Dataset UMAPs
Select from the drop down menu to explore an interactive UMAP visualization of the gene sets derived from a dataset. Gene set clusters are formed based on TF-IDF vectorization of their associated genes.
Dataset
(Please select a dataset)
Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles
CCLE Cell Line Proteomics
CellMarker Gene-Cell Type Associations
ChEA Transcription Factor Targets 2022
ClinVar Gene-Phenotype Associations 2025
CM4AI U2OS Cell Map Protein Localization Assemblies
COMPARTMENTS Curated Protein Localization Evidence Scores 2025
COMPARTMENTS Experimental Protein Localization Evidence Scores 2025
COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025
DeepCoverMOA Drug Mechanisms of Action
DepMap CRISPR Gene Dependency
DISEASES Curated Gene-Disease Association Evidence Scores 2025
DISEASES Experimental Gene-Disease Association Evidence Scores 2025
DISEASES Text-mining Gene-Disease Association Evidence Scores 2025
DisGeNET Gene-Disease Associations
DisGeNET Gene-Phenotype Associations
GlyGen Glycosylated Proteins
GO Biological Process Annotations 2023
GO Biological Process Annotations 2025
GO Cellular Component Annotations 2023
GO Cellular Component Annotations 2025
GO Molecular Function Annotations 2023
GO Molecular Function Annotations 2025
GTEx Tissue Gene Expression Profiles 2023
GTEx Tissue-Specific Aging Signatures
GWAS Catalog SNP-Phenotype Associations 2025
HuBMAP ASCT+B Annotations
HuBMAP ASCT+B Augmented with RNA-seq Coexpression
HuBMAP Azimuth Cell Type Annotations
IMPC Knockout Mouse Phenotypes
JASPAR Predicted Human Transcription Factor Targets 2025
JASPAR Predicted Mouse Transcription Factor Targets 2025
Kinase Library Serine Threonine Kinome Atlas
Kinase Library Tyrosine Kinome Atlas
KnockTF Gene Expression Profiles with Transcription Factor Perturbations
LINCS L1000 CMAP Chemical Perturbation Consensus Signatures
LINCS L1000 CMAP CRISPR Knockout Consensus Signatures
MGI Mouse Phenotype Associations 2023
MoTrPAC Rat Endurance Exercise Training
MW Enzyme Metabolite Associations
NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles
PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations
PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations
PFOCR Pathway Figure Associations 2023
PFOCR Pathway Figure Associations 2024
Reactome Pathways 2024
Replogle et al., Cell, 2022 K562 Essential Perturb-seq Gene Perturbation Signatures
Replogle et al., Cell, 2022 K562 Genome-wide Perturb-seq Gene Perturbation Signatures
Replogle et al., Cell, 2022 RPE1 Essential Perturb-seq Gene Perturbation Signatures
RummaGEO Drug Perturbation Signatures
RummaGEO Gene Perturbation Signatures
Sanger Dependency Map Cancer Cell Line Proteomics
Sci-Plex Drug Perturbation Signatures
SynGO Synaptic Gene Annotations
Tabula Sapiens Gene-Cell Associations
Tahoe Therapeutics Tahoe 100M Perturbation Atlas
TISSUES Curated Tissue Protein Expression Evidence Scores 2025
TISSUES Experimental Tissue Protein Expression Evidence Scores 2025
TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025
WikiPathways Pathways 2024