venetoclax_A-427 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description venetoclax perturbation in A-427 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the venetoclax_A-427 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.205076
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.164139
VIM vimentin 0.14563
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.125698
ALDH1A1 aldehyde dehydrogenase 1 family, member A1 0.100792
ANXA1 annexin A1 0.0870758
MMP12 matrix metallopeptidase 12 0.0845843
PDE4D phosphodiesterase 4D, cAMP-specific 0.0843682
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0782823
KIF5B kinesin family member 5B 0.0698729
NLGN1 neuroligin 1 0.0692296
NAP1L1 nucleosome assembly protein 1-like 1 0.067556
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.0669942
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0603489
DST dystonin 0.059889
TOP2A topoisomerase (DNA) II alpha 170kDa 0.057283
ENO1 enolase 1, (alpha) 0.0565372
SMC4 structural maintenance of chromosomes 4 0.056146
XPO1 exportin 1 0.0538204
TENM3 teneurin transmembrane protein 3 0.0519112
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0515879
TPI1 triosephosphate isomerase 1 0.0495347
CALR calreticulin 0.0491216
HDAC9 histone deacetylase 9 0.0486581
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0484953
FXR1 fragile X mental retardation, autosomal homolog 1 0.0473026
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0467111
CENPF centromere protein F, 350/400kDa 0.0464979
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0441263
LDHA lactate dehydrogenase A 0.0409498
CDK6 cyclin-dependent kinase 6 0.0408054
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0406994
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 0.0402751
AREG amphiregulin 0.0397142
ERBB4 erb-b2 receptor tyrosine kinase 4 0.0391864
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric 0.0389195
BIRC3 baculoviral IAP repeat containing 3 0.0378063
TMSB10 thymosin beta 10 0.0377801
MKI67 marker of proliferation Ki-67 0.0375133
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0374095
ZBTB20 zinc finger and BTB domain containing 20 0.0364229
ECT2 epithelial cell transforming 2 0.0341501
GOLGB1 golgin B1 0.033176
CLDN1 claudin 1 0.0330442
TPM3 tropomyosin 3 0.0326368
NIPBL Nipped-B homolog (Drosophila) 0.0321674
GJA1 gap junction protein, alpha 1, 43kDa 0.0319925
MPG N-methylpurine-DNA glycosylase 0.0312054
ERRFI1 ERBB receptor feedback inhibitor 1 0.0308287
CANX calnexin 0.0307382
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0307235
ZSWIM6 zinc finger, SWIM-type containing 6 0.0305985
KTN1 kinectin 1 (kinesin receptor) 0.0305527
MYL12B myosin, light chain 12B, regulatory 0.0299793
WWOX WW domain containing oxidoreductase 0.0292245
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0292169
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0290812
CKAP5 cytoskeleton associated protein 5 0.0290674
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.0287017
IFIH1 interferon induced with helicase C domain 1 0.0286668
TPX2 TPX2, microtubule-associated 0.028605
ZNF292 zinc finger protein 292 0.0285268
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0283396
PTGES3 prostaglandin E synthase 3 (cytosolic) 0.0281841
NEK7 NIMA-related kinase 7 0.0277704
PCM1 pericentriolar material 1 0.0275867
PDIA6 protein disulfide isomerase family A, member 6 0.0273678
PTMA prothymosin, alpha 0.0272118
SMC3 structural maintenance of chromosomes 3 0.0272018
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0271869
NEBL nebulette 0.0269783
STMN1 stathmin 1 0.0267874
ROCK1 Rho-associated, coiled-coil containing protein kinase 1 0.0267401
YBX1 Y box binding protein 1 0.0257513
PLK2 polo-like kinase 2 0.0257194
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0256097
NCAPD2 non-SMC condensin I complex, subunit D2 0.0253858
XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) 0.0253181
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0253017
CRISPLD1 cysteine-rich secretory protein LCCL domain containing 1 0.0252423
VMP1 vacuole membrane protein 1 0.0250214
HNRNPR heterogeneous nuclear ribonucleoprotein R 0.0247012
CCT5 chaperonin containing TCP1, subunit 5 (epsilon) 0.023897
SET SET nuclear proto-oncogene 0.0238416
CEP192 centrosomal protein 192kDa 0.0236621
PRKCI protein kinase C, iota 0.023405
TNPO1 transportin 1 0.0233794
YBX3 Y box binding protein 3 0.0232675
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0232076
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0230707
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0224604
SPAG9 sperm associated antigen 9 0.0221369
SQSTM1 sequestosome 1 0.0221095
PRRC2C proline-rich coiled-coil 2C 0.0220901
PDK4 pyruvate dehydrogenase kinase, isozyme 4 0.0220793
ARID1B AT rich interactive domain 1B (SWI1-like) 0.0220784
CSDE1 cold shock domain containing E1, RNA-binding 0.0219658
CAND1 cullin-associated and neddylation-dissociated 1 0.0218633
KDM3A lysine (K)-specific demethylase 3A 0.0218246
HMGB2 high mobility group box 2 0.0215363

decreased expression

Symbol Name Standardized Value
EGR1 early growth response 1 -0.077463
NHSL1 NHS-like 1 -0.0561968
EHBP1 EH domain binding protein 1 -0.0540467
RASAL2 RAS protein activator like 2 -0.0506089
ZNF804A zinc finger protein 804A -0.0475497
RAB7A RAB7A, member RAS oncogene family -0.04465
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.040663
SERPINB2 serpin peptidase inhibitor, clade B (ovalbumin), member 2 -0.0393921
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0389825
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.034443
HMGA1 high mobility group AT-hook 1 -0.0334596
ACTG1 actin gamma 1 -0.031886
NABP1 nucleic acid binding protein 1 -0.0307132
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0292603
NAV3 neuron navigator 3 -0.0273314
RPL35A ribosomal protein L35a -0.0258152
CUBN cubilin (intrinsic factor-cobalamin receptor) -0.0256599
ASPH aspartate beta-hydroxylase -0.0253768
CCN2 cellular communication network factor 2 -0.0235051
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.022902
KCMF1 potassium channel modulatory factor 1 -0.0219657
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0219224
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila) -0.0213804
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0206456
KDM4C lysine (K)-specific demethylase 4C -0.0204661
HMGA2 high mobility group AT-hook 2 -0.0202465
INTS6 integrator complex subunit 6 -0.0198381
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0191481
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0188178
FASN fatty acid synthase -0.0188017
GPHN gephyrin -0.0186632
L3MBTL4 l(3)mbt-like 4 (Drosophila) -0.0185413
MARCHF4 membrane associated ring-CH-type finger 4 -0.018197
LARP4B La ribonucleoprotein domain family, member 4B -0.0176706
ANK2 ankyrin 2, neuronal -0.0175888
RPS13 ribosomal protein S13 -0.0173434
NECTIN3 nectin cell adhesion molecule 3 -0.0170304
CMIP c-Maf inducing protein -0.0164746
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 -0.0161585
RPL13A ribosomal protein L13a -0.0158722
ATN1 atrophin 1 -0.0158053
CDH12 cadherin 12, type 2 (N-cadherin 2) -0.0157538
DIAPH2 diaphanous-related formin 2 -0.0154887
RCC1 regulator of chromosome condensation 1 -0.015446
RPS21 ribosomal protein S21 -0.0152917
MTCL1 microtubule crosslinking factor 1 -0.0152085
BMPR1B bone morphogenetic protein receptor, type IB -0.0150032
TM4SF1 transmembrane 4 L six family member 1 -0.0147232
RCOR1 REST corepressor 1 -0.0143759
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0142316
RPL37A ribosomal protein L37a -0.0142024
ERC1 ELKS/RAB6-interacting/CAST family member 1 -0.0140652
HLA-A major histocompatibility complex, class I, A -0.0139374
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0138332
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0132196
SYT1 synaptotagmin I -0.0131117
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0129029
MSRB3 methionine sulfoxide reductase B3 -0.0128994
NR5A2 nuclear receptor subfamily 5, group A, member 2 -0.0126667
KMT2D lysine (K)-specific methyltransferase 2D -0.01261
PTPRF protein tyrosine phosphatase, receptor type, F -0.0123226
FGFR1 fibroblast growth factor receptor 1 -0.0122209
CDK17 cyclin-dependent kinase 17 -0.0122151
TAPBP TAP binding protein (tapasin) -0.0121159
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.012017
SLC20A2 solute carrier family 20 (phosphate transporter), member 2 -0.0118532
THSD4 thrombospondin, type I, domain containing 4 -0.0118177
BRD4 bromodomain containing 4 -0.0118072
ATP5F1B ATP synthase F1 subunit beta -0.0116512
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 -0.0116226
EGFR epidermal growth factor receptor -0.011545
VCAN versican -0.0114998
PGGHG protein-glucosylgalactosylhydroxylysine glucosidase -0.011488
UBE2D2 ubiquitin-conjugating enzyme E2D 2 -0.0114033
PCBD2 pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2 -0.0111977
SESN2 sestrin 2 -0.0110578
DNAH14 dynein, axonemal, heavy chain 14 -0.0109661
RPS24 ribosomal protein S24 -0.010954
EEF1D eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) -0.01083
COMMD1 copper metabolism (Murr1) domain containing 1 -0.0107773
MCL1 myeloid cell leukemia 1 -0.0107494
RPS29 ribosomal protein S29 -0.0106753
DENND5A DENN/MADD domain containing 5A -0.0106438
FOSL1 FOS-like antigen 1 -0.0105585
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0104666
RPL31 ribosomal protein L31 -0.0104127
TIMP2 TIMP metallopeptidase inhibitor 2 -0.0104095
NLK nemo-like kinase -0.0103828
FADS2 fatty acid desaturase 2 -0.0103439
PACS1 phosphofurin acidic cluster sorting protein 1 -0.0102066
RPL34 ribosomal protein L34 -0.0101043
DENND1A DENN/MADD domain containing 1A -0.00997397
SLC7A5 solute carrier family 7 (amino acid transporter light chain, L system), member 5 -0.00997324
HSPB1 heat shock 27kDa protein 1 -0.00997297
KSR2 kinase suppressor of ras 2 -0.00975445
SLCO1B3 solute carrier organic anion transporter family, member 1B3 -0.00966104
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 -0.00964332
RPL28 ribosomal protein L28 -0.00961953
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.00958452
AHRR aryl-hydrocarbon receptor repressor -0.00952263