Small molecules which mimic Escherichia coli infection of the central nervous system
Canned Analysis
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General Information
AccessionDCA00009908
TitleSmall molecules which mimic Escherichia coli infection of the central nervous system
DescriptionThe L1000 database was queried in order to identify small molecule perturbations which mimic the Escherichia coli infection of the central nervous system gene expression signature in the CNS - Brain (MMHCC) cell type.
Analysis URLhttp://amp.pharm.mssm.edu/L1000CDS2/#/result/58d1c325e467bea600fb864e
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis CuratorJoel.Dudley
CREEDS IDdz:341
Cell TypeCNS - Brain (MMHCC)
Disease NameEscherichia coli infection of the central nervous system
Organismmouse
UMLS CUIC1320188
L1000CDS2 parameters
Directionmimic
Characteristic Direction parameters
Control SamplesGSM73001, GSM73002, GSM73014, GSM73015, GSM73016, GSM73017
Perturbed SamplesGSM72507, GSM73000, GSM73018, GSM73019, GSM73340, GSM73341
Tools used in the analysis
Dataset Accession
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
L1000CDS2
Published August 2016
An ultra-fast LINCS L1000 Characteristic Direction signature search engine
7756
Datasets used in the analysis
Keyword
Tool Name
GSE3253
Gene Expression Omnibus
Age effect on lipopolysaccharide-induced neuroinflammation and sickness behavior
7
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