Small molecules which mimic colorectal adenocarcinoma
Canned Analysis
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General Information
AccessionDCA00010394
TitleSmall molecules which mimic colorectal adenocarcinoma
DescriptionThe L1000 database was queried in order to identify small molecule perturbations which mimic the colorectal adenocarcinoma gene expression signature in the Colon mucosa - colorectal adenocarcinomas with microsatellite instability (MSI CRCs) cell type.
Analysis URLhttp://amp.pharm.mssm.edu/L1000CDS2/#/result/58d1bad9e467bea600fb823e
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorcadimo
CREEDS IDdz:595
Cell TypeColon mucosa - colorectal adenocarcinomas with microsatellite instability (MSI CRCs)
DO IDDOID:0050861
Disease Namecolorectal adenocarcinoma
Organismhuman
L1000CDS2 parameters
Directionmimic
Characteristic Direction parameters
Control SamplesGSM604518, GSM604519, GSM604520, GSM604521, GSM604522, GSM604523, GSM604524, GSM604525, GSM604526, GSM604527, GSM604528, GSM604529, GSM604530, GSM604531, GSM604532
Perturbed SamplesGSM604484, GSM604485, GSM604486, GSM604487, GSM604488, GSM604489, GSM604490, GSM604491, GSM604492, GSM604493, GSM604494, GSM604495, GSM604496, GSM604497, GSM604498, GSM604499, GSM604500, GSM604501, GSM604502, GSM604503, GSM604504, GSM604505, GSM604506, GS
Tools used in the analysis
Dataset Accession
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
L1000CDS2
Published August 2016
An ultra-fast LINCS L1000 Characteristic Direction signature search engine
7756
Datasets used in the analysis
Keyword
Tool Name
GSE24514
Gene Expression Omnibus
Microsatellite-unstable colorectal cancer
7
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