Small molecules which reverse hepatocellular carcinoma
Canned Analysis
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General Information
AccessionDCA00010475
TitleSmall molecules which reverse hepatocellular carcinoma
DescriptionThe L1000 database was queried in order to identify small molecule perturbations which reverse the hepatocellular carcinoma gene expression signature in the Hepatocellular carcinoma and Adjacent non-tumorous liver tissues cell type.
Analysis URLhttp://amp.pharm.mssm.edu/L1000CDS2/#/result/58d1d01ee467bea600fb8ca6
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorcadimo
CREEDS IDdz:656
Cell TypeHepatocellular carcinoma and Adjacent non-tumorous liver tissues
DO IDDOID:684
Disease Namehepatocellular carcinoma
Organismhuman
UMLS CUIC0279607
L1000CDS2 parameters
Directionreverse
Characteristic Direction parameters
Control SamplesGSM1481292, GSM1481294, GSM1481296, GSM1481298, GSM1481300, GSM1481302, GSM1481304, GSM1481306, GSM1481308, GSM1481310, GSM1481312, GSM1481314, GSM1481316, GSM1481318, GSM1481320, GSM1481322, GSM1481324, GSM1481326
Perturbed SamplesGSM1481293, GSM1481295, GSM1481297, GSM1481299, GSM1481301, GSM1481303, GSM1481305, GSM1481307, GSM1481309, GSM1481311, GSM1481313, GSM1481315, GSM1481317, GSM1481319, GSM1481321, GSM1481323, GSM1481325, GSM1481327
Tools used in the analysis
Dataset Accession
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
L1000CDS2
Published August 2016
An ultra-fast LINCS L1000 Characteristic Direction signature search engine
7756
Datasets used in the analysis
Keyword
Tool Name
GSE60502
Gene Expression Omnibus
Gene expression profiling of 18 hepatocellular carcinoma and adjacent non-tumorous liver tissue
7
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