Small molecules which mimic Barrett's esophagus
Canned Analysis
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General Information
AccessionDCA00010118
TitleSmall molecules which mimic Barrett's esophagus
DescriptionThe L1000 database was queried in order to identify small molecule perturbations which mimic the Barrett's esophagus gene expression signature in the esophagus cell type.
Analysis URLhttp://amp.pharm.mssm.edu/L1000CDS2/#/result/58d1c4efe467bea600fb872a
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorgaribr01
CREEDS IDdz:453
Cell Typeesophagus
DO IDDOID:9206
Disease NameBarrett's esophagus
Organismhuman
UMLS CUIC0004763
L1000CDS2 parameters
Directionmimic
Characteristic Direction parameters
Control SamplesGSM851995, GSM851996, GSM851997, GSM851998, GSM851999
Perturbed SamplesGSM851986, GSM851987, GSM851988, GSM851989, GSM851990
Tools used in the analysis
Dataset Accession
L1000CDS2
Published August 2016
An ultra-fast LINCS L1000 Characteristic Direction signature search engine
7756
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE34619
Gene Expression Omnibus
Barrett esophagus: endoscopic biopsies
14
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