Small molecules which mimic Vitamin E Deficiency
Canned Analysis
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General Information
AccessionDCA00009868
TitleSmall molecules which mimic Vitamin E Deficiency
DescriptionThe L1000 database was queried in order to identify small molecule perturbations which mimic the Vitamin E Deficiency gene expression signature in the Intestine - Large Intestine - Colon (MMHCC) cell type.
Analysis URLhttp://amp.pharm.mssm.edu/L1000CDS2/#/result/58d1cba9e467bea600fb8a88
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis CuratorJoel.Dudley
CREEDS IDdz:316
Cell TypeIntestine - Large Intestine - Colon (MMHCC)
Disease NameVitamin E Deficiency
Organismrat
UMLS CUIC0042875
L1000CDS2 parameters
Directionmimic
Characteristic Direction parameters
Control SamplesGSM17216, GSM17217, GSM17218, GSM17219, GSM17220
Perturbed SamplesGSM17221, GSM17222, GSM17223, GSM17224, GSM17225
Tools used in the analysis
Dataset Accession
L1000CDS2
Published August 2016
An ultra-fast LINCS L1000 Characteristic Direction signature search engine
7756
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE1063
Gene Expression Omnibus
Vitamin E deficiency effect on distal colon
7
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