variable expressivity Gene Set

Dataset HPO Gene-Disease Associations
Category disease or phenotype associations
Type phenotype
Description A variable severity of phenotypic features. (Human Phenotype Ontology, HP_0003828)
External Link http://compbio.charite.de/hpoweb/showterm?id=HP:0003828
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Genes

144 genes associated with the variable expressivity phenotype by mapping known disease genes to disease phenotypes from the HPO Gene-Disease Associations dataset.

Symbol Name
AARS alanyl-tRNA synthetase
ACTA1 actin, alpha 1, skeletal muscle
ADCK3 aarF domain containing kinase 3
AGK acylglycerol kinase
AGRN agrin
ALAS2 5'-aminolevulinate synthase 2
ANO5 anoctamin 5
ANTXR2 anthrax toxin receptor 2
APC adenomatous polyposis coli
ASAH1 N-acylsphingosine amidohydrolase (acid ceramidase) 1
ATL1 atlastin GTPase 1
BCS1L BC1 (ubiquinol-cytochrome c reductase) synthesis-like
BICD2 bicaudal D homolog 2 (Drosophila)
C12ORF65 chromosome 12 open reading frame 65
C19ORF12 chromosome 19 open reading frame 12
CANT1 calcium activated nucleotidase 1
CAV1 caveolin 1, caveolae protein, 22kDa
CD27 CD27 molecule
CD3E CD3e molecule, epsilon (CD3-TCR complex)
CD3G CD3g molecule, gamma (CD3-TCR complex)
CECR1 cat eye syndrome chromosome region, candidate 1
CFAP53 cilia and flagella associated protein 53
CFD complement factor D (adipsin)
CHRNA1 cholinergic receptor, nicotinic, alpha 1 (muscle)
CHRNB1 cholinergic receptor, nicotinic, beta 1 (muscle)
CHRND cholinergic receptor, nicotinic, delta (muscle)
CHRNE cholinergic receptor, nicotinic, epsilon (muscle)
COL4A1 collagen, type IV, alpha 1
COL4A2 collagen, type IV, alpha 2
COL6A1 collagen, type VI, alpha 1
COL6A2 collagen, type VI, alpha 2
COL6A3 collagen, type VI, alpha 3
CREBBP CREB binding protein
CSPP1 centrosome and spindle pole associated protein 1
CYP2U1 cytochrome P450, family 2, subfamily U, polypeptide 1
DARS2 aspartyl-tRNA synthetase 2, mitochondrial
DHFR dihydrofolate reductase
DLD dihydrolipoamide dehydrogenase
DPAGT1 dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)
DPM1 dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit
EBP emopamil binding protein (sterol isomerase)
EGR2 early growth response 2
EHHADH enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase
ERCC1 excision repair cross-complementation group 1
EYA1 EYA transcriptional coactivator and phosphatase 1
F10 coagulation factor X
F2 coagulation factor II (thrombin)
F7 coagulation factor VII (serum prothrombin conversion accelerator)
FAM126A family with sequence similarity 126, member A
FBXO38 F-box protein 38
FGFR2 fibroblast growth factor receptor 2
FKRP fukutin related protein
FKTN fukutin
GABRG2 gamma-aminobutyric acid (GABA) A receptor, gamma 2
GATA1 GATA binding protein 1 (globin transcription factor 1)
GCH1 GTP cyclohydrolase 1
GDF6 growth differentiation factor 6
GFI1B growth factor independent 1B transcription repressor
GJB6 gap junction protein, beta 6, 30kDa
GLI2 GLI family zinc finger 2
GLI3 GLI family zinc finger 3
GMPPB GDP-mannose pyrophosphorylase B
GNAS GNAS complex locus
GP6 glycoprotein VI (platelet)
GRIN2A glutamate receptor, ionotropic, N-methyl D-aspartate 2A
HGSNAT heparan-alpha-glucosaminide N-acetyltransferase
HSD11B2 hydroxysteroid (11-beta) dehydrogenase 2
KANSL1 KAT8 regulatory NSL complex subunit 1
KCNA1 potassium channel, voltage gated shaker related subfamily A, member 1
KLHL41 kelch-like family member 41
KRT14 keratin 14, type I
KRT5 keratin 5, type II
KRT81 keratin 81, type II
KRT83 keratin 83, type II
KRT86 keratin 86, type II
LMNA lamin A/C
MATR3 matrin 3
MBTPS2 membrane-bound transcription factor peptidase, site 2
MEGF10 multiple EGF-like-domains 10
MFN2 mitofusin 2
MITF microphthalmia-associated transcription factor
MPC1 mitochondrial pyruvate carrier 1
MPZ myelin protein zero
MRPL44 mitochondrial ribosomal protein L44
MUSK muscle, skeletal, receptor tyrosine kinase
MYOT myotilin
NEFL neurofilament, light polypeptide
NF2 neurofibromin 2 (merlin)
NIPA1 non imprinted in Prader-Willi/Angelman syndrome 1
NPHS2 nephrosis 2, idiopathic, steroid-resistant (podocin)
PAFAH1B1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)
PAK3 p21 protein (Cdc42/Rac)-activated kinase 3
PAX3 paired box 3
PDHX pyruvate dehydrogenase complex, component X
PFKM phosphofructokinase, muscle
PITX2 paired-like homeodomain 2
PMP22 peripheral myelin protein 22
PNPLA2 patatin-like phospholipase domain containing 2
POLG polymerase (DNA directed), gamma
POLG2 polymerase (DNA directed), gamma 2, accessory subunit
POMT1 protein-O-mannosyltransferase 1
POMT2 protein-O-mannosyltransferase 2
PRICKLE2 prickle homolog 2 (Drosophila)
PROC protein C (inactivator of coagulation factors Va and VIIIa)
PRX periaxin
PSAP prosaposin
PTCH1 patched 1
PTCH2 patched 2
PTPRO protein tyrosine phosphatase, receptor type, O
QDPR quinoid dihydropteridine reductase
RAPSN receptor-associated protein of the synapse
REEP1 receptor accessory protein 1
ROGDI rogdi homolog (Drosophila)
SCN1A sodium channel, voltage gated, type I alpha subunit
SCN2A sodium channel, voltage gated, type II alpha subunit
SCN9A sodium channel, voltage gated, type IX alpha subunit
SEPN1 selenoprotein N, 1
SETX senataxin
SFXN4 sideroflexin 4
SGCA sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)
SHH sonic hedgehog
SIX3 SIX homeobox 3
SLC10A2 solute carrier family 10 (sodium/bile acid cotransporter), member 2
SLC30A10 solute carrier family 30, member 10
SLC3A1 solute carrier family 3 (amino acid transporter heavy chain), member 1
SLC52A2 solute carrier family 52 (riboflavin transporter), member 2
SLC5A2 solute carrier family 5 (sodium/glucose cotransporter), member 2
SLC7A9 solute carrier family 7 (amino acid transporter light chain, bo,+ system), member 9
SLX4 SLX4 structure-specific endonuclease subunit
SPAST spastin
SPR sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)
SPTAN1 spectrin, alpha, non-erythrocytic 1
SUFU suppressor of fused homolog (Drosophila)
TBC1D24 TBC1 domain family, member 24
TH tyrosine hydroxylase
TK2 thymidine kinase 2, mitochondrial
TPM2 tropomyosin 2 (beta)
TPM3 tropomyosin 3
TRPV4 transient receptor potential cation channel, subfamily V, member 4
TUBB4A tubulin, beta 4A class IVa
TUBG1 tubulin, gamma 1
TWIST1 twist family bHLH transcription factor 1
VWF von Willebrand factor
ZBTB18 zinc finger and BTB domain containing 18