vincristine_SW 1271 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description vincristine perturbation in SW 1271 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the vincristine_SW 1271 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
LDHA lactate dehydrogenase A 0.148753
TMSB10 thymosin beta 10 0.130198
AKAP12 A kinase (PRKA) anchor protein 12 0.124338
PALM2AKAP2 PALM2 and AKAP2 fusion 0.120389
CD44 CD44 molecule (Indian blood group) 0.120095
TRIO trio Rho guanine nucleotide exchange factor 0.0886073
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0849759
POTEF POTE ankyrin domain family, member F 0.0768172
ENO1 enolase 1, (alpha) 0.0766039
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0759221
APLP2 amyloid beta (A4) precursor-like protein 2 0.0744723
PKM pyruvate kinase, muscle 0.0728791
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0716836
NAP1L1 nucleosome assembly protein 1-like 1 0.0706812
ERRFI1 ERBB receptor feedback inhibitor 1 0.069971
ANGPTL4 angiopoietin-like 4 0.0692151
MACF1 microtubule-actin crosslinking factor 1 0.0666348
MAP1B microtubule-associated protein 1B 0.0660354
MT2A metallothionein 2A 0.0636166
NT5E 5'-nucleotidase, ecto (CD73) 0.063086
DTNA dystrobrevin, alpha 0.0627585
MSN moesin 0.0617125
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0615317
SAMD4A sterile alpha motif domain containing 4A 0.0602019
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0596615
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0587548
SQSTM1 sequestosome 1 0.0582893
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.058148
MCL1 myeloid cell leukemia 1 0.0580979
SET SET nuclear proto-oncogene 0.0566111
SRRM2 serine/arginine repetitive matrix 2 0.0565511
UGCG UDP-glucose ceramide glucosyltransferase 0.0564921
SDC4 syndecan 4 0.0559478
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0558087
EXT1 exostosin glycosyltransferase 1 0.0554276
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0550044
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.054699
CPNE1 copine I 0.0544606
ZSWIM6 zinc finger, SWIM-type containing 6 0.0538183
BIRC3 baculoviral IAP repeat containing 3 0.0521535
ITGA6 integrin, alpha 6 0.0520526
CANX calnexin 0.051145
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0511268
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0506904
HDAC9 histone deacetylase 9 0.050175
TIMP1 TIMP metallopeptidase inhibitor 1 0.0499097
ASPH aspartate beta-hydroxylase 0.0480975
IGFBP3 insulin-like growth factor binding protein 3 0.0480323
AHNAK AHNAK nucleoprotein 0.0480184
AKAP9 A kinase (PRKA) anchor protein 9 0.0478462
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0468756
PCBP2 poly(rC) binding protein 2 0.0467422
RPL23 ribosomal protein L23 0.0462685
FMNL2 formin-like 2 0.0461615
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0456703
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0452321
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta 0.0445297
EGFR epidermal growth factor receptor 0.0441941
SMAD3 SMAD family member 3 0.0434177
LIMA1 LIM domain and actin binding 1 0.0429685
FLNA filamin A, alpha 0.0429225
MYH9 myosin, heavy chain 9, non-muscle 0.0425434
KTN1 kinectin 1 (kinesin receptor) 0.0423339
SH3KBP1 SH3-domain kinase binding protein 1 0.0422989
INTS6 integrator complex subunit 6 0.0409511
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.040928
RPS17 ribosomal protein S17 0.040681
N4BP2L2 NEDD4 binding protein 2-like 2 0.0398377
CAVIN1 caveolae associated protein 1 0.03957
TPI1 triosephosphate isomerase 1 0.039221
DST dystonin 0.0391788
SETD5 SET domain containing 5 0.0391683
MYO10 myosin X 0.0389318
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.038856
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.0385942
EIF2S2 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa 0.0381594
SLC38A2 solute carrier family 38, member 2 0.0379469
PTMA prothymosin, alpha 0.0376375
VIM vimentin 0.0375706
UTRN utrophin 0.0368699
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0363303
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0353938
GNAS GNAS complex locus 0.035102
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 0.0341165
SPATS2L spermatogenesis associated, serine-rich 2-like 0.0340048
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0338098
DEK DEK proto-oncogene 0.0337177
ANXA2 annexin A2 0.0336152
CALR calreticulin 0.0335536
PRRC2B proline-rich coiled-coil 2B 0.0335126
ACTG1 actin gamma 1 0.0332688
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0332418
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 0.0330108
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0329898
CCND1 cyclin D1 0.0329326
KMT2C lysine (K)-specific methyltransferase 2C 0.0326501
RPLP1 ribosomal protein, large, P1 0.0322002
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 0.0314033
FRMD6 FERM domain containing 6 0.0312794
PRSS23 protease, serine, 23 0.0311689

decreased expression

Symbol Name Standardized Value
ANKRD28 ankyrin repeat domain 28 -0.0562434
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0519166
TAS2R14 taste receptor, type 2, member 14 -0.0507543
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0503236
NF1 neurofibromin 1 -0.0501432
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0447067
RBM39 RNA binding motif protein 39 -0.0407201
ATM ATM serine/threonine kinase -0.0401665
OSMR oncostatin M receptor -0.0366357
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0362701
SMYD3 SET and MYND domain containing 3 -0.0358397
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0355876
VCL vinculin -0.0353491
ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase -0.0348106
DLG1 discs, large homolog 1 (Drosophila) -0.034523
MBNL1 muscleblind-like splicing regulator 1 -0.0343052
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 -0.0339805
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0318472
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0315378
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) -0.0309781
SGO2 shugoshin 2 -0.0288786
RAD21 RAD21 homolog (S. pombe) -0.0285012
PIAS1 protein inhibitor of activated STAT, 1 -0.0273192
NAMPT nicotinamide phosphoribosyltransferase -0.0271982
PUM2 pumilio RNA-binding family member 2 -0.026968
TCERG1 transcription elongation regulator 1 -0.026827
CCNB2 cyclin B2 -0.026627
ELL2 elongation factor, RNA polymerase II, 2 -0.026581
CENPF centromere protein F, 350/400kDa -0.0263994
EFNA5 ephrin-A5 -0.0258183
GPHN gephyrin -0.0257941
ZFAND6 zinc finger, AN1-type domain 6 -0.0255754
HP1BP3 heterochromatin protein 1, binding protein 3 -0.0252849
TPX2 TPX2, microtubule-associated -0.025184
RPRD1B regulation of nuclear pre-mRNA domain containing 1B -0.0249179
KIF4A kinesin family member 4A -0.0241956
MBD5 methyl-CpG binding domain protein 5 -0.0241237
HJURP Holliday junction recognition protein -0.0240777
BRAF B-Raf proto-oncogene, serine/threonine kinase -0.0239983
PHF14 PHD finger protein 14 -0.0235683
RAD18 RAD18 E3 ubiquitin protein ligase -0.0232339
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.0230287
KIAA1328 KIAA1328 -0.0229079
NALCN sodium leak channel, non selective -0.0228551
RSRC1 arginine/serine-rich coiled-coil 1 -0.0228337
ANO10 anoctamin 10 -0.0226901
LMAN1 lectin, mannose-binding, 1 -0.0223304
CTNND1 catenin (cadherin-associated protein), delta 1 -0.0222542
ABI2 abl-interactor 2 -0.0222237
PSMD5 proteasome (prosome, macropain) 26S subunit, non-ATPase, 5 -0.0220528
NKTR natural killer cell triggering receptor -0.0219291
ATF7IP activating transcription factor 7 interacting protein -0.0215579
PTBP3 polypyrimidine tract binding protein 3 -0.0215318
RSU1 Ras suppressor protein 1 -0.0214342
KPNB1 karyopherin (importin) beta 1 -0.021297
NCOR1 nuclear receptor corepressor 1 -0.0212213
CUX1 cut-like homeobox 1 -0.021051
NXN nucleoredoxin -0.0210483
KIF13A kinesin family member 13A -0.0210465
KIF18B kinesin family member 18B -0.0210088
PHIP pleckstrin homology domain interacting protein -0.0209422
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0208809
STRN striatin, calmodulin binding protein -0.020852
BCAR3 breast cancer anti-estrogen resistance 3 -0.0208425
PPP2R5E protein phosphatase 2, regulatory subunit B', epsilon isoform -0.0208079
ZC3H12C zinc finger CCCH-type containing 12C -0.0207491
TUBB tubulin, beta class I -0.0207083
PDSS2 prenyl (decaprenyl) diphosphate synthase, subunit 2 -0.0206145
HIBADH 3-hydroxyisobutyrate dehydrogenase -0.0205822
PCNX1 pecanex 1 -0.0205785
POT1 protection of telomeres 1 -0.0205225
LOC112694756 uncharaterized LOC112694756 -0.0203208
TUBA1C tubulin, alpha 1c -0.0201713
EXOC6B exocyst complex component 6B -0.0198635
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0198609
PREPL prolyl endopeptidase-like -0.0198588
R3HDM1 R3H domain containing 1 -0.0197399
GOLT1B golgi transport 1B -0.019664
IGF1R insulin-like growth factor 1 receptor -0.019651
RCOR1 REST corepressor 1 -0.0195707
SKP1 S-phase kinase-associated protein 1 -0.0194555
GPC6 glypican 6 -0.0193698
CLASP2 cytoplasmic linker associated protein 2 -0.0193124
PPP2R5C protein phosphatase 2, regulatory subunit B', gamma -0.0191693
GCC2 GRIP and coiled-coil domain containing 2 -0.0190489
SENP5 SUMO1/sentrin specific peptidase 5 -0.0189659
CDKAL1 CDK5 regulatory subunit associated protein 1-like 1 -0.018939
TOP2B topoisomerase (DNA) II beta 180kDa -0.0187504
MNAT1 MNAT CDK-activating kinase assembly factor 1 -0.0187464
ZNF33A zinc finger protein 33A -0.0187252
DHX29 DEAH (Asp-Glu-Ala-His) box polypeptide 29 -0.0186989
MARCHF6 membrane associated ring-CH-type finger 6 -0.0185392
MAPKAP1 mitogen-activated protein kinase associated protein 1 -0.0185093
USP15 ubiquitin specific peptidase 15 -0.0184442
ZNF680 zinc finger protein 680 -0.0183658
GLG1 golgi glycoprotein 1 -0.0183592
YTHDC2 YTH domain containing 2 -0.0183534
WDR26 WD repeat domain 26 -0.0183026
CAPRIN1 cell cycle associated protein 1 -0.0182302
CEP95 centrosomal protein 95kDa -0.0181056