whole Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
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Genes

308 genes co-occuring with the biological term whole in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
ABCA4 ATP-binding cassette, sub-family A (ABC1), member 4
ABCG8 ATP-binding cassette, sub-family G (WHITE), member 8
ACACA acetyl-CoA carboxylase alpha
ACE angiotensin I converting enzyme
ACHE acetylcholinesterase (Yt blood group)
ACPP acid phosphatase, prostate
ACVRL1 activin A receptor type II-like 1
ADIPOQ adiponectin, C1Q and collagen domain containing
ADM adrenomedullin
ADRB2 adrenoceptor beta 2, surface
AGPAT2 1-acylglycerol-3-phosphate O-acyltransferase 2
AGR2 anterior gradient 2
ALB albumin
ALOX5 arachidonate 5-lipoxygenase
ANO10 anoctamin 10
APEX1 APEX nuclease (multifunctional DNA repair enzyme) 1
APOA5 apolipoprotein A-V
APOD apolipoprotein D
APOE apolipoprotein E
ARHGEF5 Rho guanine nucleotide exchange factor (GEF) 5
ATP2B3 ATPase, Ca++ transporting, plasma membrane 3
BAX BCL2-associated X protein
BDNF brain-derived neurotrophic factor
BIRC2 baculoviral IAP repeat containing 2
BMP7 bone morphogenetic protein 7
BRCA1 breast cancer 1, early onset
C1QA complement component 1, q subcomponent, A chain
C1QB complement component 1, q subcomponent, B chain
C1QC complement component 1, q subcomponent, C chain
C3 complement component 3
C4A complement component 4A (Rodgers blood group)
C4B complement component 4B (Chido blood group)
C5 complement component 5
C9 complement component 9
CAMP cathelicidin antimicrobial peptide
CCL2 chemokine (C-C motif) ligand 2
CD14 CD14 molecule
CD1C CD1c molecule
CD24 CD24 molecule
CD274 CD274 molecule
CD36 CD36 molecule (thrombospondin receptor)
CD40LG CD40 ligand
CD63 CD63 molecule
CD83 CD83 molecule
CDH1 cadherin 1, type 1, E-cadherin (epithelial)
CDH5 cadherin 5, type 2 (vascular endothelium)
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5
CFH complement factor H
CLC Charcot-Leyden crystal galectin
CLCN4 chloride channel, voltage-sensitive 4
CLEC4C C-type lectin domain family 4, member C
CLEC7A C-type lectin domain family 7, member A
CLOCK clock circadian regulator
CNTNAP2 contactin associated protein-like 2
COL4A1 collagen, type IV, alpha 1
COL4A2 collagen, type IV, alpha 2
CPB2 carboxypeptidase B2 (plasma)
CR1 complement component (3b/4b) receptor 1 (Knops blood group)
CRY2 cryptochrome circadian clock 2
CRYBA2 crystallin, beta A2
CTSC cathepsin C
CTSS cathepsin S
CXCL10 chemokine (C-X-C motif) ligand 10
CXCL8 chemokine (C-X-C motif) ligand 8
CXCR4 chemokine (C-X-C motif) receptor 4
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1
CYP21A2 cytochrome P450, family 21, subfamily A, polypeptide 2
CYP26B1 cytochrome P450, family 26, subfamily B, polypeptide 1
CYP2A6 cytochrome P450, family 2, subfamily A, polypeptide 6
CYP2D6 cytochrome P450, family 2, subfamily D, polypeptide 6
DDR2 discoidin domain receptor tyrosine kinase 2
DDX3X DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked
DFNB59 deafness, autosomal recessive 59
DGKE diacylglycerol kinase, epsilon 64kDa
DHDDS dehydrodolichyl diphosphate synthase
DMBT1 deleted in malignant brain tumors 1
DNAH5 dynein, axonemal, heavy chain 5
DRD2 dopamine receptor D2
DRD4 dopamine receptor D4
DRD5 dopamine receptor D5
DST dystonin
EDA ectodysplasin A
EGFR epidermal growth factor receptor
ERAP1 endoplasmic reticulum aminopeptidase 1
ERBB2 erb-b2 receptor tyrosine kinase 2
ERG v-ets avian erythroblastosis virus E26 oncogene homolog
ESR1 estrogen receptor 1
ESR2 estrogen receptor 2 (ER beta)
F11 coagulation factor XI
F12 coagulation factor XII (Hageman factor)
F13A1 coagulation factor XIII, A1 polypeptide
F2 coagulation factor II (thrombin)
F2R coagulation factor II (thrombin) receptor
F2RL3 coagulation factor II (thrombin) receptor-like 3
F3 coagulation factor III (thromboplastin, tissue factor)
F5 coagulation factor V (proaccelerin, labile factor)
F7 coagulation factor VII (serum prothrombin conversion accelerator)
F8 coagulation factor VIII, procoagulant component
FADS1 fatty acid desaturase 1
FADS2 fatty acid desaturase 2
FBP1 fructose-1,6-bisphosphatase 1
FCGR2A Fc fragment of IgG, low affinity IIa, receptor (CD32)
FCGR3A Fc fragment of IgG, low affinity IIIa, receptor (CD16a)
FCN3 ficolin (collagen/fibrinogen domain containing) 3
FGB fibrinogen beta chain
FGF18 fibroblast growth factor 18
FGF21 fibroblast growth factor 21
FGF23 fibroblast growth factor 23
FGFR1 fibroblast growth factor receptor 1
FH fumarate hydratase
FLNA filamin A, alpha
FRAXE fragile site, folic acid type, rare, fra(X)(q28) E
GABRE gamma-aminobutyric acid (GABA) A receptor, epsilon
GATA4 GATA binding protein 4
GDF5 growth differentiation factor 5
GHRL ghrelin/obestatin prepropeptide
GHSR growth hormone secretagogue receptor
GJB1 gap junction protein, beta 1, 32kDa
GJB2 gap junction protein, beta 2, 26kDa
GLO1 glyoxalase I
GNRHR gonadotropin-releasing hormone receptor
GP6 glycoprotein VI (platelet)
GRHL3 grainyhead-like 3 (Drosophila)
GRIK2 glutamate receptor, ionotropic, kainate 2
GRN granulin
GSK3B glycogen synthase kinase 3 beta
GSTM1 glutathione S-transferase mu 1
GSTP1 glutathione S-transferase pi 1
GSTT1 glutathione S-transferase theta 1
GZMB granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)
HAMP hepcidin antimicrobial peptide
HBA1 hemoglobin, alpha 1
HBE1 hemoglobin, epsilon 1
HCN4 hyperpolarization activated cyclic nucleotide gated potassium channel 4
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
HIST4H4 histone cluster 4, H4
HLA-DRB1 major histocompatibility complex, class II, DR beta 1
HNF1B HNF1 homeobox B
HRH2 histamine receptor H2
HRH4 histamine receptor H4
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1
HTRA1 HtrA serine peptidase 1
ICOS inducible T-cell co-stimulator
IFI27 interferon, alpha-inducible protein 27
IFNG interferon, gamma
IGHA1 immunoglobulin heavy constant alpha 1
IL10 interleukin 10
IL12B interleukin 12B
IL18 interleukin 18
IL1A interleukin 1, alpha
IL1B interleukin 1, beta
IL1RN interleukin 1 receptor antagonist
IL2RA interleukin 2 receptor, alpha
IL3RA interleukin 3 receptor, alpha (low affinity)
IL6 interleukin 6
IL7R interleukin 7 receptor
ITGAM integrin, alpha M (complement component 3 receptor 3 subunit)
ITGAV integrin, alpha V
ITGAX integrin, alpha X (complement component 3 receptor 4 subunit)
ITGB3 integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)
KCNC1 potassium channel, voltage gated Shaw related subfamily C, member 1
KCNC2 potassium channel, voltage gated Shaw related subfamily C, member 2
KCNC4 potassium channel, voltage gated Shaw related subfamily C, member 4
KCNH5 potassium channel, voltage gated eag related subfamily H, member 5
KCNQ1 potassium channel, voltage gated KQT-like subfamily Q, member 1
KEL Kell blood group, metallo-endopeptidase
KIAA0226 KIAA0226
KLK4 kallikrein-related peptidase 4
LEP leptin
LEPR leptin receptor
LRP4 low density lipoprotein receptor-related protein 4
LRRK2 leucine-rich repeat kinase 2
LTBP2 latent transforming growth factor beta binding protein 2
LY96 lymphocyte antigen 96
MAOA monoamine oxidase A
MAPK14 mitogen-activated protein kinase 14
MAPT microtubule-associated protein tau
MCAM melanoma cell adhesion molecule
MEN1 multiple endocrine neoplasia I
MIR1260A microRNA 1260a
MIR146A microRNA 146a
MIR155 microRNA 155
MIR186 microRNA 186
MIR21 microRNA 21
MIR223 microRNA 223
MIR26A1 microRNA 26a-1
MIR328 microRNA 328
MIR335 microRNA 335
MIR3651 microRNA 3651
MIR494 microRNA 494
MIR576 microRNA 576
MIR628 microRNA 628
MIR664A microRNA 664a
MITF microphthalmia-associated transcription factor
MMP13 matrix metallopeptidase 13
MMP9 matrix metallopeptidase 9
MPO myeloperoxidase
MPST mercaptopyruvate sulfurtransferase
MTHFR methylenetetrahydrofolate reductase (NAD(P)H)
MUC16 mucin 16, cell surface associated
MX1 MX dynamin-like GTPase 1
MYOC myocilin, trabecular meshwork inducible glucocorticoid response
MYP3 myopia 3 (high grade, autosomal dominant)
NAIP NLR family, apoptosis inhibitory protein
NEK2 NIMA-related kinase 2
NEWENTRY Record to support submission of GeneRIFs for a gene not in Gene (human; man).
NF1 neurofibromin 1
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1
NOS3 nitric oxide synthase 3 (endothelial cell)
NOTCH3 notch 3
NOX4 NADPH oxidase 4
NPAS2 neuronal PAS domain protein 2
NPPB natriuretic peptide B
NPY neuropeptide Y
NUP98 nucleoporin 98kDa
ODC1 ornithine decarboxylase 1
OLIG2 oligodendrocyte lineage transcription factor 2
OTC ornithine carbamoyltransferase
OTX2 orthodenticle homeobox 2
OXTR oxytocin receptor
PAX3 paired box 3
PCNA proliferating cell nuclear antigen
PDP1 pyruvate dehyrogenase phosphatase catalytic subunit 1
PDPN podoplanin
PECAM1 platelet/endothelial cell adhesion molecule 1
PER1 period circadian clock 1
PER2 period circadian clock 2
PGC progastricsin (pepsinogen C)
PGR progesterone receptor
PHOX2B paired-like homeobox 2b
PI3 peptidase inhibitor 3, skin-derived
PLAT plasminogen activator, tissue
PLEK2 pleckstrin 2
PLG plasminogen
PLIN2 perilipin 2
POU4F3 POU class 4 homeobox 3
PQBP1 polyglutamine binding protein 1
PTGER3 prostaglandin E receptor 3 (subtype EP3)
PTGER4 prostaglandin E receptor 4 (subtype EP4)
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
PTH parathyroid hormone
PVRL1 poliovirus receptor-related 1 (herpesvirus entry mediator C)
RAG1 recombination activating gene 1
RB1 retinoblastoma 1
RELN reelin
RORA RAR-related orphan receptor A
RPL22 ribosomal protein L22
RPSA ribosomal protein SA
RTN2 reticulon 2
RYR2 ryanodine receptor 2 (cardiac)
S100A9 S100 calcium binding protein A9
SACS sacsin molecular chaperone
SALL4 spalt-like transcription factor 4
SCD stearoyl-CoA desaturase (delta-9-desaturase)
SCN1A sodium channel, voltage gated, type I alpha subunit
SCN5A sodium channel, voltage gated, type V alpha subunit
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1
SH2D1A SH2 domain containing 1A
SHMT1 serine hydroxymethyltransferase 1 (soluble)
SIRT1 sirtuin 1
SLC22A5 solute carrier family 22 (organic cation/carnitine transporter), member 5
SLC25A22 solute carrier family 25 (mitochondrial carrier: glutamate), member 22
SLC2A4 solute carrier family 2 (facilitated glucose transporter), member 4
SNCA synuclein, alpha (non A4 component of amyloid precursor)
SOCS3 suppressor of cytokine signaling 3
SOD1 superoxide dismutase 1, soluble
SOD2 superoxide dismutase 2, mitochondrial
SOD3 superoxide dismutase 3, extracellular
SORL1 sortilin-related receptor, L(DLR class) A repeats containing
SOST sclerostin
SPP1 secreted phosphoprotein 1
SPTB spectrin, beta, erythrocytic
SREBF1 sterol regulatory element binding transcription factor 1
SREBF2 sterol regulatory element binding transcription factor 2
STAR steroidogenic acute regulatory protein
SYT1 synaptotagmin I
SYT14 synaptotagmin XIV
TARDBP TAR DNA binding protein
TENM1 teneurin transmembrane protein 1
TFAM transcription factor A, mitochondrial
TFF3 trefoil factor 3 (intestinal)
TGFBR1 transforming growth factor, beta receptor 1
TGM6 transglutaminase 6
THBD thrombomodulin
TLN1 talin 1
TLN2 talin 2
TLR2 toll-like receptor 2
TLR4 toll-like receptor 4
TLR7 toll-like receptor 7
TMPRSS2 transmembrane protease, serine 2
TNF tumor necrosis factor
TNFRSF10D tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain
TNFRSF1A tumor necrosis factor receptor superfamily, member 1A
TOP2A topoisomerase (DNA) II alpha 170kDa
TP53 tumor protein p53
TPM1 tropomyosin 1 (alpha)
TSHR thyroid stimulating hormone receptor
UGT1A1 UDP glucuronosyltransferase 1 family, polypeptide A1
UNG uracil-DNA glycosylase
VCL vinculin
VCP valosin containing protein
VEGFA vascular endothelial growth factor A
VHL von Hippel-Lindau tumor suppressor, E3 ubiquitin protein ligase
VPS54 vacuolar protein sorting 54 homolog (S. cerevisiae)
VWF von Willebrand factor
ZEB2 zinc finger E-box binding homeobox 2
ZFPM2 zinc finger protein, FOG family member 2