Small molecules which reverse head and neck squamous cell carcinoma
Canned Analysis
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General Information
AccessionDCA00010135
TitleSmall molecules which reverse head and neck squamous cell carcinoma
DescriptionThe L1000 database was queried in order to identify small molecule perturbations which reverse the head and neck squamous cell carcinoma gene expression signature in the Head and Neck Squamous Cell (Normal vs. Tumor) cell type.
Analysis URLhttp://amp.pharm.mssm.edu/L1000CDS2/#/result/58d1c1e0e467bea600fb85b4
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatortimkenny92
CREEDS IDdz:458
Cell TypeHead and Neck Squamous Cell (Normal vs. Tumor)
DO IDDOID:5520
Disease Namehead and neck squamous cell carcinoma
Organismhuman
UMLS CUIC1168401
L1000CDS2 parameters
Directionreverse
Characteristic Direction parameters
Control SamplesGSM153813, GSM153815, GSM153817, GSM153819, GSM153821, GSM153823, GSM153825, GSM153827, GSM153829, GSM153831, GSM153833, GSM153835, GSM153837, GSM153839, GSM153841, GSM153843, GSM153845, GSM153847, GSM153849, GSM153851, GSM153853, GSM153855
Perturbed SamplesGSM153814, GSM153816, GSM153818, GSM153820, GSM153822, GSM153824, GSM153826, GSM153828, GSM153830, GSM153832, GSM153834, GSM153836, GSM153838, GSM153840, GSM153842, GSM153844, GSM153846, GSM153848, GSM153850, GSM153852, GSM153854, GSM153856
Tools used in the analysis
Dataset Accession
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
L1000CDS2
Published August 2016
An ultra-fast LINCS L1000 Characteristic Direction signature search engine
7756
Datasets used in the analysis
Keyword
Tool Name
GSE6631
Gene Expression Omnibus
Head and neck squamous cell carcinoma
7
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