Small molecules which mimic breast cancer
Canned Analysis
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General Information
AccessionDCA00009732
TitleSmall molecules which mimic breast cancer
DescriptionThe L1000 database was queried in order to identify small molecule perturbations which mimic the breast cancer gene expression signature in the Sections from non-Basal Like Cancer specimens cell type.
Analysis URLhttp://amp.pharm.mssm.edu/L1000CDS2/#/result/58d1b9fde467bea600fb81ce
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorcadimo
CREEDS IDdz:978
Cell TypeSections from non-Basal Like Cancer specimens
DO IDDOID:1612
Disease Namebreast cancer
Organismhuman
UMLS CUIC1458155
L1000CDS2 parameters
Directionmimic
Characteristic Direction parameters
Control SamplesGSM85513, GSM85514, GSM85515, GSM85516, GSM85517, GSM85518, GSM85519
Perturbed SamplesGSM85493, GSM85494, GSM85495, GSM85496, GSM85497, GSM85498, GSM85499, GSM85500, GSM85501, GSM85502, GSM85503, GSM85504, GSM85505, GSM85506, GSM85507, GSM85508, GSM85509, GSM85510, GSM85511, GSM85512
Tools used in the analysis
Dataset Accession
L1000CDS2
Published August 2016
An ultra-fast LINCS L1000 Characteristic Direction signature search engine
7756
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE3744
Gene Expression Omnibus
Basal-like breast cancer tumors
21
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