Heat Map with Input Genes
Select from the drop down menu to choose a dataset. Paste your gene list in the text box. Click submit to build a customized hierarchically clustered heat map visualization of the associations between your uploaded genes and the biological entities in your chosen dataset.
To place an upper bound on the size of the heat maps, which load more slowly as they grow larger, we have two restrictions:
Input gene list can have 500 genes maximum.
Only datasets with 200 or fewer gene sets can be visualized.
Dataset
(Please select a dataset)
BioGPS Cell Line Gene Expression Profiles
BioGPS Human Cell Type and Tissue Gene Expression Profiles
BioGPS Mouse Cell Type and Tissue Gene Expression Profiles
CHEA Transcription Factor Targets
COMPARTMENTS Experimental Protein Localization Evidence Scores
DEPOD Substrates of Phosphatases
ENCODE Transcription Factor Targets
GAD High Level Gene-Disease Associations
GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations
GTEx Tissue Gene Expression Profiles
Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles
HPA Cell Line Gene Expression Profiles
HPA Tissue Gene Expression Profiles
HPA Tissue Protein Expression Profiles
HPA Tissue Sample Gene Expression Profiles
HPM Cell Type and Tissue Protein Expression Profiles
JASPAR Predicted Transcription Factor Targets
KEGG Pathways
LINCS Kinativ Kinase Inhibitor Bioactivity Profiles
LINCS KinomeScan Kinase Inhibitor Targets
LOCATE Curated Protein Localization Annotations
MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations
PANTHER Pathways
ProteomicsDB Cell Type and Tissue Protein Expression Profiles
Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles
Roadmap Epigenomics Cell and Tissue Gene Expression Profiles
SILAC Phosphoproteomics Signatures of Differentially Phosphorylated Proteins for Drugs
SILAC Phosphoproteomics Signatures of Differentially Phosphorylated Proteins for Gene Perturbations
SILAC Phosphoproteomics Signatures of Differentially Phosphorylated Proteins for Protein Ligands
Virus MINT Protein-Viral Protein Interactions
Virus MINT Protein-Virus Interactions
LOCATE Predicted Protein Localization Annotations
PhosphoSitePlus Phosphosite-Disease Associations