Small molecules which mimic in situ carcinoma
Canned Analysis
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General Information
AccessionDCA00010472
TitleSmall molecules which mimic in situ carcinoma
DescriptionThe L1000 database was queried in order to identify small molecule perturbations which mimic the in situ carcinoma gene expression signature in the Normal urothelium cells and CIS cells cell type.
Analysis URLhttp://amp.pharm.mssm.edu/L1000CDS2/#/result/58d1d025e467bea600fb8ca8
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorcadimo
CREEDS IDdz:655
Cell TypeNormal urothelium cells and CIS cells
DO IDDOID:8719
Disease Namein situ carcinoma
Organismmouse
UMLS CUIC0007099
L1000CDS2 parameters
Directionmimic
Characteristic Direction parameters
Control SamplesGSM1579325, GSM1579326
Perturbed SamplesGSM1579327, GSM1579328
Tools used in the analysis
Dataset Accession
L1000CDS2
Published August 2016
An ultra-fast LINCS L1000 Characteristic Direction signature search engine
7756
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE64756
Gene Expression Omnibus
Gene expression data from transgenic and knockout mice
7
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