10 serine/arginine-rich splicing factor 10 0.968401
SRSF5 serine/arginine-rich splicing factor 5 0.909716
RSRC1 arginine/serine-rich coiled-coil 1 0.902281
SF1 splicing factor 1 0.89672
LUC7L2 LUC7-like 2 (S. cerevisiae) 0.875028
SRSF4 serine/arginine-rich splicing factor 4 0.873647
PTBP1 polypyrimidine tract binding protein 1 0.870426
CPSF1 cleavage and polyadenylation specific factor 1, 160kDa 0.868586
RRM2 ribonucleotide reductase M2 0.839187
GIMAP7 GTPase, IMAP family member 7 0.833679
PNN pinin, desmosome associated protein 0.822206
TRA2B transformer 2 beta homolog (Drosophila) 0.803855
HMGA1 high mobility group AT-hook 1 0.798811
DDX47 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 0.784614
LUC7L LUC7-like (S. cerevisiae) 0.764072
RPL30 ribosomal protein L30 0.748641
TIAL1 TIA1 cytotoxic granule-associated RNA binding protein-like 1 0.729284
CHRNA1 cholinergic receptor, nicotinic, alpha 1 (muscle) 0.716346
CPSF3 cleavage and polyadenylation specific factor 3, 73kDa 0.709693
SFPQ splicing factor proline/glutamine-rich 0.685517
CLK1 CDC-like kinase 1 0.679849
HNRNPLL heterogeneous nuclear ribonucleoprotein L-like 0.679849
NCBP2 nuclear cap binding protein subunit 2, 20kDa 0.671593
PRPF8 pre-mRNA processing factor 8 0.664232
RNASEH2A ribonuclease H2, subunit A 0.656464
PSEN2 presenilin 2 0.647433
SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 16kDa 0.636723
RBM23 RNA binding motif protein 23 0.633732
DHX8 DEAH (Asp-Glu-Ala-His) box polypeptide 8 0.629892
LAMTOR2 late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 0.608241
HNRNPL heterogeneous nuclear ribonucleoprotein L 0.595593
CRNKL1 crooked neck pre-mRNA splicing factor 1 0.580504
HEBP2 heme binding protein 2 0.5568
PRPF40A PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) 0.553491
FGFR2 fibroblast growth factor receptor 2 0.535361
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5) 0.52675
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 0.505131
DDX19B DEAD (Asp-Glu-Ala-Asp) box polypeptide 19B 0.50107
SRRM2 serine/arginine repetitive matrix 2 0.498636
PRPF19 pre-mRNA processing factor 19 0.490135
SRPK2 SRSF protein kinase 2 0.486904
SNRPG small nuclear ribonucleoprotein polypeptide G 0.479245
PNISR PNN-interacting serine/arginine-rich protein 0.477636
CD2BP2 CD2 (cytoplasmic tail) binding protein 2 0.461998
HNRNPF heterogeneous nuclear ribonucleoprotein F 0.461599
MAGEA4 melanoma antigen family A4 0.454816
SNRPD2 small nuclear ribonucleoprotein D2 polypeptide 16.5kDa 0.453223
TROVE2 TROVE domain family, member 2 0.45004
KCNK6 potassium channel, two pore domain subfamily K, member 6 0.446465
CSTF3 cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa 0.433801
SKAP2 src kinase associated phosphoprotein 2 0.431829
RBFOX1 RNA binding protein, fox-1 homolog (C. elegans) 1 0.428678
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.418468
SRSF9 serine/arginine-rich splicing factor 9 0.414555
RPS20 ribosomal protein S20 0.413773
SRRM1 serine/arginine repetitive matrix 1 0.393936
SF3A1 splicing factor 3a, subunit 1, 120kDa 0.393936
RBM14 RNA binding motif protein 14 0.392775
CPSF6 cleavage and polyadenylation specific factor 6, 68kDa 0.392388
RBM4 RNA binding motif protein 4 0.383895
SLU7 SLU7 splicing factor homolog (S. cerevisiae) 0.378122
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.377738
CHRNE cholinergic receptor, nicotinic, epsilon (muscle) 0.367771
EFTUD2 elongation factor Tu GTP binding domain containing 2 0.363185
NF1 neurofibromin 1 0.354042
SMN1 survival of motor neuron 1, telomeric 0.351762
SP6 Sp6 transcription factor 0.351382
SF3A2 splicing factor 3a, subunit 2, 66kDa 0.345314
ACYP2 acylphosphatase 2, muscle type 0.338506
ACYP1 acylphosphatase 1, erythrocyte (common) type 0.337373
VEZF1 vascular endothelial zinc finger 1 0.335487
TOP1 topoisomerase (DNA) I 0.334356
MORF4 mortality factor 4 (pseudogene) 0.329461
IGHV3-30 immunoglobulin heavy variable 3-30 0.311851
GPR162 G protein-coupled receptor 162 0.308494
RPS13 ribosomal protein S13 0.307749
SRPK1 SRSF protein kinase 1 0.306632
RNPS1 RNA binding protein S1, serine-rich domain 0.305888
CENPB centromere protein B, 80kDa 0.294007
GLB1 galactosidase, beta 1 0.277774
TRIM21 tripartite motif containing 21 0.267871
SMN2 survival of motor neuron 2, centromeric 0.26312
FUS FUS RNA binding protein 0.262025
EWSR1 EWS RNA-binding protein 1 0.26166
CELF1 CUGBP, Elav-like family member 1 0.252927
GH2 growth hormone 2 0.250389
SSPN sarcospan 0.250026
ATM ATM serine/threonine kinase 0.24424
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.242437
GTF3A general transcription factor IIIA 0.238478
TCIRG1 T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3 0.233101
MSL2 male-specific lethal 2 homolog (Drosophila) 0.231672
PEX2 peroxisomal biogenesis factor 2 0.229888
TLR7 toll-like receptor 7 0.226686
DHRS2 dehydrogenase/reductase (SDR family) member 2 0.225976
PEX1 peroxisomal biogenesis factor 1 0.223497
IRF2 interferon regulatory factor 2 0.222436
KCNH2 potassium channel, voltage gated eag related subfamily H, member 2 0.221378
PCDH15 protocadherin-related 15 0.216111
FLI1 Fli-1 proto-oncogene, ETS transcription factor 0.209169
USP7 ubiquitin specific peptidase 7 (herpes virus-associated) 0.203022
TSHB thyroid stimulating hormone, beta 0.191777
RNF8 ring finger protein 8, E3 ubiquitin protein ligase 0.176024
RAB10 RAB10, member RAS oncogene family 0.17141
KRT15 keratin 15, type I 0.170114
RPL32 ribosomal protein L32 0.165
BIN1 bridging integrator 1 0.163865
LGALS3 lectin, galactoside-binding, soluble, 3 0.158882
CBS cystathionine-beta-synthase 0.157039