Small molecules which mimic breast adenocarcinoma
Canned Analysis
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General Information
AccessionDCA00009436
TitleSmall molecules which mimic breast adenocarcinoma
DescriptionThe L1000 database was queried in order to identify small molecule perturbations which mimic the breast adenocarcinoma gene expression signature in the Breast epithelium cell type.
Analysis URLhttp://amp.pharm.mssm.edu/L1000CDS2/#/result/58d1c2b5e467bea600fb8616
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorcadimo
CREEDS IDdz:1071
Cell TypeBreast epithelium
DO IDDOID:3458
Disease Namebreast adenocarcinoma
Organismhuman
UMLS CUIC0858252
L1000CDS2 parameters
Directionmimic
Characteristic Direction parameters
Control SamplesGSM1501820, GSM1501849, GSM1501865, GSM1501879
Perturbed SamplesGSM1501818, GSM1501819, GSM1501821, GSM1501822, GSM1501823, GSM1501824, GSM1501825, GSM1501826, GSM1501827, GSM1501828, GSM1501829, GSM1501830, GSM1501831, GSM1501832, GSM1501833, GSM1501834, GSM1501835, GSM1501836, GSM1501837, GSM1501838, GSM1501839, GSM
Tools used in the analysis
Dataset Accession
L1000CDS2
Published August 2016
An ultra-fast LINCS L1000 Characteristic Direction signature search engine
7756
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE61304
Gene Expression Omnibus
Novel bio-marker discovery for stratification and prognosis of breast cancer patients
7
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