Small molecules which mimic hepatocellular carcinoma
Canned Analysis
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General Information
AccessionDCA00009898
TitleSmall molecules which mimic hepatocellular carcinoma
DescriptionThe L1000 database was queried in order to identify small molecule perturbations which mimic the hepatocellular carcinoma gene expression signature in the Hepatic Tissue cell type.
Analysis URLhttp://amp.pharm.mssm.edu/L1000CDS2/#/result/58d1c527e467bea600fb8746
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis CuratorJoel.Dudley
CREEDS IDdz:333
Cell TypeHepatic Tissue
DO IDDOID:684
Disease Namehepatocellular carcinoma
Organismrat
UMLS CUIC0019204
L1000CDS2 parameters
Directionmimic
Characteristic Direction parameters
Control SamplesGSM35168, GSM35169, GSM35170, GSM35171, GSM35172
Perturbed SamplesGSM35178, GSM35179, GSM35180, GSM35181, GSM35182
Tools used in the analysis
Dataset Accession
L1000CDS2
Published August 2016
An ultra-fast LINCS L1000 Characteristic Direction signature search engine
7756
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE1946
Gene Expression Omnibus
Hepatocellular carcinoma induced by choline-deficient L-amino acid-defined diet
7
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