Small molecules which reverse hepatocellular carcinoma
Canned Analysis
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General Information
AccessionDCA00010029
TitleSmall molecules which reverse hepatocellular carcinoma
DescriptionThe L1000 database was queried in order to identify small molecule perturbations which reverse the hepatocellular carcinoma gene expression signature in the Liver cell type.
Analysis URLhttp://amp.pharm.mssm.edu/L1000CDS2/#/result/58d1cb9ee467bea600fb8a82
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis CuratorJoel.Dudley
CREEDS IDdz:407
Cell TypeLiver
DO IDDOID:684
Disease Namehepatocellular carcinoma
Organismhuman
UMLS CUIC0019204
L1000CDS2 parameters
Directionreverse
Characteristic Direction parameters
Control SamplesGSM155919, GSM155926, GSM155927, GSM155928, GSM155947, GSM155948, GSM155961, GSM155964, GSM155988, GSM155989
Perturbed SamplesGSM155932, GSM155933, GSM155934, GSM155935, GSM155936, GSM155937, GSM155938, GSM155939, GSM155940, GSM155941, GSM155942, GSM155943, GSM155944, GSM155945, GSM155946, GSM155949, GSM155950, GSM155953, GSM155954, GSM155955, GSM155956, GSM155957, GSM155958, GS
Tools used in the analysis
Dataset Accession
L1000CDS2
Published August 2016
An ultra-fast LINCS L1000 Characteristic Direction signature search engine
7756
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE6764
Gene Expression Omnibus
Genome-wide molecular profiles of HCV-induced dysplasia and hepatocellular carcinoma
7
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