Small molecules which mimic Barrett's esophagus
Canned Analysis
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General Information
AccessionDCA00010120
TitleSmall molecules which mimic Barrett's esophagus
DescriptionThe L1000 database was queried in order to identify small molecule perturbations which mimic the Barrett's esophagus gene expression signature in the Esopahgus endoscopic biopsies cell type.
Analysis URLhttp://amp.pharm.mssm.edu/L1000CDS2/#/result/58d1bba4e467bea600fb82a2
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorcadimo
CREEDS IDdz:596
Cell TypeEsopahgus endoscopic biopsies
DO IDDOID:9206
Disease NameBarrett's esophagus
Organismhuman
UMLS CUIC0004763
L1000CDS2 parameters
Directionmimic
Characteristic Direction parameters
Control SamplesGSM851993, GSM851994, GSM851995, GSM851996, GSM851997, GSM851998, GSM851999, GSM852000
Perturbed SamplesGSM851983, GSM851984, GSM851985, GSM851986, GSM851987, GSM851988, GSM851989, GSM851990, GSM851991, GSM851992
Tools used in the analysis
Dataset Accession
L1000CDS2
Published August 2016
An ultra-fast LINCS L1000 Characteristic Direction signature search engine
7756
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE34619
Gene Expression Omnibus
Barrett esophagus: endoscopic biopsies
14
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