Small molecules which mimic Turner syndrome
Canned Analysis
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General Information
AccessionDCA00009416
TitleSmall molecules which mimic Turner syndrome
DescriptionThe L1000 database was queried in order to identify small molecule perturbations which mimic the Turner syndrome gene expression signature in the amniotic fluid cell type.
Analysis URLhttp://amp.pharm.mssm.edu/L1000CDS2/#/result/58d1c597e467bea600fb877e
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis CuratorMicrotaskManic
CREEDS IDdz:1059
Cell Typeamniotic fluid
DO IDDOID:3491
Disease NameTurner syndrome
Organismhuman
UMLS CUIC1527168
L1000CDS2 parameters
Directionmimic
Characteristic Direction parameters
Control SamplesGSM1411026, GSM1411027, GSM1411028, GSM1411029, GSM1411030
Perturbed SamplesGSM1411021, GSM1411022, GSM1411023, GSM1411024, GSM1411025
Tools used in the analysis
Dataset Accession
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
L1000CDS2
Published August 2016
An ultra-fast LINCS L1000 Characteristic Direction signature search engine
7756
Datasets used in the analysis
Keyword
Tool Name
GSE58435
Gene Expression Omnibus
Turner syndrome: second trimester amniotic fluid
7
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