venetoclax_MIA PaCa-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description venetoclax perturbation in MIA PaCa-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the venetoclax_MIA PaCa-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
DST dystonin 0.232062
TP63 tumor protein p63 0.121201
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.111578
BIRC3 baculoviral IAP repeat containing 3 0.0874095
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0851393
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0826751
HDAC9 histone deacetylase 9 0.0796192
SP100 SP100 nuclear antigen 0.0716669
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0657588
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.0613247
ERRFI1 ERBB receptor feedback inhibitor 1 0.0601962
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0588073
ZSWIM6 zinc finger, SWIM-type containing 6 0.0568759
SPAG9 sperm associated antigen 9 0.0517821
PRELID2 PRELI domain containing 2 0.0511756
EPHA4 EPH receptor A4 0.0489295
IFIH1 interferon induced with helicase C domain 1 0.0481244
PLK2 polo-like kinase 2 0.0473095
EREG epiregulin 0.0459821
ENO1 enolase 1, (alpha) 0.0440138
DPYD dihydropyrimidine dehydrogenase 0.0433797
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0433405
PLSCR1 phospholipid scramblase 1 0.042081
INTS6 integrator complex subunit 6 0.0407153
MYOF myoferlin 0.0406884
GNGT1 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 0.0406604
SQSTM1 sequestosome 1 0.0401716
SDC4 syndecan 4 0.0382094
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0381256
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.036862
SLCO1B3 solute carrier organic anion transporter family, member 1B3 0.0366821
LDHA lactate dehydrogenase A 0.0364345
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0363456
SOD2 superoxide dismutase 2, mitochondrial 0.0358352
GOLGB1 golgin B1 0.0357771
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0357345
RNF213 ring finger protein 213 0.0354357
CXCL8 chemokine (C-X-C motif) ligand 8 0.0344897
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0326933
MB21D2 Mab-21 domain containing 2 0.0321881
MT1E metallothionein 1E 0.0314323
RIGI RNA sensor RIG-I 0.031225
CADM2 cell adhesion molecule 2 0.0308022
B2M beta-2-microglobulin 0.0302571
RAD51B RAD51 paralog B 0.0297595
ANKRD36 ankyrin repeat domain 36 0.0296525
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0293311
TNS3 tensin 3 0.0289333
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0286748
MCTP1 multiple C2 domains, transmembrane 1 0.0284227
ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 0.0277702
NAP1L1 nucleosome assembly protein 1-like 1 0.0273781
HLA-E major histocompatibility complex, class I, E 0.027301
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0272789
CFLAR CASP8 and FADD-like apoptosis regulator 0.0272786
HILPDA hypoxia inducible lipid droplet-associated 0.0271618
ASPH aspartate beta-hydroxylase 0.027143
MBD5 methyl-CpG binding domain protein 5 0.0270737
EXT1 exostosin glycosyltransferase 1 0.0270167
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like 0.0267717
SMYD3 SET and MYND domain containing 3 0.02647
CSMD3 CUB and Sushi multiple domains 3 0.0264242
HOMER1 homer scaffolding protein 1 0.0263149
TTC3 tetratricopeptide repeat domain 3 0.0262695
CANX calnexin 0.026246
RUNX1 runt-related transcription factor 1 0.0262061
HSPA8 heat shock 70kDa protein 8 0.0260175
BIRC2 baculoviral IAP repeat containing 2 0.0258282
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough 0.0255532
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0251977
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0250891
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0249812
RPS12 ribosomal protein S12 0.0249195
ANKIB1 ankyrin repeat and IBR domain containing 1 0.0246285
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 0.0245539
LYST lysosomal trafficking regulator 0.0242693
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0242421
FNIP1 folliculin interacting protein 1 0.0241915
BAZ1A bromodomain adjacent to zinc finger domain, 1A 0.0240468
SVIL supervillin 0.0234128
EGFR epidermal growth factor receptor 0.0232714
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0229928
DTX3L deltex 3 like, E3 ubiquitin ligase 0.0228548
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0228449
LPP LIM domain containing preferred translocation partner in lipoma 0.0228145
DOCK1 dedicator of cytokinesis 1 0.0226106
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0225448
ZDHHC14 zinc finger, DHHC-type containing 14 0.0223424
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0222502
ZNF638 zinc finger protein 638 0.0220506
IFIT1 interferon-induced protein with tetratricopeptide repeats 1 0.0220357
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0219566
AEBP2 AE binding protein 2 0.0216607
VCL vinculin 0.0212753
OSBPL8 oxysterol binding protein-like 8 0.0211272
ZBTB20 zinc finger and BTB domain containing 20 0.02074
NCEH1 neutral cholesterol ester hydrolase 1 0.0205673
TRIM56 tripartite motif containing 56 0.020373
VPS13C vacuolar protein sorting 13 homolog C (S. cerevisiae) 0.0200883
PARP9 poly (ADP-ribose) polymerase family, member 9 0.0200659

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.243183
VIM vimentin -0.151987
POTEF POTE ankyrin domain family, member F -0.118215
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.111013
TM4SF1 transmembrane 4 L six family member 1 -0.0963466
TXNRD1 thioredoxin reductase 1 -0.0960468
SLC38A2 solute carrier family 38, member 2 -0.0928211
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 -0.0905191
TMSB10 thymosin beta 10 -0.087637
HMGA1 high mobility group AT-hook 1 -0.0771145
EGR1 early growth response 1 -0.0752959
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0741629
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0739572
RAI1 retinoic acid induced 1 -0.0710135
ACTG1 actin gamma 1 -0.0701445
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0638544
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0629245
EEF2 eukaryotic translation elongation factor 2 -0.0571088
RTN4 reticulon 4 -0.0558893
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0512071
ZMYND8 zinc finger, MYND-type containing 8 -0.0508455
CENPF centromere protein F, 350/400kDa -0.0505192
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 -0.049255
FLNB filamin B, beta -0.047555
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0454645
TMEM41B transmembrane protein 41B -0.0444973
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0444281
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0416237
APP amyloid beta (A4) precursor protein -0.0404468
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 -0.0403646
FOSL1 FOS-like antigen 1 -0.0388157
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0384765
GPAT3 glycerol-3-phosphate acyltransferase 3 -0.038287
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0382179
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0373788
ADAM17 ADAM metallopeptidase domain 17 -0.036012
TNFRSF6B tumor necrosis factor receptor superfamily, member 6b, decoy -0.0355702
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0355643
PRRC2B proline-rich coiled-coil 2B -0.0355187
SPRY4 sprouty homolog 4 (Drosophila) -0.0351886
GARS1 glycyl-tRNA synthetase 1 -0.034759
FTH1 ferritin, heavy polypeptide 1 -0.0342243
PYGB phosphorylase, glycogen; brain -0.0338762
KMT2E lysine (K)-specific methyltransferase 2E -0.0338199
FMNL2 formin-like 2 -0.0337723
RPL35A ribosomal protein L35a -0.0337043
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.0333597
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0331384
UBE2E3 ubiquitin-conjugating enzyme E2E 3 -0.0325511
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0325386
ARHGAP5 Rho GTPase activating protein 5 -0.032357
WASF2 WAS protein family, member 2 -0.0320677
SLC20A1 solute carrier family 20 (phosphate transporter), member 1 -0.0320474
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0318234
RBM25 RNA binding motif protein 25 -0.0317342
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 -0.0315976
LOC112694756 uncharaterized LOC112694756 -0.0314105
BRD4 bromodomain containing 4 -0.0310509
FBXO11 F-box protein 11 -0.0306464
TRIP12 thyroid hormone receptor interactor 12 -0.0298399
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 -0.029805
TOP1 topoisomerase (DNA) I -0.0297136
SRPK2 SRSF protein kinase 2 -0.0295666
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0292795
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.028663
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0286114
MKI67 marker of proliferation Ki-67 -0.0285655
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.027946
TNFRSF10D tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain -0.0275758
TPM4 tropomyosin 4 -0.0271248
RAP2B RAP2B, member of RAS oncogene family -0.0267976
GSK3B glycogen synthase kinase 3 beta -0.0267513
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0266116
WSB1 WD repeat and SOCS box containing 1 -0.0264991
THSD4 thrombospondin, type I, domain containing 4 -0.0261669
EZR ezrin -0.0261292
SPRED2 sprouty-related, EVH1 domain containing 2 -0.0261205
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 -0.0260607
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0259232
MYC v-myc avian myelocytomatosis viral oncogene homolog -0.0258287
MAP4 microtubule-associated protein 4 -0.0258261
GCLM glutamate-cysteine ligase, modifier subunit -0.0256176
TUBB6 tubulin, beta 6 class V -0.0252888
PNISR PNN-interacting serine/arginine-rich protein -0.0252468
ITGB4 integrin, beta 4 -0.0252347
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 -0.0251583
ANKRD11 ankyrin repeat domain 11 -0.0247151
BCAR3 breast cancer anti-estrogen resistance 3 -0.0245776
CCNL1 cyclin L1 -0.0245368
PFN1 profilin 1 -0.0245207
PKM pyruvate kinase, muscle -0.0241218
ATN1 atrophin 1 -0.0239937
CELF1 CUGBP, Elav-like family member 1 -0.0239681
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0239264
PTPRF protein tyrosine phosphatase, receptor type, F -0.0238618
TAPBP TAP binding protein (tapasin) -0.0237881
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.02362
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) -0.0235067
WWTR1 WW domain containing transcription regulator 1 -0.0233701
MIS18BP1 MIS18 binding protein 1 -0.0232777