Small molecules which mimic hepatocellular carcinoma
Canned Analysis
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General Information
AccessionDCA00010482
TitleSmall molecules which mimic hepatocellular carcinoma
DescriptionThe L1000 database was queried in order to identify small molecule perturbations which mimic the hepatocellular carcinoma gene expression signature in the Tumor tissues and Adjacent non-tumorous tissues of Hepatocellular Carcinoma cell type.
Analysis URLhttp://amp.pharm.mssm.edu/L1000CDS2/#/result/58d1c74fe467bea600fb885a
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorcadimo
CREEDS IDdz:660
Cell TypeTumor tissues and Adjacent non-tumorous tissues of Hepatocellular Carcinoma
DO IDDOID:684
Disease Namehepatocellular carcinoma
Organismhuman
UMLS CUIC0279607
L1000CDS2 parameters
Directionmimic
Characteristic Direction parameters
Control SamplesGSM1398646, GSM1398648, GSM1398650, GSM1398652, GSM1398654, GSM1398656, GSM1398658, GSM1398660, GSM1398662, GSM1398664, GSM1398666, GSM1398668, GSM1398670, GSM1398672, GSM1398674, GSM1398676, GSM1398678, GSM1398680, GSM1398682, GSM1398684, GSM1398686, GSM
Perturbed SamplesGSM1398645, GSM1398647, GSM1398649, GSM1398651, GSM1398653, GSM1398655, GSM1398657, GSM1398659, GSM1398661, GSM1398663, GSM1398665, GSM1398667, GSM1398669, GSM1398671, GSM1398673, GSM1398675, GSM1398677, GSM1398679, GSM1398681, GSM1398683, GSM1398685, GSM
Tools used in the analysis
Dataset Accession
L1000CDS2
Published August 2016
An ultra-fast LINCS L1000 Characteristic Direction signature search engine
7756
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE57957
Gene Expression Omnibus
Expression profile of Hepatocellular Carcinoma
7
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