vincristine_SW 900 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description vincristine perturbation in SW 900 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the vincristine_SW 900 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 0.12421
TRIO trio Rho guanine nucleotide exchange factor 0.109725
CXCL8 chemokine (C-X-C motif) ligand 8 0.0938597
ERRFI1 ERBB receptor feedback inhibitor 1 0.077602
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0747734
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0732979
SAMD4A sterile alpha motif domain containing 4A 0.0556522
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) 0.0534388
STC2 stanniocalcin 2 0.0512215
CANX calnexin 0.0504436
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0500266
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.04885
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0453598
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0450011
RASAL2 RAS protein activator like 2 0.0410157
MAP1B microtubule-associated protein 1B 0.0405384
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0370743
ASPH aspartate beta-hydroxylase 0.0364014
MYOF myoferlin 0.0351759
ZSWIM6 zinc finger, SWIM-type containing 6 0.0350168
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 0.0345235
GRB10 growth factor receptor-bound protein 10 0.0340402
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0326938
FLNA filamin A, alpha 0.0318862
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0318454
LOXL2 lysyl oxidase-like 2 0.0314594
APLP2 amyloid beta (A4) precursor-like protein 2 0.0305334
EGFR epidermal growth factor receptor 0.0301271
FAT1 FAT atypical cadherin 1 0.0293557
S100A10 S100 calcium binding protein A10 0.0285646
SLC35F3 solute carrier family 35, member F3 0.0285512
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0284292
SMAD3 SMAD family member 3 0.0273001
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.026842
NT5E 5'-nucleotidase, ecto (CD73) 0.0253537
DST dystonin 0.0245473
PRSS23 protease, serine, 23 0.0244619
CAPN2 calpain 2, (m/II) large subunit 0.023951
FRMD6 FERM domain containing 6 0.0237777
AHNAK AHNAK nucleoprotein 0.0233604
TPM3 tropomyosin 3 0.0226864
ACTG1 actin gamma 1 0.0221804
FAM13A family with sequence similarity 13, member A 0.0221294
ERBIN erbb2 interacting protein 0.0217587
PLEC plectin 0.0213754
MYH9 myosin, heavy chain 9, non-muscle 0.0206684
RUNX1 runt-related transcription factor 1 0.0204664
BASP1 brain abundant, membrane attached signal protein 1 0.0204638
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0204271
HSPA8 heat shock 70kDa protein 8 0.0203213
NFE2L1 nuclear factor, erythroid 2-like 1 0.0201719
AKAP13 A kinase (PRKA) anchor protein 13 0.0201596
LIMCH1 LIM and calponin homology domains 1 0.0201303
RPL3 ribosomal protein L3 0.0200794
TMEM156 transmembrane protein 156 0.0198002
MCL1 myeloid cell leukemia 1 0.0191575
FAM107B family with sequence similarity 107, member B 0.0191328
CTBP2 C-terminal binding protein 2 0.0190889
CREB5 cAMP responsive element binding protein 5 0.0189518
MITF microphthalmia-associated transcription factor 0.0189338
LYST lysosomal trafficking regulator 0.0184932
DDAH1 dimethylarginine dimethylaminohydrolase 1 0.0184889
CSGALNACT2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 0.0182712
DOCK5 dedicator of cytokinesis 5 0.0181672
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0180507
CCND1 cyclin D1 0.0180487
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 0.0176163
PSD3 pleckstrin and Sec7 domain containing 3 0.0175952
ATXN1 ataxin 1 0.0172661
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0171894
AHNAK2 AHNAK nucleoprotein 2 0.0169204
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric 0.0168777
MRPS6 mitochondrial ribosomal protein S6 0.0164715
DTNA dystrobrevin, alpha 0.0160911
POTEF POTE ankyrin domain family, member F 0.0160835
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.0160096
MANF mesencephalic astrocyte-derived neurotrophic factor 0.0159611
FLNB filamin B, beta 0.0158909
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.015828
STK10 serine/threonine kinase 10 0.0157534
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0157001
QSOX1 quiescin Q6 sulfhydryl oxidase 1 0.015596
THSD4 thrombospondin, type I, domain containing 4 0.0152561
GPR39 G protein-coupled receptor 39 0.0151565
MACF1 microtubule-actin crosslinking factor 1 0.0150403
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0148417
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0147588
HYOU1 hypoxia up-regulated 1 0.0146079
INTS6 integrator complex subunit 6 0.014539
PDIA4 protein disulfide isomerase family A, member 4 0.0143102
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0141093
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.014102
FOSL1 FOS-like antigen 1 0.0139002
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0138724
ANTXR2 anthrax toxin receptor 2 0.0136511
HMGA2 high mobility group AT-hook 2 0.0136221
APP amyloid beta (A4) precursor protein 0.0136124
UHMK1 U2AF homology motif (UHM) kinase 1 0.0135988
NALF1 NALCN channel auxiliary factor 1 0.0134662
RND3 Rho family GTPase 3 0.0134618

decreased expression

Symbol Name Standardized Value
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.298358
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) -0.277221
FN1 fibronectin 1 -0.164755
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.133519
NRG1 neuregulin 1 -0.112936
PTMA prothymosin, alpha -0.0905051
TMSB10 thymosin beta 10 -0.0687913
GLIS3 GLIS family zinc finger 3 -0.0649722
NAMPT nicotinamide phosphoribosyltransferase -0.0546907
FTL ferritin, light polypeptide -0.0465537
ITGA1 integrin, alpha 1 -0.0455761
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0421723
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0416921
TPR translocated promoter region, nuclear basket protein -0.0414772
RUNX2 runt-related transcription factor 2 -0.035556
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0336278
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0333948
ETV6 ets variant 6 -0.0331907
ETV1 ets variant 1 -0.0328952
AHR aryl hydrocarbon receptor -0.0314803
NRP1 neuropilin 1 -0.0314237
IFI27 interferon, alpha-inducible protein 27 -0.0310338
LOC102724023 ES1 protein homolog, mitochondrial -0.0303626
MBD5 methyl-CpG binding domain protein 5 -0.0303422
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.029712
SMOX spermine oxidase -0.0289918
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0287329
HMGB3 high mobility group box 3 -0.027282
DPYD dihydropyrimidine dehydrogenase -0.0271839
HLA-B major histocompatibility complex, class I, B -0.0269478
RPS21 ribosomal protein S21 -0.0269359
RPL31 ribosomal protein L31 -0.0264792
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) -0.0246112
SEC31A SEC31 homolog A (S. cerevisiae) -0.0241965
PUM2 pumilio RNA-binding family member 2 -0.024021
RPS6 ribosomal protein S6 -0.0239687
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 -0.0237886
CD44 CD44 molecule (Indian blood group) -0.0237874
SOS1 son of sevenless homolog 1 (Drosophila) -0.0237598
VMP1 vacuole membrane protein 1 -0.023679
RPL35A ribosomal protein L35a -0.0236443
VIM vimentin -0.0235052
UBE2K ubiquitin-conjugating enzyme E2K -0.0230539
B2M beta-2-microglobulin -0.0227609
AOPEP aminopeptidase O (putative) -0.0220952
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0220047
S100A6 S100 calcium binding protein A6 -0.021996
SQSTM1 sequestosome 1 -0.0219676
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0219436
TUBB4B tubulin, beta 4B class IVb -0.021704
AHRR aryl-hydrocarbon receptor repressor -0.0215086
SOD2 superoxide dismutase 2, mitochondrial -0.0214592
NPEPPS aminopeptidase puromycin sensitive -0.0213905
ARF4 ADP-ribosylation factor 4 -0.0213583
BIRC6 baculoviral IAP repeat containing 6 -0.0213246
USP34 ubiquitin specific peptidase 34 -0.0210874
PGK1 phosphoglycerate kinase 1 -0.0208609
ADD3 adducin 3 (gamma) -0.0207821
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0204436
RPL11 ribosomal protein L11 -0.0201786
SOX4 SRY (sex determining region Y)-box 4 -0.0199688
PDE4D phosphodiesterase 4D, cAMP-specific -0.0199192
TM9SF3 transmembrane 9 superfamily member 3 -0.0198724
SYT1 synaptotagmin I -0.0198545
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0198332
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0198285
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0195799
RPL37A ribosomal protein L37a -0.0194878
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0192012
RPS24 ribosomal protein S24 -0.0190824
RAB1A RAB1A, member RAS oncogene family -0.0190376
FMN1 formin 1 -0.0187557
NCOA7 nuclear receptor coactivator 7 -0.0186915
OSMR oncostatin M receptor -0.0185941
IER3 immediate early response 3 -0.0185021
SLC44A1 solute carrier family 44 (choline transporter), member 1 -0.0184593
CLTC clathrin, heavy chain (Hc) -0.0182792
CENPF centromere protein F, 350/400kDa -0.0178751
RBM25 RNA binding motif protein 25 -0.0177597
ZMYND8 zinc finger, MYND-type containing 8 -0.0176516
RBM47 RNA binding motif protein 47 -0.0176077
STAU1 staufen double-stranded RNA binding protein 1 -0.0174822
VCL vinculin -0.0173764
KDM3A lysine (K)-specific demethylase 3A -0.0171664
RPS8 ribosomal protein S8 -0.0171539
AKAP9 A kinase (PRKA) anchor protein 9 -0.01703
CDK13 cyclin-dependent kinase 13 -0.0169234
MARCHF6 membrane associated ring-CH-type finger 6 -0.0168554
SPAG9 sperm associated antigen 9 -0.0166562
RPL26 ribosomal protein L26 -0.016592
COPA coatomer protein complex, subunit alpha -0.0165364
SCLT1 sodium channel and clathrin linker 1 -0.0164682
RBM39 RNA binding motif protein 39 -0.01643
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0164062
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0161118
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0161081
TUBB tubulin, beta class I -0.0159381
TXNRD1 thioredoxin reductase 1 -0.0159128
RPS27A ribosomal protein S27a -0.015898
LY6E lymphocyte antigen 6 complex, locus E -0.0158726