vesicle-mediated transport Gene Set

Dataset GO Biological Process Annotations 2023
Category structural or functional annotations
Type biological process
Description A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane. (Gene Ontology, GO_0016192)
External Link http://amigo.geneontology.org/amigo/term/GO_0016192
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Genes

412 genes participating in the vesicle-mediated transport biological process from the curated GO Biological Process Annotations 2023 dataset.

Symbol Name
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1
ACTR1A ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)
ADRB2 adrenoceptor beta 2, surface
AGAP2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 2
AHI1 Abelson helper integration site 1
AKTIP AKT interacting protein
ALMS1 Alstrom syndrome protein 1
ALS2 amyotrophic lateral sclerosis 2 (juvenile)
ALS2CL ALS2 C-terminal like
ALS2CR11 amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 11
AMPH amphiphysin
ANK1 ankyrin 1, erythrocytic
ANKFY1 ankyrin repeat and FYVE domain containing 1
ANXA2 annexin A2
ANXA8 annexin A8
ANXA8L1 annexin A8-like 1
AP1B1 adaptor-related protein complex 1, beta 1 subunit
AP1G1 adaptor-related protein complex 1, gamma 1 subunit
AP1G2 adaptor-related protein complex 1, gamma 2 subunit
AP1M1 adaptor-related protein complex 1, mu 1 subunit
AP1M2 adaptor-related protein complex 1, mu 2 subunit
AP1S1 adaptor-related protein complex 1, sigma 1 subunit
AP1S2 adaptor-related protein complex 1, sigma 2 subunit
AP1S3 adaptor-related protein complex 1, sigma 3 subunit
AP2A1 adaptor-related protein complex 2, alpha 1 subunit
AP2A2 adaptor-related protein complex 2, alpha 2 subunit
AP2B1 adaptor-related protein complex 2, beta 1 subunit
AP2M1 adaptor-related protein complex 2, mu 1 subunit
AP2S1 adaptor-related protein complex 2, sigma 1 subunit
AP3B1 adaptor-related protein complex 3, beta 1 subunit
AP3B2 adaptor-related protein complex 3, beta 2 subunit
AP3D1 adaptor-related protein complex 3, delta 1 subunit
AP3M1 adaptor-related protein complex 3, mu 1 subunit
AP3M2 adaptor-related protein complex 3, mu 2 subunit
AP3S1 adaptor-related protein complex 3, sigma 1 subunit
AP3S2 adaptor-related protein complex 3, sigma 2 subunit
AP4B1 adaptor-related protein complex 4, beta 1 subunit
AP4E1 adaptor-related protein complex 4, epsilon 1 subunit
AP4M1 adaptor-related protein complex 4, mu 1 subunit
AP4S1 adaptor-related protein complex 4, sigma 1 subunit
AP5B1 adaptor-related protein complex 5, beta 1 subunit
AP5M1 adaptor-related protein complex 5, mu 1 subunit
AP5S1 adaptor-related protein complex 5, sigma 1 subunit
AP5Z1 adaptor-related protein complex 5, zeta 1 subunit
APP amyloid beta (A4) precursor protein
ARAP3 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3
ARF1 ADP-ribosylation factor 1
ARF3 ADP-ribosylation factor 3
ARF4 ADP-ribosylation factor 4
ARF5 ADP-ribosylation factor 5
ARF6 ADP-ribosylation factor 6
ARFGAP3 ADP-ribosylation factor GTPase activating protein 3
ARFGEF1 ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited)
ARHGAP1 Rho GTPase activating protein 1
ARL1 ADP-ribosylation factor-like 1
ARL11 ADP-ribosylation factor-like 11
ARL14 ADP-ribosylation factor-like 14
ARL17A ADP-ribosylation factor-like 17A
ARL4A ADP-ribosylation factor-like 4A
ARL4D ADP-ribosylation factor-like 4D
ARL5A ADP-ribosylation factor-like 5A
ARL5B ADP-ribosylation factor-like 5B
ARL5C ADP-ribosylation factor-like 5C
ARL6 ADP-ribosylation factor-like 6
ATG14 autophagy related 14
ATP6V1H ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H
ATP9A ATPase, class II, type 9A
ATP9B ATPase, class II, type 9B
BECN1 beclin 1, autophagy related
BECN2 beclin 2
BIN1 bridging integrator 1
BIN3 bridging integrator 3
BLOC1S1 biogenesis of lysosomal organelles complex-1, subunit 1
BLOC1S2 biogenesis of lysosomal organelles complex-1, subunit 2
BVES blood vessel epicardial substance
C9ORF72 chromosome 9 open reading frame 72
CACFD1 calcium channel flower domain containing 1
CADPS Ca++-dependent secretion activator
CADPS2 Ca++-dependent secretion activator 2
CALY calcyon neuron-specific vesicular protein
CAV2 caveolin 2
CAV3 caveolin 3
CCL14 chemokine (C-C motif) ligand 14
CCL3 chemokine (C-C motif) ligand 3
CCL5 chemokine (C-C motif) ligand 5
CCL8 chemokine (C-C motif) ligand 8
CCR1 chemokine (C-C motif) receptor 1
CCZ1 CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)
CCZ1B CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)
CDC42 cell division cycle 42
CDK16 cyclin-dependent kinase 16
CECR2 cat eye syndrome chromosome region, candidate 2
CEP83 centrosomal protein 83kDa
CHM choroideremia (Rab escort protein 1)
CHML choroideremia-like (Rab escort protein 2)
CHMP1A charged multivesicular body protein 1A
CHMP1B charged multivesicular body protein 1B
CHMP2A charged multivesicular body protein 2A
CHMP2B charged multivesicular body protein 2B
CHMP3 charged multivesicular body protein 3
CHMP4A charged multivesicular body protein 4A
CHMP4BP1 charged multivesicular body protein 4B pseudogene 1
CHMP4C charged multivesicular body protein 4C
CHMP5 charged multivesicular body protein 5
CHMP6 charged multivesicular body protein 6
CHMP7 charged multivesicular body protein 7
CLEC16A C-type lectin domain family 16, member A
CLINT1 clathrin interactor 1
COMMD1 copper metabolism (Murr1) domain containing 1
CORO1C coronin, actin binding protein, 1C
CPLX1 complexin 1
CPNE1 copine I
CSNK1D casein kinase 1, delta
CSNK1E casein kinase 1, epsilon
CSNK1G1 casein kinase 1, gamma 1
CSNK1G2 casein kinase 1, gamma 2
CSNK1G3 casein kinase 1, gamma 3
CTAGE1 cutaneous T-cell lymphoma-associated antigen 1
CTAGE15 CTAGE family, member 15
CTAGE4 CTAGE family, member 4
CTAGE5 CTAGE family, member 5
CTAGE6 CTAGE family, member 6
CTAGE8 CTAGE family, member 8
CTAGE9 CTAGE family, member 9
CYTH1 cytohesin 1
CYTH2 cytohesin 2
CYTH3 cytohesin 3
DCLK1 doublecortin-like kinase 1
DEFA6 defensin, alpha 6, Paneth cell-specific
DENND1A DENN/MADD domain containing 1A
DENND1B DENN/MADD domain containing 1B
DENND1C DENN/MADD domain containing 1C
DENND3 DENN/MADD domain containing 3
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5
DNER delta/notch-like EGF repeat containing
DNM1 dynamin 1
DNM2 dynamin 2
DNM3 dynamin 3
DOC2A double C2-like domains, alpha
DOC2B double C2-like domains, beta
DPY30 dpy-30 homolog (C. elegans)
DPYSL2 dihydropyrimidinase-like 2
DTX3L deltex 3 like, E3 ubiquitin ligase
EEA1 early endosome antigen 1
EHD1 EH-domain containing 1
EHD2 EH-domain containing 2
EHD3 EH-domain containing 3
EHD4 EH-domain containing 4
ENTHD1 ENTH domain containing 1
EPG5 ectopic P-granules autophagy protein 5 homolog (C. elegans)
EPN1 epsin 1
EPN2 epsin 2
EPN3 epsin 3
EPS15 epidermal growth factor receptor pathway substrate 15
EPS15L1 epidermal growth factor receptor pathway substrate 15-like 1
EQTN equatorin, sperm acrosome associated
EXOC2 exocyst complex component 2
EXOC3 exocyst complex component 3
EXOC3L1 exocyst complex component 3-like 1
EXOC3L4 exocyst complex component 3-like 4
EXOC4 exocyst complex component 4
EXOC5 exocyst complex component 5
EXOC6 exocyst complex component 6
EXOC6B exocyst complex component 6B
EXOC7 exocyst complex component 7
EXOC8 exocyst complex component 8
EXPH5 exophilin 5
FAM160A2 family with sequence similarity 160, member A2
FMN2 formin 2
FNBP1L formin binding protein 1-like
GDI1 GDP dissociation inhibitor 1
GDI2 GDP dissociation inhibitor 2
GOLGA4 golgin A4
GOLGA5 golgin A5
GOSR1 golgi SNAP receptor complex member 1
GOSR2 golgi SNAP receptor complex member 2
GPRASP1 G protein-coupled receptor associated sorting protein 1
HEATR5A HEAT repeat containing 5A
HEATR5B HEAT repeat containing 5B
HGS hepatocyte growth factor-regulated tyrosine kinase substrate
HIP1 huntingtin interacting protein 1
HIP1R huntingtin interacting protein 1 related
HMGXB4 HMG box domain containing 4
HMP19 HMP19 protein
HOOK1 hook microtubule-tethering protein 1
HOOK2 hook microtubule-tethering protein 2
HOOK3 hook microtubule-tethering protein 3
IFT27 intraflagellar transport 27
INPPL1 inositol polyphosphate phosphatase-like 1
IRAG2 inositol 1,4,5-triphosphate receptor associated 2
ITSN1 intersectin 1 (SH3 domain protein)
ITSN2 intersectin 2
JAGN1 jagunal homolog 1 (Drosophila)
KALRN kalirin, RhoGEF kinase
KIAA1109 KIAA1109
KIF13A kinesin family member 13A
KIF1A kinesin family member 1A
KIF1B kinesin family member 1B
KIF1C kinesin family member 1C
KIF5A kinesin family member 5A
KXD1 KxDL motif containing 1
LAMTOR1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 1
LDLR low density lipoprotein receptor
LOC107984156 ADP-ribosylation factor-like protein 17
LRP12 low density lipoprotein receptor-related protein 12
LRP2 low density lipoprotein receptor-related protein 2
LRP8 low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
LRRC7 leucine rich repeat containing 7
LRRK2 leucine-rich repeat kinase 2
M6PR mannose-6-phosphate receptor (cation dependent)
MAPK8IP1 mitogen-activated protein kinase 8 interacting protein 1
MAPK8IP3 mitogen-activated protein kinase 8 interacting protein 3
MGRN1 mahogunin ring finger 1, E3 ubiquitin protein ligase
MIA3 melanoma inhibitory activity family, member 3
MIB1 mindbomb E3 ubiquitin protein ligase 1
MICALL1 MICAL-like 1
MITD1 MIT, microtubule interacting and transport, domain containing 1
MTM1 myotubularin 1
MYCBPAP MYCBP associated protein
MYL1 myosin, light chain 1, alkali; skeletal, fast
MYO1E myosin IE
MYO5A myosin VA (heavy chain 12, myoxin)
MYO5B myosin VB
MYO6 myosin VI
NAPA N-ethylmaleimide-sensitive factor attachment protein, alpha
NCALD neurocalcin delta
NCKIPSD NCK interacting protein with SH3 domain
NECAP1 NECAP endocytosis associated 1
NECAP2 NECAP endocytosis associated 2
NLRP5 NLR family, pyrin domain containing 5
NSF N-ethylmaleimide-sensitive factor
NSG1 neuron specific gene family member 1
OCIAD1 OCIA domain containing 1
OCIAD2 OCIA domain containing 2
OSBPL1A oxysterol binding protein-like 1A
PICALM phosphatidylinositol binding clathrin assembly protein
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha
PIK3C3 phosphatidylinositol 3-kinase, catalytic subunit type 3
PIK3R4 phosphoinositide-3-kinase, regulatory subunit 4
PIP4K2A phosphatidylinositol-5-phosphate 4-kinase, type II, alpha
PLEKHF1 pleckstrin homology domain containing, family F (with FYVE domain) member 1
PLEKHF2 pleckstrin homology domain containing, family F (with FYVE domain) member 2
PLIN3 perilipin 3
PRKCI protein kinase C, iota
PRKD1 protein kinase D1
PRSS12 protease, serine, 12 (neurotrypsin, motopsin)
PXK PX domain containing serine/threonine kinase
RAB10 RAB10, member RAS oncogene family
RAB11A RAB11A, member RAS oncogene family
RAB11FIP3 RAB11 family interacting protein 3 (class II)
RAB12 RAB12, member RAS oncogene family
RAB13 RAB13, member RAS oncogene family
RAB14 RAB14, member RAS oncogene family
RAB17 RAB17, member RAS oncogene family
RAB1A RAB1A, member RAS oncogene family
RAB22A RAB22A, member RAS oncogene family
RAB25 RAB25, member RAS oncogene family
RAB27A RAB27A, member RAS oncogene family
RAB27B RAB27B, member RAS oncogene family
RAB2A RAB2A, member RAS oncogene family
RAB2B RAB2B, member RAS oncogene family
RAB30 RAB30, member RAS oncogene family
RAB34 RAB34, member RAS oncogene family
RAB35 RAB35, member RAS oncogene family
RAB36 RAB36, member RAS oncogene family
RAB39A RAB39A, member RAS oncogene family
RAB39B RAB39B, member RAS oncogene family
RAB3A RAB3A, member RAS oncogene family
RAB3IL1 RAB3A interacting protein (rabin3)-like 1
RAB3IP RAB3A interacting protein
RAB43 RAB43, member RAS oncogene family
RAB44 RAB44, member RAS oncogene family
RAB4A RAB4A, member RAS oncogene family
RAB4B RAB4B, member RAS oncogene family
RAB5A RAB5A, member RAS oncogene family
RAB5B RAB5B, member RAS oncogene family
RAB5C RAB5C, member RAS oncogene family
RAB7A RAB7A, member RAS oncogene family
RAB7B RAB7B, member RAS oncogene family
RABEP1 rabaptin, RAB GTPase binding effector protein 1
RALBP1 ralA binding protein 1
RASEF RAS and EF-hand domain containing
RASSF9 Ras association (RalGDS/AF-6) domain family (N-terminal) member 9
RBSN rabenosyn, RAB effector
REPS1 RALBP1 associated Eps domain containing 1
REPS2 RALBP1 associated Eps domain containing 2
RHOB ras homolog family member B
RHOBTB1 Rho-related BTB domain containing 1
RHOBTB2 Rho-related BTB domain containing 2
RHOJ ras homolog family member J
RHOQ ras homolog family member Q
RHOU ras homolog family member U
RHOV ras homolog family member V
RILP Rab interacting lysosomal protein
RIN3 Ras and Rab interactor 3
RINL Ras and Rab interactor-like
RPH3A rabphilin 3A
RPH3AL rabphilin 3A-like (without C2 domains)
RUBCN rubicon autophagy regulator
S100A10 S100 calcium binding protein A10
SCARA5 scavenger receptor class A, member 5
SCFD2 sec1 family domain containing 2
SCRIB scribbled planar cell polarity protein
SCRN1 secernin 1
SEPTIN9 septin 9
SGSM3 small G protein signaling modulator 3
SLC10A7 solute carrier family 10, member 7
SNAP23 synaptosomal-associated protein, 23kDa
SNAP25 synaptosomal-associated protein, 25kDa
SNAP29 synaptosomal-associated protein, 29kDa
SNAP47 synaptosomal-associated protein, 47kDa
SNAPIN SNAP-associated protein
SNF8 SNF8, ESCRT-II complex subunit
SNX16 sorting nexin 16
SNX17 sorting nexin 17
SNX18 sorting nexin 18
SNX27 sorting nexin family member 27
SNX33 sorting nexin 33
SNX9 sorting nexin 9
SORT1 sortilin 1
SPAG9 sperm associated antigen 9
SPIRE1 spire-type actin nucleation factor 1
SPIRE2 spire-type actin nucleation factor 2
SPTBN2 spectrin, beta, non-erythrocytic 2
SPTBN4 spectrin, beta, non-erythrocytic 4
SQSTM1 sequestosome 1
STAB2 stabilin 2
STEAP2 STEAP family member 2, metalloreductase
STX10 syntaxin 10
STX11 syntaxin 11
STX12 syntaxin 12
STX16 syntaxin 16
STX17 syntaxin 17
STX19 syntaxin 19
STX1A syntaxin 1A (brain)
STX1B syntaxin 1B
STX2 syntaxin 2
STX3 syntaxin 3
STX4 syntaxin 4
STX5 syntaxin 5
STX6 syntaxin 6
STX7 syntaxin 7
STX8 syntaxin 8
STXBP1 syntaxin binding protein 1
STXBP2 syntaxin binding protein 2
STXBP3 syntaxin binding protein 3
SYP synaptophysin
SYT11 synaptotagmin XI
SYT4 synaptotagmin IV
SYT7 synaptotagmin VII
SYTL1 synaptotagmin-like 1
SYTL2 synaptotagmin-like 2
SYTL3 synaptotagmin-like 3
SYTL4 synaptotagmin-like 4
SYTL5 synaptotagmin-like 5
TBC1D23 TBC1 domain family, member 23
TBC1D2B TBC1 domain family, member 2B
TBC1D4 TBC1 domain family, member 4
TBC1D8B TBC1 domain family, member 8B (with GRAM domain)
TGFBRAP1 transforming growth factor, beta receptor associated protein 1
TINAGL1 tubulointerstitial nephritis antigen-like 1
TMCC1 transmembrane and coiled-coil domain family 1
TMED10 transmembrane emp24-like trafficking protein 10 (yeast)
TMED2 transmembrane emp24 domain trafficking protein 2
TNFAIP2 tumor necrosis factor, alpha-induced protein 2
TOM1 target of myb1 (chicken)
TRAK1 trafficking protein, kinesin binding 1
TRIM23 tripartite motif containing 23
TSC2 tuberous sclerosis 2
TSG101 tumor susceptibility 101
TSNARE1 t-SNARE domain containing 1
TVP23A trans-golgi network vesicle protein 23 homolog A (S. cerevisiae)
TVP23B trans-golgi network vesicle protein 23 homolog B (S. cerevisiae)
TVP23C trans-golgi network vesicle protein 23 homolog C (S. cerevisiae)
UEVLD UEV and lactate/malate dehyrogenase domains
USP6NL USP6 N-terminal like
UVRAG UV radiation resistance associated
VAMP1 vesicle-associated membrane protein 1 (synaptobrevin 1)
VAMP2 vesicle-associated membrane protein 2 (synaptobrevin 2)
VAMP3 vesicle-associated membrane protein 3
VAMP7 vesicle-associated membrane protein 7
VAMP8 vesicle-associated membrane protein 8
VIPAS39 VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog
VPS11 vacuolar protein sorting 11 homolog (S. cerevisiae)
VPS13B vacuolar protein sorting 13 homolog B (yeast)
VPS16 vacuolar protein sorting 16 homolog (S. cerevisiae)
VPS18 vacuolar protein sorting 18 homolog (S. cerevisiae)
VPS33A vacuolar protein sorting 33 homolog A (S. cerevisiae)
VPS33B vacuolar protein sorting 33 homolog B (yeast)
VPS39 vacuolar protein sorting 39 homolog (S. cerevisiae)
VPS41 vacuolar protein sorting 41 homolog (S. cerevisiae)
VPS45 vacuolar protein sorting 45 homolog (S. cerevisiae)
VPS4A vacuolar protein sorting 4 homolog A (S. cerevisiae)
VPS4B vacuolar protein sorting 4 homolog B (S. cerevisiae)
VPS51 vacuolar protein sorting 51 homolog (S. cerevisiae)
VTA1 vesicle (multivesicular body) trafficking 1
VTI1B vesicle transport through interaction with t-SNAREs 1B
WASH1 WAS protein family homolog 1
WASH2P WAS protein family homolog 2 pseudogene
WASH3P WAS protein family homolog 3 pseudogene
WASH4P WAS protein family homolog 4 pseudogene
WASH6P WAS protein family homolog 6 pseudogene
WASHC2A WASH complex subunit 2A
WASHC2C WASH complex subunit 2C
WASHC3 WASH complex subunit 3
WASHC4 WASH complex subunit 4
WASHC5 WASH complex subunit 5
WASL Wiskott-Aldrich syndrome-like
WIPF3 WAS/WASL interacting protein family, member 3
ZFYVE16 zinc finger, FYVE domain containing 16
ZFYVE27 zinc finger, FYVE domain containing 27
ZFYVE9 zinc finger, FYVE domain containing 9