Small molecules which mimic hepatocellular carcinoma
Canned Analysis
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General Information
AccessionDCA00010322
TitleSmall molecules which mimic hepatocellular carcinoma
DescriptionThe L1000 database was queried in order to identify small molecule perturbations which mimic the hepatocellular carcinoma gene expression signature in the Peripheral blood mononuclear cells cell type.
Analysis URLhttp://amp.pharm.mssm.edu/L1000CDS2/#/result/58d1bf21e467bea600fb845e
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorcadimo
CREEDS IDdz:554
Cell TypePeripheral blood mononuclear cells
DO IDDOID:684
Disease Namehepatocellular carcinoma
Organismhuman
UMLS CUIC0279607
L1000CDS2 parameters
Directionmimic
Characteristic Direction parameters
Control SamplesGSM1200304, GSM1200305, GSM1200306, GSM1200307, GSM1200308, GSM1200309, GSM1200310, GSM1200311, GSM1200312, GSM1200313
Perturbed SamplesGSM1200294, GSM1200295, GSM1200296, GSM1200297, GSM1200298, GSM1200299, GSM1200300, GSM1200301, GSM1200302, GSM1200303
Tools used in the analysis
Dataset Accession
L1000CDS2
Published August 2016
An ultra-fast LINCS L1000 Characteristic Direction signature search engine
7756
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE49515
Gene Expression Omnibus
Hepatocellular carcinoma: peripheral blood mononuclear cells
21
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