venetoclax_NCI-H2347 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description venetoclax perturbation in NCI-H2347 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the venetoclax_NCI-H2347 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SAMD4A sterile alpha motif domain containing 4A 0.122046
ZSWIM6 zinc finger, SWIM-type containing 6 0.120627
EXT1 exostosin glycosyltransferase 1 0.116457
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.116385
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.110108
PARP14 poly (ADP-ribose) polymerase family, member 14 0.103783
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0836238
LPP LIM domain containing preferred translocation partner in lipoma 0.0815289
EFNA5 ephrin-A5 0.0735011
LIMCH1 LIM and calponin homology domains 1 0.0704715
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0702904
ALCAM activated leukocyte cell adhesion molecule 0.068466
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0681514
GOLGB1 golgin B1 0.0642903
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.063565
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0575075
DSPP dentin sialophosphoprotein 0.056987
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0569295
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.0567397
ENO1 enolase 1, (alpha) 0.0550492
TRIO trio Rho guanine nucleotide exchange factor 0.0522949
IFI16 interferon, gamma-inducible protein 16 0.0512142
PDLIM5 PDZ and LIM domain 5 0.0505648
MYO6 myosin VI 0.0491578
NAV2 neuron navigator 2 0.0491177
CANX calnexin 0.0476869
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0475939
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0475118
RNF213 ring finger protein 213 0.047112
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 0.0469035
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.0464685
FBXO32 F-box protein 32 0.0463105
ERBIN erbb2 interacting protein 0.0456886
VCL vinculin 0.045321
MYO1E myosin IE 0.0437977
FNDC3B fibronectin type III domain containing 3B 0.0434557
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0431594
MX1 MX dynamin-like GTPase 1 0.0431085
MYOF myoferlin 0.042948
SEC31A SEC31 homolog A (S. cerevisiae) 0.0417181
FNIP1 folliculin interacting protein 1 0.0415701
PLSCR1 phospholipid scramblase 1 0.0412347
APLP2 amyloid beta (A4) precursor-like protein 2 0.0405759
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0398079
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0394554
ANKRD17 ankyrin repeat domain 17 0.0393249
ARHGAP20 Rho GTPase activating protein 20 0.038657
AFF1 AF4/FMR2 family, member 1 0.0380559
LDHA lactate dehydrogenase A 0.0377511
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0376693
SP100 SP100 nuclear antigen 0.0371866
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like 0.0371808
AKAP13 A kinase (PRKA) anchor protein 13 0.0371453
HERC5 HECT and RLD domain containing E3 ubiquitin protein ligase 5 0.0369759
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0363461
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0362731
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0361503
RAD51B RAD51 paralog B 0.0360294
CD109 CD109 molecule 0.0359938
PGBD5 piggyBac transposable element derived 5 0.0358296
FAM13A family with sequence similarity 13, member A 0.0357229
PALLD palladin, cytoskeletal associated protein 0.0352487
DST dystonin 0.0350098
SCFD1 sec1 family domain containing 1 0.0347736
CEP350 centrosomal protein 350kDa 0.0347681
MACC1 metastasis associated in colon cancer 1 0.0347085
RIGI RNA sensor RIG-I 0.0343367
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.0341117
TTC3 tetratricopeptide repeat domain 3 0.0339741
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.033465
ETV6 ets variant 6 0.0333657
SPATS2L spermatogenesis associated, serine-rich 2-like 0.0332151
BAZ1A bromodomain adjacent to zinc finger domain, 1A 0.0331071
MX2 MX dynamin-like GTPase 2 0.0313633
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0312981
ARHGAP5 Rho GTPase activating protein 5 0.0312376
KDM2A lysine (K)-specific demethylase 2A 0.0305501
RAB11FIP1 RAB11 family interacting protein 1 (class I) 0.0304469
ANKIB1 ankyrin repeat and IBR domain containing 1 0.0303916
TXNIP thioredoxin interacting protein 0.0302927
MACF1 microtubule-actin crosslinking factor 1 0.0300416
TMF1 TATA element modulatory factor 1 0.0296924
MAP3K13 mitogen-activated protein kinase kinase kinase 13 0.0296325
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.029591
INTS6 integrator complex subunit 6 0.0294512
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.029313
RAB10 RAB10, member RAS oncogene family 0.0289938
MYH9 myosin, heavy chain 9, non-muscle 0.0288797
COPB1 coatomer protein complex, subunit beta 1 0.028842
CTNND1 catenin (cadherin-associated protein), delta 1 0.0288177
SQSTM1 sequestosome 1 0.0285411
IFIH1 interferon induced with helicase C domain 1 0.0284301
PTK2 protein tyrosine kinase 2 0.0283993
ARRDC3 arrestin domain containing 3 0.0283831
CSNK1A1 casein kinase 1, alpha 1 0.0283407
SAMD12 sterile alpha motif domain containing 12 0.0281332
RAI14 retinoic acid induced 14 0.0279855
ATXN1 ataxin 1 0.02795
ZBTB20 zinc finger and BTB domain containing 20 0.0278742
PHF3 PHD finger protein 3 0.0278624

decreased expression

Symbol Name Standardized Value
FN1 fibronectin 1 -0.156093
NDRG1 N-myc downstream regulated 1 -0.140424
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.132191
HMGA1 high mobility group AT-hook 1 -0.0947267
ACTG1 actin gamma 1 -0.0792304
FTL ferritin, light polypeptide -0.0486372
TMSB10 thymosin beta 10 -0.0474514
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0434708
RPL35A ribosomal protein L35a -0.0429149
POTEF POTE ankyrin domain family, member F -0.0419704
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.041487
NAMPT nicotinamide phosphoribosyltransferase -0.0392712
FAM3C family with sequence similarity 3, member C -0.0368164
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0362873
S100A6 S100 calcium binding protein A6 -0.0309683
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0297665
IGFBP3 insulin-like growth factor binding protein 3 -0.0292616
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0272485
USP3 ubiquitin specific peptidase 3 -0.0265043
GARS1 glycyl-tRNA synthetase 1 -0.0264598
FAM162A family with sequence similarity 162, member A -0.02598
PTMA prothymosin, alpha -0.025775
FOSL1 FOS-like antigen 1 -0.0257338
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 -0.0255496
RPL34 ribosomal protein L34 -0.0251539
MT2A metallothionein 2A -0.0250845
TFG TRK-fused gene -0.0242139
CCNL1 cyclin L1 -0.0239624
RPS19 ribosomal protein S19 -0.0235884
AREG amphiregulin -0.0217138
RPL8 ribosomal protein L8 -0.0215428
CCND1 cyclin D1 -0.0211028
TSC22D2 TSC22 domain family, member 2 -0.0210581
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0207187
MARCHF6 membrane associated ring-CH-type finger 6 -0.0202163
RPL28 ribosomal protein L28 -0.0200422
TOP1 topoisomerase (DNA) I -0.0197903
MSMO1 methylsterol monooxygenase 1 -0.0194354
PTP4A2 protein tyrosine phosphatase type IVA, member 2 -0.0194281
G0S2 G0/G1 switch 2 -0.0192234
FLNA filamin A, alpha -0.0190007
LAMB3 laminin, beta 3 -0.0188772
RNF145 ring finger protein 145 -0.0188642
PKM pyruvate kinase, muscle -0.0181978
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0177118
GNAS GNAS complex locus -0.0175481
RPS29 ribosomal protein S29 -0.0174955
ATP5F1B ATP synthase F1 subunit beta -0.017366
NUP58 nucleoporin 58 -0.0170456
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0169296
RTN4 reticulon 4 -0.0168125
LY6E lymphocyte antigen 6 complex, locus E -0.0166982
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9 -0.0163597
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0163497
LOC112694756 uncharaterized LOC112694756 -0.0162014
SREK1 splicing regulatory glutamine/lysine-rich protein 1 -0.0161988
ADAM9 ADAM metallopeptidase domain 9 -0.0160672
CRABP2 cellular retinoic acid binding protein 2 -0.0158037
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0156237
PLEC plectin -0.0155221
FTH1 ferritin, heavy polypeptide 1 -0.0154582
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0152714
TRA2B transformer 2 beta homolog (Drosophila) -0.0151991
UQCRB ubiquinol-cytochrome c reductase binding protein -0.0149566
NDFIP1 Nedd4 family interacting protein 1 -0.0148506
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha -0.0148425
ENO2 enolase 2 (gamma, neuronal) -0.0147395
RPL5 ribosomal protein L5 -0.0147142
MBOAT2 membrane bound O-acyltransferase domain containing 2 -0.014426
UGCG UDP-glucose ceramide glucosyltransferase -0.0143577
CLDN4 claudin 4 -0.0142639
TM4SF1 transmembrane 4 L six family member 1 -0.0140714
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) -0.0139646
CCNI cyclin I -0.0139283
RPL36 ribosomal protein L36 -0.0138344
MXD1 MAX dimerization protein 1 -0.0137477
PHLDA2 pleckstrin homology-like domain, family A, member 2 -0.0136243
RPS23 ribosomal protein S23 -0.0136232
PABPN1 poly(A) binding protein, nuclear 1 -0.0136127
SPINT2 serine peptidase inhibitor, Kunitz type, 2 -0.0135929
RPS21 ribosomal protein S21 -0.0135164
RPLP2 ribosomal protein, large, P2 -0.0135071
PFN1 profilin 1 -0.0133531
G2E3 G2/M-phase specific E3 ubiquitin protein ligase -0.0131589
MDK midkine (neurite growth-promoting factor 2) -0.0130296
BHLHE40 basic helix-loop-helix family, member e40 -0.0129989
RPS5 ribosomal protein S5 -0.0129432
CTSD cathepsin D -0.0127256
CHMP2B charged multivesicular body protein 2B -0.0126467
SREK1IP1 SREK1-interacting protein 1 -0.012645
UBE2D3 ubiquitin-conjugating enzyme E2D 3 -0.0125957
PLAUR plasminogen activator, urokinase receptor -0.0125918
RPS8 ribosomal protein S8 -0.0125094
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 -0.0124298
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0123959
NPEPPS aminopeptidase puromycin sensitive -0.0123282
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) -0.012258
SEMA3B sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B -0.0122143
RPL9 ribosomal protein L9 -0.0121305
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 -0.012073