Small molecules which reverse nasopharynx carcinoma
Canned Analysis
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General Information
AccessionDCA00010433
TitleSmall molecules which reverse nasopharynx carcinoma
DescriptionThe L1000 database was queried in order to identify small molecule perturbations which reverse the nasopharynx carcinoma gene expression signature in the Nasopharyngeal biopsies (with Epstein-Barr virus (EBV)-positive undifferentiated NPC) cell type.
Analysis URLhttp://amp.pharm.mssm.edu/L1000CDS2/#/result/58d1c8e8e467bea600fb892a
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorcadimo
CREEDS IDdz:613
Cell TypeNasopharyngeal biopsies (with Epstein-Barr virus (EBV)-positive undifferentiated NPC)
DO IDDOID:9261
Disease Namenasopharynx carcinoma
Organismhuman
UMLS CUIC0238301
L1000CDS2 parameters
Directionreverse
Characteristic Direction parameters
Control SamplesGSM342152, GSM342153, GSM342154
Perturbed SamplesGSM342155, GSM342156, GSM342157, GSM342158, GSM342159, GSM342160, GSM342161, GSM342162, GSM342163, GSM342164, GSM342165, GSM342166, GSM342167, GSM342168, GSM342169, GSM342170, GSM342171, GSM342172, GSM342173, GSM342174, GSM342175, GSM342176, GSM342177, GS
Tools used in the analysis
Dataset Accession
L1000CDS2
Published August 2016
An ultra-fast LINCS L1000 Characteristic Direction signature search engine
7756
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE13597
Gene Expression Omnibus
Nasopharyngeal carcinoma
14
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