u5 snrnp Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A ribonucleoprotein complex that contains small nuclear RNA U5. (Gene Ontology, GO_0005682)
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Genes

68 proteins co-occuring with the u5 snrnp cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
PRPF8 pre-mRNA processing factor 8 2.18374
DDX23 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 2.00765
EFTUD2 elongation factor Tu GTP binding domain containing 2 1.98977
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5) 1.34665
PRPF18 pre-mRNA processing factor 18 1.34556
DHX8 DEAH (Asp-Glu-Ala-His) box polypeptide 8 1.32167
SLU7 SLU7 splicing factor homolog (S. cerevisiae) 1.27983
TFIP11 tuftelin interacting protein 11 1.19263
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 1.16081
CD2BP2 CD2 (cytoplasmic tail) binding protein 2 1.14955
PRPF6 pre-mRNA processing factor 6 1.12143
CDC40 cell division cycle 40 1.09543
DHX16 DEAH (Asp-Glu-Ala-His) box polypeptide 16 1.0564
SART3 squamous cell carcinoma antigen recognized by T cells 3 1.03779
PRPF4 pre-mRNA processing factor 4 1.01784
DDX19B DEAD (Asp-Glu-Ala-Asp) box polypeptide 19B 0.996613
RBM25 RNA binding motif protein 25 0.884244
EEF2 eukaryotic translation elongation factor 2 0.84791
MLXIP MLX interacting protein 0.835515
WTAP Wilms tumor 1 associated protein 0.819911
ZMYND11 zinc finger, MYND-type containing 11 0.818993
SKIV2L superkiller viralicidic activity 2-like (S. cerevisiae) 0.813946
CUX2 cut-like homeobox 2 0.791022
PRPF19 pre-mRNA processing factor 19 0.78004
SEC63 SEC63 homolog (S. cerevisiae) 0.774101
SRRM2 serine/arginine repetitive matrix 2 0.771819
HMX2 H6 family homeobox 2 0.752716
PRPF31 pre-mRNA processing factor 31 0.735565
PNISR PNN-interacting serine/arginine-rich protein 0.730628
TUBA1B tubulin, alpha 1b 0.720351
MSI1 musashi RNA-binding protein 1 0.714126
SRSF9 serine/arginine-rich splicing factor 9 0.660776
SART1 squamous cell carcinoma antigen recognized by T cells 0.659913
U2AF2 U2 small nuclear RNA auxiliary factor 2 0.655602
USP4 ubiquitin specific peptidase 4 (proto-oncogene) 0.641429
DDX47 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 0.636295
TUBA1C tubulin, alpha 1c 0.629039
HCAR2 hydroxycarboxylic acid receptor 2 0.610778
HNRNPF heterogeneous nuclear ribonucleoprotein F 0.596855
PRPF3 pre-mRNA processing factor 3 0.595173
SF3A2 splicing factor 3a, subunit 2, 66kDa 0.584268
NCOR2 nuclear receptor corepressor 2 0.565092
HNRNPM heterogeneous nuclear ribonucleoprotein M 0.563847
CLK1 CDC-like kinase 1 0.561358
CENPV centromere protein V 0.559285
LSM4 LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae) 0.518573
SNRNP70 small nuclear ribonucleoprotein 70kDa (U1) 0.502288
SNRNP40 small nuclear ribonucleoprotein 40kDa (U5) 0.490539
CDC5L cell division cycle 5-like 0.487711
TSN translin 0.484079
PNN pinin, desmosome associated protein 0.4676
UBD ubiquitin D 0.441312
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.438937
SKI SKI proto-oncogene 0.41143
PRPF4B pre-mRNA processing factor 4B 0.410649
SRSF2 serine/arginine-rich splicing factor 2 0.409869
DDX21 DEAD (Asp-Glu-Ala-Asp) box helicase 21 0.377738
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.3227
SKAP2 src kinase associated phosphoprotein 2 0.310358
TXNL4A thioredoxin-like 4A 0.308494
NTSR1 neurotensin receptor 1 (high affinity) 0.293267
HNRNPK heterogeneous nuclear ribonucleoprotein K 0.264946
COPS5 COP9 signalosome subunit 5 0.235966
DYNLL1 dynein, light chain, LC8-type 1 0.233101
JAG2 jagged 2 0.226331
PLIN2 perilipin 2 0.215063
BUB1 BUB1 mitotic checkpoint serine/threonine kinase 0.18093
TUBA1A tubulin, alpha 1a 0.175745