Interactive heatmap visualization of RNA-seq dataset GSE38393
Canned Analysis
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General Information
AccessionDCA00000097
TitleInteractive heatmap visualization of RNA-seq dataset GSE38393
DescriptionHighly interactive web-based heatmap visualization of the top 500 most variable genes in the GSE38393 RNA-seq dataset, as processed by ARCHS4.
Analysis URLanalysis/archs4?q=GSE38393_GPL11154
Upload DateSeptember 20, 2017
Uploadermaayanlab
Clustergrammer parameters
Gene Rank MethodVariance
Normalization AxisRows
Normalization MethodZ-Score
Top Genes500
Tools used in the analysis
Dataset Accession
Clustergrammer
Published October 2017
Web-based tool for visualizing and analyzing high-dimensional data as interactive and shareable heatmaps
4645
ARCHS4
Published September 2017
ARCHS4 provides access to gene counts from HiSeq 2000 and HiSeq 2500 platforms for human and mouse experiments from GEO ...
4645
Datasets used in the analysis
Keyword
Tool Name
GSE38393
Gene Expression Omnibus
Hi-seq 2000 sequencing facilitates quantitative analysis of transcriptomes in LNCaP cells with or without SiGATA2 treatment.
1
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