Harmonizome 3.0

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InterPro Resource

Description database of proteins annotated with functional terms, domains, and sites predicted by sequence analysis [temp short desc]
Citation(s)
  • Mitchell, A et al. (2015) The InterPro protein families database: the classification resource after 15 years. Nucleic Acids Res. 43:D213-21.
  • Apweiler, R et al. (2004) UniProt: the Universal Protein knowledgebase. Nucleic Acids Res. 32:D115-9.
  • UniProt, Consortium et al. (2015) UniProt: a hub for protein information. Nucleic Acids Res. 43:D204-12.
  • Apweiler, R et al. (2001) The InterPro database, an integrated documentation resource for protein families, domains and functional sites. Nucleic Acids Res. 29:37-40.
External Link http://www.ebi.ac.uk/interpro/

Datasets

Dataset Description Category Attribute Views
Predicted Protein Domain Annotations Protein domains predicted for gene products based on sequence similarity to known domain signatures structural or functional annotations protein domain 19770
  • Ma'ayan Laboratory of Computational Systems Biology
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Please acknowledge the Harmonizome in your publications by citing the following reference(s):

Diamant I, Clarke DJB, Evangelista JE, Lingam N, Ma'ayan A. Harmonizome 3.0: integrated knowledge about genes and proteins from diverse multi-omics resources. Nucleic Acids Res. 2024 Nov 20. pii: 53(1):D1016-D1028.

Rouillard AD, Gundersen GW, Fernandez NF, Wang Z, Monteiro CD, McDermott MG, Ma'ayan A. The harmonizome: a collection of processed datasets gathered to serve and mine knowledge about genes and proteins. Database (Oxford). 2016 Jul 3;2016. pii: baw100.