Small molecules which mimic skin squamous cell carcinoma
Canned Analysis
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General Information
AccessionDCA00009930
TitleSmall molecules which mimic skin squamous cell carcinoma
DescriptionThe L1000 database was queried in order to identify small molecule perturbations which mimic the skin squamous cell carcinoma gene expression signature in the Normal skin and squamous cell carcinoma (SCC) tumor biopsies cell type.
Analysis URLhttp://amp.pharm.mssm.edu/L1000CDS2/#/result/58d1ce3de467bea600fb8bcc
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorcadimo
CREEDS IDdz:627
Cell TypeNormal skin and squamous cell carcinoma (SCC) tumor biopsies
DO IDDOID:3151
Disease Nameskin squamous cell carcinoma
Organismhuman
UMLS CUIC0553723
L1000CDS2 parameters
Directionmimic
Characteristic Direction parameters
Control SamplesGSM47616, GSM47617, GSM47618, GSM47619, GSM47620, GSM47621
Perturbed SamplesGSM47622, GSM47623, GSM47624, GSM47625, GSM47626
Tools used in the analysis
Dataset Accession
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
L1000CDS2
Published August 2016
An ultra-fast LINCS L1000 Characteristic Direction signature search engine
7756
Datasets used in the analysis
Keyword
Tool Name
GSE2503
Gene Expression Omnibus
Non-melanoma skin cancer
19
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