usher syndrome Gene Set

Dataset DISEASES Text-mining Gene-Disease Association Evidence Scores
Category disease or phenotype associations
Type disease
Description A syndrome characterized by a combination of hearing loss and visual impairment. (Human Disease Ontology, DOID_0050439)
Similar Terms
Downloads & Tools

Genes

133 genes co-occuring with the disease usher syndrome in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores dataset.

Symbol Name Standardized Value
MYO7A myosin VIIA 3.38083
USH2A Usher syndrome 2A (autosomal recessive, mild) 3.10682
USH1C Usher syndrome 1C (autosomal recessive, severe) 2.94997
PCDH15 protocadherin-related 15 2.85638
CDH23 cadherin-related 23 2.84616
CLRN1 clarin 1 2.45642
USH1G Usher syndrome 1G (autosomal recessive) 2.38144
DFNB31 deafness, autosomal recessive 31 2.36492
ADGRV1 adhesion G protein-coupled receptor V1 2.33239
PDZD7 PDZ domain containing 7 1.90242
GSK3B glycogen synthase kinase 3 beta 1.39957
RPGR retinitis pigmentosa GTPase regulator 1.35115
OTOP2 otopetrin 2 1.30401
OTOP3 otopetrin 3 1.27606
GJB2 gap junction protein, beta 2, 26kDa 1.25863
ABCA4 ATP-binding cassette, sub-family A (ABC1), member 4 1.19748
PCDH11Y protocadherin 11 Y-linked 1.18238
NINL ninein-like 1.17722
EML2 echinoderm microtubule associated protein like 2 1.16136
OTOP1 otopetrin 1 1.14815
PCDH11X protocadherin 11 X-linked 1.13247
GJD4 gap junction protein, delta 4, 40.1kDa 1.11603
CIB2 calcium and integrin binding family member 2 1.07488
C2ORF71 chromosome 2 open reading frame 71 1.06144
EML5 echinoderm microtubule associated protein like 5 1.04924
CHML choroideremia-like (Rab escort protein 2) 1.0362
CEP250 centrosomal protein 250kDa 1.02735
EYS eyes shut homolog (Drosophila) 1.02524
CDHR5 cadherin-related family member 5 0.999503
TRIOBP TRIO and F-actin binding protein 0.975062
MYH7B myosin, heavy chain 7B, cardiac muscle, beta 0.954108
LRRC18 leucine rich repeat containing 18 0.944106
DFNA5 deafness, autosomal dominant 5 0.939949
CDHR2 cadherin-related family member 2 0.925865
MYO15A myosin XVA 0.921736
MED12L mediator complex subunit 12-like 0.915551
POU4F3 POU class 4 homeobox 3 0.904854
PDE4DIP phosphodiesterase 4D interacting protein 0.849945
CRB1 crumbs family member 1, photoreceptor morphogenesis associated 0.849945
PLXNA4 plexin A4 0.843802
SIAH2 siah E3 ubiquitin protein ligase 2 0.840934
CETN1 centrin, EF-hand protein, 1 0.840525
OPA1 optic atrophy 1 (autosomal dominant) 0.778204
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.756564
POU3F4 POU class 3 homeobox 4 0.745172
MYO6 myosin VI 0.740299
URI1 URI1, prefoldin-like chaperone 0.739488
TTC21B tetratricopeptide repeat domain 21B 0.736649
CDHR1 cadherin-related family member 1 0.70434
ABHD12 abhydrolase domain containing 12 0.700321
USHBP1 Usher syndrome 1C binding protein 1 0.695504
PRPH2 peripherin 2 (retinal degeneration, slow) 0.6939
GBX2 gastrulation brain homeobox 2 0.690293
COCH cochlin 0.664372
SLC26A5 solute carrier family 26 (anion exchanger), member 5 0.656046
MYO5A myosin VA (heavy chain 12, myoxin) 0.654463
SPAG5 sperm associated antigen 5 0.647348
PNKP polynucleotide kinase 3'-phosphatase 0.637495
RPAP3 RNA polymerase II associated protein 3 0.637495
MYO5B myosin VB 0.636708
GNAZ guanine nucleotide binding protein (G protein), alpha z polypeptide 0.633956
DOCK5 dedicator of cytokinesis 5 0.628065
DOCK2 dedicator of cytokinesis 2 0.626495
P2RY14 purinergic receptor P2Y, G-protein coupled, 14 0.612401
EPB41 erythrocyte membrane protein band 4.1 0.610057
RPGRIP1 retinitis pigmentosa GTPase regulator interacting protein 1 0.595233
PDE6B phosphodiesterase 6B, cGMP-specific, rod, beta 0.595233
STRCP1 stereocilin pseudogene 1 0.590948
STRC stereocilin 0.590948
EML1 echinoderm microtubule associated protein like 1 0.576939
KCNV2 potassium channel, voltage gated modifier subfamily V, member 2 0.561781
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.559062
TSPAN1 tetraspanin 1 0.558285
DOCK4 dedicator of cytokinesis 4 0.555568
C19ORF12 chromosome 19 open reading frame 12 0.548195
CIB1 calcium and integrin binding 1 (calmyrin) 0.544318
RAB27A RAB27A, member RAS oncogene family 0.54393
GSTT2 glutathione S-transferase theta 2 (gene/pseudogene) 0.537731
MLPH melanophilin 0.535022
MAPRE2 microtubule-associated protein, RP/EB family, member 2 0.531541
RHO rhodopsin 0.529608
RPE65 retinal pigment epithelium-specific protein 65kDa 0.528063
GUCA1A guanylate cyclase activator 1A (retina) 0.528063
GSTT2B glutathione S-transferase theta 2B (gene/pseudogene) 0.526132
GJB6 gap junction protein, beta 6, 30kDa 0.513802
PCBD1 pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha 0.513033
RP2 retinitis pigmentosa 2 (X-linked recessive) 0.511112
PEX6 peroxisomal biogenesis factor 6 0.511112
RIMS1 regulating synaptic membrane exocytosis 1 0.499231
ATP2B2 ATPase, Ca++ transporting, plasma membrane 2 0.498467
PDC phosducin 0.494266
NMNAT1 nicotinamide nucleotide adenylyltransferase 1 0.487788
GNAT2 guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2 0.479047
LCA5 Leber congenital amaurosis 5 0.478289
CACNA1D calcium channel, voltage-dependent, L type, alpha 1D subunit 0.473361
TECTA tectorin alpha 0.466928
BBS7 Bardet-Biedl syndrome 7 0.453716
MAP4 microtubule-associated protein 4 0.442418
KLHL2 kelch-like family member 2 0.415398
ESPN espin 0.413901
ANK3 ankyrin 3, node of Ranvier (ankyrin G) 0.406798
OTOF otoferlin 0.406425
PCP2 Purkinje cell protein 2 0.401945
FRMD6 FERM domain containing 6 0.393374
IFT88 intraflagellar transport 88 0.387051
CTCFL CCCTC-binding factor (zinc finger protein)-like 0.33651
CNGB3 cyclic nucleotide gated channel beta 3 0.333583
NEK2 NIMA-related kinase 2 0.331756
FN1 fibronectin 1 0.3292
MAP2 microtubule-associated protein 2 0.324823
TUB tubby bipartite transcription factor 0.319363
SLC26A4 solute carrier family 26 (anion exchanger), member 4 0.317182
LIG3 ligase III, DNA, ATP-dependent 0.313552
RD3 retinal degeneration 3 0.313189
GRK1 G protein-coupled receptor kinase 1 0.304864
HRK harakiri, BCL2 interacting protein 0.303781
SIAH1 siah E3 ubiquitin protein ligase 1 0.297651
POU4F1 POU class 4 homeobox 1 0.283655
PPP6C protein phosphatase 6, catalytic subunit 0.272241
MKKS McKusick-Kaufman syndrome 0.264077
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.261952
CXADR coxsackie virus and adenovirus receptor 0.251366
CLOCK clock circadian regulator 0.228333
ANK1 ankyrin 1, erythrocytic 0.225229
FZD4 frizzled class receptor 4 0.193285
ENPEP glutamyl aminopeptidase (aminopeptidase A) 0.185016
ABCC8 ATP-binding cassette, sub-family C (CFTR/MRP), member 8 0.182086
RCVRN recoverin 0.176215
MEF2C myocyte enhancer factor 2C 0.173832
SIX1 SIX homeobox 1 0.166095
PPP2CA protein phosphatase 2, catalytic subunit, alpha isozyme 0.160761
TGFB2 transforming growth factor, beta 2 0.158605
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.157765