ultrastructure Gene Set

Dataset Phosphosite Textmining Biological Term Annotations
Category structural or functional annotations
Type biological term
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Genes

280 proteins co-occuring with the biological term ultrastructure in abstracts of publications describing phosphosites from the Phosphosite Textmining Biological Term Annotations dataset.

Symbol Name
AAK1 AP2 associated kinase 1
ABI1 abl-interactor 1
ACE angiotensin I converting enzyme
ACP1 acid phosphatase 1, soluble
ADD1 adducin 1 (alpha)
AKT1 v-akt murine thymoma viral oncogene homolog 1
ANXA1 annexin A1
AP2B1 adaptor-related protein complex 2, beta 1 subunit
AQP2 aquaporin 2 (collecting duct)
AQP9 aquaporin 9
ARHGEF2 Rho/Rac guanine nucleotide exchange factor (GEF) 2
ASGR2 asialoglycoprotein receptor 2
ATF2 activating transcription factor 2
ATM ATM serine/threonine kinase
ATXN1 ataxin 1
AURKA aurora kinase A
AURKB aurora kinase B
BAD BCL2-associated agonist of cell death
BAIAP2 BAI1-associated protein 2
BAX BCL2-associated X protein
BCL2 B-cell CLL/lymphoma 2
BRCA2 breast cancer 2, early onset
BRSK1 BR serine/threonine kinase 1
BUB3 BUB3 mitotic checkpoint protein
C6ORF25 chromosome 6 open reading frame 25
CACNA1B calcium channel, voltage-dependent, N type, alpha 1B subunit
CACNA1C calcium channel, voltage-dependent, L type, alpha 1C subunit
CALD1 caldesmon 1
CAMK2A calcium/calmodulin-dependent protein kinase II alpha
CAMK2B calcium/calmodulin-dependent protein kinase II beta
CAV1 caveolin 1, caveolae protein, 22kDa
CBX5 chromobox homolog 5
CCDC88A coiled-coil domain containing 88A
CD46 CD46 molecule, complement regulatory protein
CD79A CD79a molecule, immunoglobulin-associated alpha
CDC20 cell division cycle 20
CDC25B cell division cycle 25B
CDCA8 cell division cycle associated 8
CDK1 cyclin-dependent kinase 1
CDKN1B cyclin-dependent kinase inhibitor 1B (p27, Kip1)
CEP55 centrosomal protein 55kDa
CETN2 centrin, EF-hand protein, 2
CFL1 cofilin 1 (non-muscle)
CHAT choline O-acetyltransferase
CHEK1 checkpoint kinase 1
CHEK2 checkpoint kinase 2
CHGA chromogranin A
CLDN5 claudin 5
CLIP1 CAP-GLY domain containing linker protein 1
COIL coilin
COX4I1 cytochrome c oxidase subunit IV isoform 1
COX5A cytochrome c oxidase subunit Va
CPEB1 cytoplasmic polyadenylation element binding protein 1
CREB1 cAMP responsive element binding protein 1
CRK v-crk avian sarcoma virus CT10 oncogene homolog
CRMP1 collapsin response mediator protein 1
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa
DAB1 Dab, reelin signal transducer, homolog 1 (Drosophila)
DAG1 dystroglycan 1 (dystrophin-associated glycoprotein 1)
DAPK1 death-associated protein kinase 1
DBNL drebrin-like
DCC DCC netrin 1 receptor
DCTN1 dynactin 1
DCX doublecortin
DIAPH2 diaphanous-related formin 2
DLG1 discs, large homolog 1 (Drosophila)
DLG4 discs, large homolog 4 (Drosophila)
DNM1 dynamin 1
DNM1L dynamin 1-like
DOK1 docking protein 1, 62kDa (downstream of tyrosine kinase 1)
DRD3 dopamine receptor D3
DSTN destrin (actin depolymerizing factor)
DYNLT1 dynein, light chain, Tctex-type 1
EGFR epidermal growth factor receptor
EIF2S1 eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
EIF4E eukaryotic translation initiation factor 4E
EIF4EBP1 eukaryotic translation initiation factor 4E binding protein 1
ELAVL1 ELAV like RNA binding protein 1
ENAH enabled homolog (Drosophila)
EPHA3 EPH receptor A3
EPHA4 EPH receptor A4
EPHB2 EPH receptor B2
EPS15 epidermal growth factor receptor pathway substrate 15
ESPL1 extra spindle pole bodies homolog 1 (S. cerevisiae)
ESR2 estrogen receptor 2 (ER beta)
EZR ezrin
F11R F11 receptor
FECH ferrochelatase
FLNA filamin A, alpha
FLRT1 fibronectin leucine rich transmembrane protein 1
FSCB fibrous sheath CABYR binding protein
FSCN1 fascin actin-bundling protein 1
FYN FYN proto-oncogene, Src family tyrosine kinase
GABRB2 gamma-aminobutyric acid (GABA) A receptor, beta 2
GAP43 growth associated protein 43
GEM GTP binding protein overexpressed in skeletal muscle
GFAP glial fibrillary acidic protein
GIT1 G protein-coupled receptor kinase interacting ArfGAP 1
GJA1 gap junction protein, alpha 1, 43kDa
GJD2 gap junction protein, delta 2, 36kDa
GMFG glia maturation factor, gamma
GOLGA2 golgin A2
GORASP2 golgi reassembly stacking protein 2, 55kDa
GPHN gephyrin
GRIA1 glutamate receptor, ionotropic, AMPA 1
GRIA2 glutamate receptor, ionotropic, AMPA 2
GRIA4 glutamate receptor, ionotropic, AMPA 4
GRIN1 glutamate receptor, ionotropic, N-methyl D-aspartate 1
GRIN2A glutamate receptor, ionotropic, N-methyl D-aspartate 2A
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B
GSK3A glycogen synthase kinase 3 alpha
GSK3B glycogen synthase kinase 3 beta
H3F3A H3 histone, family 3A
HCK HCK proto-oncogene, Src family tyrosine kinase
HELB helicase (DNA) B
HIST1H1C histone cluster 1, H1c
HIST1H3A histone cluster 1, H3a
HSPB1 heat shock 27kDa protein 1
HSPB6 heat shock protein, alpha-crystallin-related, B6
IGF1R insulin-like growth factor 1 receptor
INCENP inner centromere protein antigens 135/155kDa
INPPL1 inositol polyphosphate phosphatase-like 1
IRS1 insulin receptor substrate 1
ITGA4 integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
ITGB2 integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)
ITGB4 integrin, beta 4
ITPKA inositol-trisphosphate 3-kinase A
JUN jun proto-oncogene
KALRN kalirin, RhoGEF kinase
KCNJ16 potassium channel, inwardly rectifying subfamily J, member 16
KIF23 kinesin family member 23
KIRREL kin of IRRE like (Drosophila)
KRAS Kirsten rat sarcoma viral oncogene homolog
KRT18 keratin 18, type I
KRT8 keratin 8, type II
L1CAM L1 cell adhesion molecule
LCK LCK proto-oncogene, Src family tyrosine kinase
LCP1 lymphocyte cytosolic protein 1 (L-plastin)
LIMK1 LIM domain kinase 1
LIMK2 LIM domain kinase 2
LY6G6F lymphocyte antigen 6 complex, locus G6F
M6PR mannose-6-phosphate receptor (cation dependent)
MAP1B microtubule-associated protein 1B
MAP2 microtubule-associated protein 2
MAP2K1 mitogen-activated protein kinase kinase 1
MAP2K6 mitogen-activated protein kinase kinase 6
MAP3K11 mitogen-activated protein kinase kinase kinase 11
MAP4 microtubule-associated protein 4
MAPK1 mitogen-activated protein kinase 1
MAPK14 mitogen-activated protein kinase 14
MAPK3 mitogen-activated protein kinase 3
MAPK9 mitogen-activated protein kinase 9
MAPT microtubule-associated protein tau
MCAM melanoma cell adhesion molecule
MECP2 methyl CpG binding protein 2
MEF2A myocyte enhancer factor 2A
MFN2 mitofusin 2
MITF microphthalmia-associated transcription factor
MPZ myelin protein zero
MSN moesin
MTOR mechanistic target of rapamycin (serine/threonine kinase)
MYBPC3 myosin binding protein C, cardiac
MYL12B myosin, light chain 12B, regulatory
MYL9 myosin, light chain 9, regulatory
MYLK myosin light chain kinase
MYO5A myosin VA (heavy chain 12, myoxin)
MYO6 myosin VI
NBN nibrin
NEFL neurofilament, light polypeptide
NEFM neurofilament, medium polypeptide
NEUROD1 neuronal differentiation 1
NGEF neuronal guanine nucleotide exchange factor
NGFR nerve growth factor receptor
NOLC1 nucleolar and coiled-body phosphoprotein 1
NOS1 nitric oxide synthase 1 (neuronal)
NPHS1 nephrosis 1, congenital, Finnish type (nephrin)
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin)
NR4A1 nuclear receptor subfamily 4, group A, member 1
NSFL1C NSFL1 (p97) cofactor (p47)
NTRK1 neurotrophic tyrosine kinase, receptor, type 1
NTRK2 neurotrophic tyrosine kinase, receptor, type 2
NUP210 nucleoporin 210kDa
OCLN occludin
OPRK1 opioid receptor, kappa 1
OSBP oxysterol binding protein
PAH phenylalanine hydroxylase
PAK1 p21 protein (Cdc42/Rac)-activated kinase 1
PAK7 p21 protein (Cdc42/Rac)-activated kinase 7
PAM peptidylglycine alpha-amidating monooxygenase
PANX2 pannexin 2
PARD3 par-3 family cell polarity regulator
PDE10A phosphodiesterase 10A
PDGFRA platelet-derived growth factor receptor, alpha polypeptide
PDGFRB platelet-derived growth factor receptor, beta polypeptide
PHB2 prohibitin 2
PI4KB phosphatidylinositol 4-kinase, catalytic, beta
PIP4K2A phosphatidylinositol-5-phosphate 4-kinase, type II, alpha
PLK1 polo-like kinase 1
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa
PPP1R12A protein phosphatase 1, regulatory subunit 12A
PPP1R12B protein phosphatase 1, regulatory subunit 12B
PPP1R9A protein phosphatase 1, regulatory subunit 9A
PRC1 protein regulator of cytokinesis 1
PRKCG protein kinase C, gamma
PRKCH protein kinase C, eta
PRKCI protein kinase C, iota
PRKCZ protein kinase C, zeta
PSMC5 proteasome (prosome, macropain) 26S subunit, ATPase, 5
PTEN phosphatase and tensin homolog
PTK2 protein tyrosine kinase 2
PTK2B protein tyrosine kinase 2 beta
PTPRE protein tyrosine phosphatase, receptor type, E
PXN paxillin
RAB11FIP5 RAB11 family interacting protein 5 (class I)
RAB3IP RAB3A interacting protein
RANGAP1 Ran GTPase activating protein 1
RASSF1 Ras association (RalGDS/AF-6) domain family member 1
RB1 retinoblastoma 1
RDX radixin
RET ret proto-oncogene
RHO rhodopsin
RHOB ras homolog family member B
RIMS1 regulating synaptic membrane exocytosis 1
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila)
RPS6 ribosomal protein S6
RPS6KA1 ribosomal protein S6 kinase, 90kDa, polypeptide 1
RPS6KA5 ribosomal protein S6 kinase, 90kDa, polypeptide 5
RPS6KB1 ribosomal protein S6 kinase, 70kDa, polypeptide 1
SDC2 syndecan 2
SH3PXD2A SH3 and PX domains 2A
SHC1 SHC (Src homology 2 domain containing) transforming protein 1
SIRPA signal-regulatory protein alpha
SIRT2 sirtuin 2
SLC12A1 solute carrier family 12 (sodium/potassium/chloride transporter), member 1
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2
SLC12A3 solute carrier family 12 (sodium/chloride transporter), member 3
SLC18A3 solute carrier family 18 (vesicular acetylcholine transporter), member 3
SMC1A structural maintenance of chromosomes 1A
SMURF1 SMAD specific E3 ubiquitin protein ligase 1
SNAP23 synaptosomal-associated protein, 23kDa
SNCA synuclein, alpha (non A4 component of amyloid precursor)
SORBS3 sorbin and SH3 domain containing 3
SPACA1 sperm acrosome associated 1
SPRY2 sprouty homolog 2 (Drosophila)
SPTBN1 spectrin, beta, non-erythrocytic 1
SRC SRC proto-oncogene, non-receptor tyrosine kinase
SSH1 slingshot protein phosphatase 1
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor)
STAT5B signal transducer and activator of transcription 5B
STK26 serine/threonine protein kinase 26
STK38 serine/threonine kinase 38
STK39 serine threonine kinase 39
STMN1 stathmin 1
STMN2 stathmin 2
STX1A syntaxin 1A (brain)
STX1B syntaxin 1B
STXBP1 syntaxin binding protein 1
SUGT1 SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)
SYN1 synapsin I
SYP synaptophysin
SYT12 synaptotagmin XII
TAOK2 TAO kinase 2
TERF1 telomeric repeat binding factor (NIMA-interacting) 1
TEX14 testis expressed 14
TIAM1 T-cell lymphoma invasion and metastasis 1
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase
TOP2A topoisomerase (DNA) II alpha 170kDa
TP53 tumor protein p53
TP73 tumor protein p73
TPT1 tumor protein, translationally-controlled 1
TRPV1 transient receptor potential cation channel, subfamily V, member 1
TTN titin
ULK1 unc-51 like autophagy activating kinase 1
USO1 USO1 vesicle transport factor
VASP vasodilator-stimulated phosphoprotein
VIM vimentin
WWOX WW domain containing oxidoreductase
YES1 YES proto-oncogene 1, Src family tyrosine kinase
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta