Small molecules which mimic Human immunodeficiency virus infectious disease
Canned Analysis
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General Information
AccessionDCA00010046
TitleSmall molecules which mimic Human immunodeficiency virus infectious disease
DescriptionThe L1000 database was queried in order to identify small molecule perturbations which mimic the Human immunodeficiency virus infectious disease gene expression signature in the T lymphocyte cell type.
Analysis URLhttp://amp.pharm.mssm.edu/L1000CDS2/#/result/58d1cd72e467bea600fb8b68
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis CuratorJoel.Dudley
CREEDS IDdz:419
Cell TypeT lymphocyte
DO IDDOID:526
Disease NameHuman immunodeficiency virus infectious disease
Organismhuman
UMLS CUIC0019693
L1000CDS2 parameters
Directionmimic
Characteristic Direction parameters
Control SamplesGSM155228, GSM155229, GSM155230, GSM155232, GSM155233, GSM155234, GSM155235, GSM155236, GSM155237, GSM155238
Perturbed SamplesGSM154936, GSM155179, GSM155180, GSM155181, GSM155182, GSM155183, GSM155184, GSM155185, GSM155186, GSM155187, GSM155189, GSM155190, GSM155192, GSM155195, GSM155200, GSM155201, GSM155202, GSM155203, GSM155204, GSM155206, GSM155218, GSM155219, GSM155220, GS
Tools used in the analysis
Dataset Accession
L1000CDS2
Published August 2016
An ultra-fast LINCS L1000 Characteristic Direction signature search engine
7756
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE6740
Gene Expression Omnibus
HIV infection effect on CD4+ and CD8+ T cells
7
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